Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00067 ATGGCGAAATCATCAGGAAATGAACTTACACACAAGGCTTTTGGTTGGGCTGCTCGAGATTCATCTGGGTTACTATCCCCTTTTCATTTCTCTCGAAGGGAAAATGGTGATGATGATGTCTCTATCAAAGTTCTTTACTGTGGGGTTTGCCACTCTGATCTGCATATGCTCAAGAATGACTGGGGTTCCACAGATTATCCAATAGTACCTGGGCATGAGATTGTTGGTGTTGTGACTTCTGTTGGAAAAAATGTGAAGAAATTCAAAGCAGGAGACGAAGTCGGTGTCGGTGTCATAGTTGGATCTTGTAGAAGTTGTGAAAATTGTAAACAAGACTTGGAGAGTTACTGTCCCAAGATGGAATATACTTACAATTCTCCTGGAGTTGATGGAACGAAGAATTACGGTGGCTATTCCGATAAGATCGTTGTCGATCAACATTTTGTTGTTAGATTTCCTAAAAACTTAGCTCTTGATGCTGGGGCTCCACTCCTATGTGCTGGGATTACAGTCTATAGCCCAATGAAATATTTTGGAATGACTGAACCTGGTAAGCATTTGGGTGTGGCTGGACTTGGTGGGCTTGGTCATGTTGCTGTCAAGTTTGGTAAGGCTTTTGGATTGAAAGTTACTGTCATTAGTACCTCTTCTAGGAAGAAGGAAGAAGCAATTGACAGGCTCGGTGCTGACGCTTTCGTTGTTTCGAGTGATCCCAAACAATTGAAGGCTGCCATGGGAACTATGGATTACGTTTTGGACACAATATCTGCTGTTCATCCTCTTGATCCGTTGATTAGTCTGCTAAACCTCAATGGAAAATTGGTTGCTGTCGGCTTACCTAACAAACCAGTTGAACTATCAATCGGGATTCTCGTTTCTGGTAGGAGGGTGGTAGCTGGAAGCAACTTTGGAGGACTGAAAGAGACACAAGAAATGTTAGATTTCTGTGGAAAACACAATATTACAGCAGAAATTGAGCTCATTAAGATGGATGACATTAACTCAGCCATGGAAAGGCTTGCGAAAGCTGATGTTAAATATCGGTTCGTGATCGACGTCGAAAACTCTTTCAAATAG 1077 42.15 MAKSSGNELTHKAFGWAARDSSGLLSPFHFSRRENGDDDVSIKVLYCGVCHSDLHMLKNDWGSTDYPIVPGHEIVGVVTSVGKNVKKFKAGDEVGVGVIVGSCRSCENCKQDLESYCPKMEYTYNSPGVDGTKNYGGYSDKIVVDQHFVVRFPKNLALDAGAPLLCAGITVYSPMKYFGMTEPGKHLGVAGLGGLGHVAVKFGKAFGLKVTVISTSSRKKEEAIDRLGADAFVVSSDPKQLKAAMGTMDYVLDTISAVHPLDPLISLLNLNGKLVAVGLPNKPVELSIGILVSGRRVVAGSNFGGLKETQEMLDFCGKHNITAEIELIKMDDINSAMERLAKADVKYRFVIDVENSFK* 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 729780 731916 + Chy11G186470.1 Chy11g00067 235828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00067 358 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Chy11g00067 358 Gene3D - 16 353 - -
Chy11g00067 358 PANTHER ALDEHYDE REDUCTASE 11 357 - -
Chy11g00067 358 SUPERFAMILY GroES-like 20 185 IPR011032 -
Chy11g00067 358 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
Chy11g00067 358 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 11 357 - -
Chy11g00067 358 CDD CAD1 14 352 - -
Chy11g00067 358 Gene3D - 167 323 - -
Chy11g00067 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 321 IPR036291 -
Chy11g00067 358 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Chy11g00067 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00100 Chy-Chr1:657397 Chy11g00067 Chy-Chr11:729780 1.91E-122 dispersed
Chy02g00772 Chy-Chr2:4786533 Chy11g00067 Chy-Chr11:729780 3.29E-157 dispersed
Chy04g00399 Chy-Chr4:3533198 Chy11g00067 Chy-Chr11:729780 7.42E-142 dispersed
Chy06g01051 Chy-Chr6:8455836 Chy11g00067 Chy-Chr11:729780 9.67E-116 dispersed
Chy09g01356 Chy-Chr9:15396659 Chy11g00067 Chy-Chr11:729780 7.07E-123 dispersed
Chy11g00067 Chy-Chr11:729780 Chy11g01875 Chy-Chr11:24960412 2.16E-17 dispersed
Chy11g00067 Chy-Chr11:729780 Chy11g00068 Chy-Chr11:747014 2.01E-162 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00067 K00083 - csv:101205228 696.041