Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00066 ATGGCTGTGATTTTAATTCAAGCCATTTACGCTGGTATGTTTCTCGTCTCTAAGGCAGCTTTCGACGTTGGAATGAACAGCTATGTCTTCGTTTTCTATCGTCAAGCTTTCGCTACTGTCTTCCTTTCTCCAATAGCCTTCTTTTTTCAATGGAAAGATGCCCCACCCTTGACATTCTTCATCTTCTGCAAGATTTTTATGCTCTCTTTATTTGGGATAGCCCTATGTTTGAATCTTTATGGGATTGCTCTAGTGTACACATCAGCAACATTGGCTGCAGCAACTACAAATTCTCTTCCTGTCACCACCTTCTTTGTTGCCCTCTTACTTAGGATGGAGGTATTGAGGTTGAAGTCAATAGCAGGAATTGGAAAGCTAGCAGGAATATTATTTTGCATTTGTGGTGTTGGAGTTTTGGCATTTTACAAAGGGCCCCAATTGAATTTTTTCAACCATCATCATCTCTTTTCCGTCCATAACCCTAATCACCATTCTTCTTCTGTTGCATTACCCAATACTTGGTTGAAGGGTTGCTTTTTGATGCTATCTGCCAATACCTTATGGGGTATTTGGATTGTTCTTCAGGCCTTTGTATTGAAAAGCTATCCTTCAAAGCTTATGTTGACAAATCTTCAATGTTTATTAAGTTCATTTCAATCCTTTGCTATTGCTATTGCAATTGAAAGAGACCCTCAGCAATGGAAACTTGGCTGGAATCTTAGGCTTCTCTCAGTGGCATATTGTGGTATCGTGGTGACCGCGGTTACGTACTGTCTTCAAGCTTGGGTTATTGAGAAGAAAGGACCAGTTTATCTAGCCATGTCTACACCTATTGCTCTTGTCATTACAATCTTCTTCTCTGCTGTTTTTCTTGGAGAGAGTATCAGTCTTGGAAGTATCTTAGGAGGATTGTTATTGGTGGGAGGGTTGTATTTTGTGCTATGGGGAAAGAGCAAAGAGCAAAAAATAAGTGAAGCATTGAAAGAAGGTACCAAAGAATGCAACGACATGGAAGAAGGGAAAGATACCACTAAACTACCCAATGGAAATCCAACATCTTCTTCTGTGGAAAATGTTTGA 1080 39.91 MAVILIQAIYAGMFLVSKAAFDVGMNSYVFVFYRQAFATVFLSPIAFFFQWKDAPPLTFFIFCKIFMLSLFGIALCLNLYGIALVYTSATLAAATTNSLPVTTFFVALLLRMEVLRLKSIAGIGKLAGILFCICGVGVLAFYKGPQLNFFNHHHLFSVHNPNHHSSSVALPNTWLKGCFLMLSANTLWGIWIVLQAFVLKSYPSKLMLTNLQCLLSSFQSFAIAIAIERDPQQWKLGWNLRLLSVAYCGIVVTAVTYCLQAWVIEKKGPVYLAMSTPIALVITIFFSAVFLGESISLGSILGGLLLVGGLYFVLWGKSKEQKISEALKEGTKECNDMEEGKDTTKLPNGNPTSSSVENV* 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 684881 690979 - Chy11G186460.1 Chy11g00066 235827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00066 359 Pfam EamA-like transporter family 176 314 IPR000620 GO:0016020|GO:0016021
Chy11g00066 359 Pfam EamA-like transporter family 3 124 IPR000620 GO:0016020|GO:0016021
Chy11g00066 359 MobiDBLite consensus disorder prediction 333 359 - -
Chy11g00066 359 PANTHER WAT1-RELATED PROTEIN 3 324 IPR030184 GO:0016021|GO:0022857
Chy11g00066 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 319 - -
Chy11g00066 359 MobiDBLite consensus disorder prediction 345 359 - -
Chy11g00066 359 PANTHER WAT1-RELATED PROTEIN 3 324 - -
Chy11g00066 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 33 143 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01029 Chy-Chr2:7013454 Chy11g00066 Chy-Chr11:684881 4.29E-29 dispersed
Chy02g01030 Chy-Chr2:7024401 Chy11g00066 Chy-Chr11:684881 4.19E-90 dispersed
Chy03g00510 Chy-Chr3:7006909 Chy11g00066 Chy-Chr11:684881 5.40E-91 dispersed
Chy11g00066 Chy-Chr11:684881 Chy04g01678 Chy-Chr4:23148707 2.71E-77 dispersed
Chy11g00065 Chy-Chr11:676935 Chy11g00066 Chy-Chr11:684881 4.85E-154 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00066 - - csv:101203024 647.891