Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g00060 | ATGGCTGATGCTGAGGATATCCAGCCACTTGTCTGCGACAATGGAACCGGAATGGTGAAGGCTGGATTTGCCGGCGATGATGCTCCCAGGGCAGTGTTTCCAAGTATTGTTGGTCGACCTCGACATACTGGTGTCATGGTGGGTATGGGCCAGAAAGATGCTTATGTTGGTGACGAGGCCCAATCCAAAAGAGGTATTCTTACTTTGAAATATCCCATTGAGCATGGTATTGTCAGCAACTGGGATGATATGGAAAAGATTTGGCATCACACATTCTACAATGAGCTTCGTGTTGCACCTGAAGAACACCCAGTTCTTCTCACTGAAGCTCCTCTCAATCCTAAAGCCAACAGAGAAAAGATGACACAAATCATGTTTGAAACTTTTAATGTACCTGCCATGTATGTTGCCATCCAGGCCGTCCTATCACTGTATGCCAGTGGTCGTACAACAGGTATCGTGCTCGACTCTGGTGATGGTGTGAGTCATACTGTGCCAATCTATGAGGGTTATGCTCTTCCCCATGCTATCCTCCGTCTCGACCTTGCTGGTCGTGATCTAACTGATGCTTTGATGAAGATTCTCACTGAGAGAGGGTACATGTTCACAACCACTGCCGAACGGGAAATTGTTCGTGACATGAAAGAGAAGCTTGCTTATGTTGCACTCGACTATGAGCAGGAACTTGAGACTGCTAAGAGTAGCTCCTCAATTGAGAAGAACTATGAACTGCCCGATGGACAAGTCATCACAATTGGAGCTGAGAGATTCCGTTGCCCCGAAGTTCTTTTCCAGCCATCCCTCATCGGAATGGAAGCTGCTGGAATCCACGAGACTACCTACAACTCAATCATGAAGTGTGATGTGGATATCAGAAAAGATTTGTATGGCAACATTGTTCTCAGTGGTGGTTCTACCATGTTCCCTGGTATCGCTGACCGTATGAGCAAAGAGATCACAGCTCTTGCTCCCAGCAGCATGAAAATCAAGGTCGTTGCACCACCAGAAAGGAAATACAGTGTCTGGATTGGAGGATCCATCCTTGCATCGCTCAGTACCTTCCAGCAGGCGAGAGATACTCCCCTCATTTACCACGTAATCTCTCTTTTGTTCTCATTTCTCGCACTAATACTCTTTGTTTTACCAGATGTGGATCTCAAAGGGTGA | 1167 | 46.62 | MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQARDTPLIYHVISLLFSFLALILFVLPDVDLKG* | 389 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 639147 | 640564 | + | Chy11G186400.1 | Chy11g00060 | 235821 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g00060 | 388 | Gene3D | - | 140 | 340 | - | - | |
Chy11g00060 | 388 | SMART | actin_3 | 7 | 374 | IPR004000 | - | |
Chy11g00060 | 388 | ProSitePatterns | Actins and actin-related proteins signature. | 106 | 118 | IPR020902 | - | |
Chy11g00060 | 388 | Gene3D | Actin; Chain A, domain 4 | 182 | 273 | - | - | |
Chy11g00060 | 388 | Pfam | Actin | 5 | 357 | IPR004000 | - | |
Chy11g00060 | 388 | Gene3D | - | 10 | 357 | - | - | |
Chy11g00060 | 388 | PRINTS | Actin signature | 63 | 85 | IPR004000 | - | |
Chy11g00060 | 388 | PRINTS | Actin signature | 142 | 161 | IPR004000 | - | |
Chy11g00060 | 388 | PRINTS | Actin signature | 51 | 62 | IPR004000 | - | |
Chy11g00060 | 388 | PRINTS | Actin signature | 117 | 130 | IPR004000 | - | |
Chy11g00060 | 388 | PRINTS | Actin signature | 28 | 37 | IPR004000 | - | |
Chy11g00060 | 388 | PRINTS | Actin signature | 238 | 254 | IPR004000 | - | |
Chy11g00060 | 388 | SUPERFAMILY | Actin-like ATPase domain | 149 | 357 | IPR043129 | - | |
Chy11g00060 | 388 | PANTHER | ACTIN | 1 | 357 | IPR004000 | - | |
Chy11g00060 | 388 | SUPERFAMILY | Actin-like ATPase domain | 6 | 155 | IPR043129 | - | |
Chy11g00060 | 388 | CDD | NBD_sugar-kinase_HSP70_actin | 10 | 183 | - | - | |
Chy11g00060 | 388 | PANTHER | ACTIN | 1 | 357 | - | - | |
Chy11g00060 | 388 | ProSitePatterns | Actins signature 1. | 55 | 65 | IPR004001 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy08g00757 | Chy-Chr8:15277610 | Chy11g00060 | Chy-Chr11:639147 | 0 | dispersed | |
Chy10g00547 | Chy-Chr10:12097906 | Chy11g00060 | Chy-Chr11:639147 | 0 | dispersed | |
Chy02g02375 | Chy-Chr2:27575528 | Chy11g00060 | Chy-Chr11:639147 | 1.50E-08 | transposed | |
Chy10g00822 | Chy-Chr10:14179138 | Chy11g00060 | Chy-Chr11:639147 | 5.57E-63 | transposed | |
Chy11g00060 | Chy-Chr11:639147 | Chy02g01031 | Chy-Chr2:7030507 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g00060 | K10355 | - | csv:101215469 | 711.835 |