Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00065 ATGTTTTTGCTTTCAAAGGCAGCATTCAACGCCGGAATGAACCATTATGTCTATATCTTTTATCGCCAGGTCGCCGCCACTGTCTTCCTTTCTCCTTTCGCCTTTTTTCGATGTTATACCGATCACGTTAGGATAGCCATATGTTTAAATTTGTATGGAATTGCTCTCGTGTACACGTCAGCAACATTGGCTGCAGCAACTGCCAATTGTCTTCCTGTCATCACCTTCTTTGTCGCGCTTTTATTTAGGATGGAGGTGTTGAGGTTGAAGTCAATAGCAGGAGCTGCAAAGCTAGCAGGAATATTATTTTGCATTGGTGGTGTTGGGATTGTGGCATTTTACAAAGGCCCCCAATTGAATTTGTTTAACAATCACCATCATCTCCTTTCTATCCATAAACCTAATAATAATCACCATTCTTCTTCTCTTCCATTGACGAATAACTCTTGGTTGATGGGTTGCTTTTTGATGCTATCTTCCAATACCTTATGGAGTGTTTGGGTTGTTCTTCAGGCAATGGTATTGAAAAGCTATTCTTCGAAGCTTCAATTGACAAATCTTCAATGTTTATTAAGTTCATTTCAATCATTTGGTATTGCCATTGCAATGGAAAGACAACCTCATAAATGGAAACTTGGTTGGAATCTTCAGCTTCTTGCAGTCATATATTGTGGCATGATGACTGCGGTTACGTTTTGTCTTCAAGTTTGGGTTATTGAGAAGAAAGGACCTGTTTATTTAGCCATGTCAACCCCTTTGGCTCTTATCATCACAGCCTTCTTTTCTGCTATATTTCTTGGTGAGAGTATCACTCTTGGAAGTACTTTAGGGGGAATGTTGTTGGTGGGAGGGCTGTATTTTGTGCTATGGGGAAAGAGCAAAGAGCAAACAATAAGTGACGCATTGAAAGAAGGTACCAAAGAAGGCAACATGGAAGAAGGGAAATATATCACTAAATCAGACAATGAAAATATGGCATCTCTTTAG 987 39.61 MFLLSKAAFNAGMNHYVYIFYRQVAATVFLSPFAFFRCYTDHVRIAICLNLYGIALVYTSATLAAATANCLPVITFFVALLFRMEVLRLKSIAGAAKLAGILFCIGGVGIVAFYKGPQLNLFNNHHHLLSIHKPNNNHHSSSLPLTNNSWLMGCFLMLSSNTLWSVWVVLQAMVLKSYSSKLQLTNLQCLLSSFQSFGIAIAMERQPHKWKLGWNLQLLAVIYCGMMTAVTFCLQVWVIEKKGPVYLAMSTPLALIITAFFSAIFLGESITLGSTLGGMLLVGGLYFVLWGKSKEQTISDALKEGTKEGNMEEGKYITKSDNENMASL* 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 676935 681288 - Chy11G186450.1 Chy11g00065 235826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00065 328 SUPERFAMILY Multidrug resistance efflux transporter EmrE 198 294 - -
Chy11g00065 328 Pfam EamA-like transporter family 152 289 IPR000620 GO:0016020|GO:0016021
Chy11g00065 328 PANTHER WAT1-RELATED PROTEIN 1 299 IPR030184 GO:0016021|GO:0022857
Chy11g00065 328 PANTHER WAT1-RELATED PROTEIN 1 299 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g00065 Chy-Chr11:676935 Chy08g00232 Chy-Chr8:5223604 4.02E-60 dispersed
Chy11g00065 Chy-Chr11:676935 Chy11g00066 Chy-Chr11:684881 4.85E-154 tandem
Chy11g00065 Chy-Chr11:676935 Chy02g01022 Chy-Chr2:6920765 5.84E-85 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00065 - - csv:101202788 593.964