Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00068 ATGGGAGAATCACCAGAAAACGAACATCCAATCAAGACTCTCGCATGGGGTGCTCGAGATTCATCTGGGGAAAATCGTGATGAAGATGTCAATATCAAAATCCTTTACTGTGGTGTTTGCCATTCTGATCTACACGCAGCCAAGAATGAATGGGGTATCACAAGTTATCCAGTTGTCCCAGGGCATGAGATTGTTGGTGTTGTGTCCTCTGTTGGGAATAATGTGAAGAAATTCAAAGCAGGCGACCAAGTCGGGGTTGGTGTCATAGTTGAATCTTGCAAAAGTTGTGAAAATTGTGAAGAGGACAGGGAGAATTACTGCCCCAAATTGGTATATACTTACAATGCACATTTGCATGATGGATCAAAGACTTATGGTGGATATTCTGATAAGATTGTCGTCGATCAACGTTACGTGCTTCGAATTCCCGAAAGTTTACCCCTCGATGGTACAGCTCCACTTCTATGTGCTGGAATCACAGTTTATAGCCCCATGAAATACTATGGAATGAATGAAAAAGGTAAGCATTTGGGTGTGGTTGGCCTTGGTGGGCTTGGTCATGTTGCTGTTAAGTTTGGTAAGGCATTTGGGTTGAAAGTTACTGTCATAAGTACCTCTCCAAGAAAGAAGGCGGAAGCTATTAGCAAGCTTGGTGCCGATTCTTTCCTCGTTTCAACTGATCCTGAACAAATGAAGGCTGCAGTAGGGACAATGGATTACATTATGGACACGGTATCTGCTGTTCATGCTCTTGCTCCATTGCTTAGTCTTCTAAAGCTGAATGGAAAGTTGATTACTGTGGGTTTACCTAACAAGCCCCTAGAGCTGCCAATTTCTTCTCTAGTTGTCGGTAGGAGGATGGTTGGTGGAAGCAACTTTGGAGGGCTGAAAGAGACACAGGAGATGTTGGATTTTTGTGCTGAGCACAACATTGCTGCAGACGTTGAGCTCATTAAGATGGATGACATAAACAATGCCATGGAAAGACTTGCCAAATCCGATGTTCAATACCGCATTCCTTTGGGTACAAATGTCTTTAAGGTTGCCCATTTAATCACTGCTGCTGTTAGGGCCAATGGCATCAAAGGTCCTCTTCAGATTTCTGCTTTTGGTGACGTTTTCCAGCTCTCCAGGGCCAACCAGGAGGCTCTCTCTTCTACTGGAATTACCCTCAATCACGTTCCTCACGGTGGTAAAAACAGTGCTGATAGGTCTCTTCTTATAGATCTTATGTGCTGGGTTTCTCAAAACCCTCCACCAGCACATCTTTTTCTAATTTCTGGTGATAGGGACTTTGCCAGGATTCTGCACCGTTTGAGAATGAATAATTACAACGTGTTGCTAGCAAGCACTGAATGTGCTCCTGATGTTTTATGCAGTGCTGCAAGCATCATGTGGCATTGGCATGCTTTGATTAGAGAGGAAAATCTTGTTGGAAGGCATTTTAGTCGACCACCTGATGCTTTTTACGATCATTTTAAGGTTCCTCTTGAAGACCCATTTTCATTTAATGGGAAAGAGAATTTACGAGTCGAGGAGGTTTCTGAGCTCAGTTCAGATCCTATGCCCCGTCCCGTTCCAAAGGCAGTCATTAGGCAAATACACAACATCTTGAGGTTGTATCCCAAAGGAATCTCCATTACAGACCTTCGTTCAGAGTTGGGGAGTTGTATATCTATAGAAAAGGACTTGTATGGTTACAAAAAGTTTACTCGATTTCTTCAGTCAATGCCACAGATTTTAAAGCTTCAAGCAAATGGTGGTGGCCAGTTTATTATCCATAGTGTCAGTCCAAAGCAGCCCAAAGAAGAATTAGAGTCCAGTATAGGTACATTTTGTAATGGCACTGAAGAGCAGGACCCTAATCTGACAGCAAAGTTAAGTAACAATGATTCCTCAACTGAACCAATGTGTGTACCAGTCCTCTCTGATACGCACACCCAAAGCAGACCATTGAAGGAGAAACCAACTTCCGAATTTGGGAAGTTCATTGGTGAAGCTATGGAAGGGGAACCATCAAGATCCCCTGTTTCTGAGCTTCGTGCTATAGAAGATTCAAAGCAGACAAATAAAGTTGAAGCTGACAGTATTGAAGGGGAACCATCAAGATCCCCTGTTTCTGAGCTTCGTGCTACAGAAGATTCAAAGCAGACAAATAAAGTTGAAGCTGACAGTATTGAAGGGGAACCATCAAGATCCCCTGTTTCTGAGCTTCGTGCTATAGAAGATTCAAAGCGGACAAATAAAGTTGAAGCTGACAGTATTGAAGCTGACAGTAATACGACTCCTTCAATTGGAGAGCATTCTAAGGCCAAGATGGAATTTTTGAGAAGAATATGGAGAAGGCTTTCAGGCAATAATGATACTATGTCTGGAAATGGAAGTCATTGTATTTCTGAAAAATGCTCTACAACAGACGATACTTCAAAGCAGAAAAGTTGTGGTGGCCTTGTGGCAAATTATTCTAGTGACAAGCTTGGGGAGGCAAACAATGAAGAAAGAACTGCTGAGCCAATGAGTGAAGATGCTAATTCAGTTCATCAAGTCTTAAATTCACCACCTGATCGTGAGTCTCTTAAGCCTCAGAAAGAAGTCATAGTTGCCAGTGCACATGATGATAAATCTAGTTCTAATCAAGGACTACTTGGTAGCATTAGAAATTGGTTCAAGCTTTGGGGAAAGAGTACTGAGAACAGAGAAGTCAGCGAGCATAATTGTGAACAAAACCAGTTAAAGAATCAATCTGGGAAACATCATCTTTTTTCCAGCAGTTCTACTGAGAACAGTGAAGTCAGCGAGCATTCTTGTGAACAAAACCAGTTAAAGAATCAATCTGGGAAACATCATCTTTCTTCCAGCAGTTCTACTGAGAACAGTGAAGTCATCGAGCATTCTTGTGAACAAAACCAGTTAAAGAATCAATCTGGGAAACACAATCTTTTCTCCAGTAGTTCTTTCTGGCAAGACATGCAATCTTTTATGGAAACACCTACAGGAGTGGAGATTATTTCACGGTCAAAAACCAGGTCTGAGATAGCCCAAAATCTGCTAGAGAGAGGACCTCCGATTCTGAATACTTTAAGCACTAGCGAACTCTTCGACTTGTTGGAATTATTAATATCAGACAAGAAATGGGTGGAGGAATTCCCATCTAAAACATTTCCTTTTAAGCTCACTCTCTCTATTTCAAGGAAAAACTCTTGCATGAAACGATTGGATCGAGCACATGGGTTGGCATCAATCTTTGCAAACAAAGAGTCACGGCCCAGTTTCCAGGGACCTCGAAAACATGCTTCAGATTCAGATAAGAAAAATGAAAATATTCCTCCTGAATCTGGAACTAATAAAACTATGACCGAAAACATGTTTCGTGAGAGAACGAAATACGAGATATTAGGTGACTGTCAAAATCTCGTGGATGAGATCTTGAGGGATCACCCAGAAGGATATAATATAGGCATCTTCAGAAGACAGTTTCTTGAGAAGTATGGGTATCATCTTGATTTGAAGAAGCTTGGTTATCCTAAGTTGGCATCGTTGCTGCAGATAATGCCTGGAGTGACAATAGTATCCACCTTTATAGTTCCTACCAGTAATGCCCCAAACGTTTCAATGCTGGAAACAACTCTTCCTAGTAATTCTGAGAAAAAAACTTCTGATGCCGTAGCAAACTCGAACTCTGATAATGAATCATCTGACCTGCCTAAGAAGGATGATGATTCTGAGTCCGTATGGGAAGAATTGGGTCCAGCCTGCACAGATGGCAGCAACAAAGAGGAATTGACATTGAGTAGTGAAACAACAGAAGCGACAGAGAAAACAAAAGTTTATTATGAACCTTTTCTTTCAGAGGATGAAACTGATGGAGAGTCTTGTCCTGCTACGGAAGTGCCAGCCAAACAACCAAGGGAGGAAGAAAGTTCTTTAATACATATCCTTGATTCATGGTATAGCAGCAAAGAAAACAATAGGAACGACAAGACAGAAAATAGCGATGAGACCTTTGTTTTTTCTGAAGATAGCTTGAAGCTTGCTAGTTTAGCTTCCAAAAATGAAGCAAAAACAGGAAGCTTTGGTACAAAGAAAAGATATCGAAAGAGCTATTGTTTTGTTTCAGACACCTCCGAAAATAGCAAGGATAAGCTGATCGATGGGATTTTGGGTACTTTGAAAAAATCTAGCGAGTCACAAGATAAACTGAATCAAGCATGA 4212 41.41 MGESPENEHPIKTLAWGARDSSGENRDEDVNIKILYCGVCHSDLHAAKNEWGITSYPVVPGHEIVGVVSSVGNNVKKFKAGDQVGVGVIVESCKSCENCEEDRENYCPKLVYTYNAHLHDGSKTYGGYSDKIVVDQRYVLRIPESLPLDGTAPLLCAGITVYSPMKYYGMNEKGKHLGVVGLGGLGHVAVKFGKAFGLKVTVISTSPRKKAEAISKLGADSFLVSTDPEQMKAAVGTMDYIMDTVSAVHALAPLLSLLKLNGKLITVGLPNKPLELPISSLVVGRRMVGGSNFGGLKETQEMLDFCAEHNIAADVELIKMDDINNAMERLAKSDVQYRIPLGTNVFKVAHLITAAVRANGIKGPLQISAFGDVFQLSRANQEALSSTGITLNHVPHGGKNSADRSLLIDLMCWVSQNPPPAHLFLISGDRDFARILHRLRMNNYNVLLASTECAPDVLCSAASIMWHWHALIREENLVGRHFSRPPDAFYDHFKVPLEDPFSFNGKENLRVEEVSELSSDPMPRPVPKAVIRQIHNILRLYPKGISITDLRSELGSCISIEKDLYGYKKFTRFLQSMPQILKLQANGGGQFIIHSVSPKQPKEELESSIGTFCNGTEEQDPNLTAKLSNNDSSTEPMCVPVLSDTHTQSRPLKEKPTSEFGKFIGEAMEGEPSRSPVSELRAIEDSKQTNKVEADSIEGEPSRSPVSELRATEDSKQTNKVEADSIEGEPSRSPVSELRAIEDSKRTNKVEADSIEADSNTTPSIGEHSKAKMEFLRRIWRRLSGNNDTMSGNGSHCISEKCSTTDDTSKQKSCGGLVANYSSDKLGEANNEERTAEPMSEDANSVHQVLNSPPDRESLKPQKEVIVASAHDDKSSSNQGLLGSIRNWFKLWGKSTENREVSEHNCEQNQLKNQSGKHHLFSSSSTENSEVSEHSCEQNQLKNQSGKHHLSSSSSTENSEVIEHSCEQNQLKNQSGKHNLFSSSSFWQDMQSFMETPTGVEIISRSKTRSEIAQNLLERGPPILNTLSTSELFDLLELLISDKKWVEEFPSKTFPFKLTLSISRKNSCMKRLDRAHGLASIFANKESRPSFQGPRKHASDSDKKNENIPPESGTNKTMTENMFRERTKYEILGDCQNLVDEILRDHPEGYNIGIFRRQFLEKYGYHLDLKKLGYPKLASLLQIMPGVTIVSTFIVPTSNAPNVSMLETTLPSNSEKKTSDAVANSNSDNESSDLPKKDDDSESVWEELGPACTDGSNKEELTLSSETTEATEKTKVYYEPFLSEDETDGESCPATEVPAKQPREEESSLIHILDSWYSSKENNRNDKTENSDETFVFSEDSLKLASLASKNEAKTGSFGTKKRYRKSYCFVSDTSENSKDKLIDGILGTLKKSSESQDKLNQA* 1404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 747014 756076 + Chy11G186480.1 Chy11g00068 235829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00068 1403 MobiDBLite consensus disorder prediction 678 698 - -
Chy11g00068 1403 Coils Coil 894 914 - -
Chy11g00068 1403 Gene3D - 157 313 - -
Chy11g00068 1403 MobiDBLite consensus disorder prediction 825 859 - -
Chy11g00068 1403 MobiDBLite consensus disorder prediction 707 727 - -
Chy11g00068 1403 MobiDBLite consensus disorder prediction 667 766 - -
Chy11g00068 1403 MobiDBLite consensus disorder prediction 907 977 - -
Chy11g00068 1403 CDD CAD1 15 341 - -
Chy11g00068 1403 Pfam NYN domain 344 462 IPR021139 GO:0004540
Chy11g00068 1403 MobiDBLite consensus disorder prediction 1087 1120 - -
Chy11g00068 1403 MobiDBLite consensus disorder prediction 1257 1271 - -
Chy11g00068 1403 MobiDBLite consensus disorder prediction 1209 1307 - -
Chy11g00068 1403 ProSiteProfiles OST-type HTH domain profile. 1131 1209 IPR025605 -
Chy11g00068 1403 Gene3D - 24 339 - -
Chy11g00068 1403 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 146 311 IPR036291 -
Chy11g00068 1403 CDD LOTUS 527 589 - -
Chy11g00068 1403 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 61 75 IPR002328 GO:0008270|GO:0016491
Chy11g00068 1403 MobiDBLite consensus disorder prediction 900 977 - -
Chy11g00068 1403 CDD PIN_limkain_b1_N_like 322 450 - -
Chy11g00068 1403 Gene3D - 343 468 - -
Chy11g00068 1403 MobiDBLite consensus disorder prediction 1 25 - -
Chy11g00068 1403 MobiDBLite consensus disorder prediction 1090 1109 - -
Chy11g00068 1403 Pfam OST-HTH/LOTUS domain 1140 1190 IPR025605 -
Chy11g00068 1403 Pfam OST-HTH/LOTUS domain 529 592 IPR025605 -
Chy11g00068 1403 CDD LOTUS 1132 1190 - -
Chy11g00068 1403 MobiDBLite consensus disorder prediction 1209 1230 - -
Chy11g00068 1403 Gene3D - 527 597 IPR041966 -
Chy11g00068 1403 Gene3D - 1133 1194 IPR041966 -
Chy11g00068 1403 PANTHER LIMKAIN B LKAP 338 1340 IPR024768 GO:0005777|GO:0010468|GO:1903231
Chy11g00068 1403 SUPERFAMILY GroES-like 26 175 IPR011032 -
Chy11g00068 1403 MobiDBLite consensus disorder prediction 736 753 - -
Chy11g00068 1403 ProSiteProfiles OST-type HTH domain profile. 526 597 IPR025605 -
Chy11g00068 1403 Pfam Alcohol dehydrogenase GroES-like domain 28 141 IPR013154 -
Chy11g00068 1403 PANTHER EMB|CAB71880.1 338 1340 - -
Chy11g00068 1403 SMART PKS_ER_names_mod 9 346 IPR020843 GO:0016491
Chy11g00068 1403 Pfam Zinc-binding dehydrogenase 184 307 IPR013149 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g00439 Chy-Chr9:3899773 Chy11g00068 Chy-Chr11:747014 5.04E-31 dispersed
Chy11g00068 Chy-Chr11:747014 Chy09g01339 Chy-Chr9:15252861 9.38E-18 dispersed
Chy11g00067 Chy-Chr11:729780 Chy11g00068 Chy-Chr11:747014 2.01E-162 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00068 K00083 - csv:101207201 1820.05