Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00082 ATGGAGTCTTGTTTACTTAAACCAAAAGACACCACTTCTTGGTGGGTTCTGGCTCTACCTTATTTCCTTGGCCTTGAAAACTATGCCCTCTTTCACTCCTTCCTCCTCATTCTCCTCGCTTTCTTCTCTCTCGCTCTTCTCACCTGGGTTTTCTCACCAGGTGGTACTGCTTGGAGAAATGGAAGAAACCGTCGGGGCCTACTCCCTATACCTGGCCCTCGTGGCCTTCCATTTCTTGGCAGTTTGTTCACTCTCACTCATTCCTTACCTCATCGCACTCTTGCTGCCTTAGCATCGACCCGTTGCGAGTCTAATCTTATGGCTTTCTCTCTCGGCTCCACTCCTGTTGTCGTCGCATCCGACCCTAACACCGCTAAGGAAATCTTAACCTCCCCACACTTTGCGGACCGCCCGCTTAAGCAGTCCGCGAAGAGTCTAATGTTTGGTCGAGCCATAGGGTTCGCACCGAACGGAACGTACTGGCGTATGTTAAGAAGAATTGCGTCTTCCCACCTTTTCTCTCCAAAGCGTATTGCCGCTCACGAGAGCGCTCGTCAGCGGCAATGCGCGGAAATGATTCGCAACATTCACCACGAACAAATTGTCCATGGAAGTGTGGGGTTGAGGGACCATGTTCAAGTGGCTTCATTGAAGAACGTGATGTGGAGTGTGTTTGGGAAAAGGTTGGAGGAAGGGGATATGGAATTGGAAATGGTTCGCGATTTGGTTCGTGAAGGGTTTGAGCTATTGGGTGCGTTTAATTGGTCGGATTATATGCCATGGTTGAGTTGGTTTTATGATCCGTTTCGTATTAACCAACGGTGCGCTAAACTTGTTCCTAAGGTTAATGAGTTTGTTGGTGGCGTAATTGATGAACACCGCCGTTGTAAAACCTTGTCCGATGATTCTGATTTTGTTGACGTTTTGCTTTTTCTTGATGGTGATGAAAAACTCAAGGATGATGACATGATCGCTGTTTTATGGGAAATGATTTTTAGGGGTACGGATACGACAGCGCTACTAACGGAATGGGTTATGGCGGAGTTAGTTTTACATGGCGAAATACAAGAAGAAGTTAGGAAGGAATTGGAAAGAGTAGTGGGGGGTGGTGAGGAAAGCAACATCACAGACGCTGAGGTGGCGAAACTACCATACTTACAGGCGGTGGTGAAGGAAACTCTACGGCTACACCCACCGGGTCCACTGCTATCGTGGGCCCGTCTCTCTTCGTCGGATGTCCAGCTCAGCAACGGCATGCTTATCCCTCAGAACACAACCGCCATGGTCAATATGTGGGCCATCACCCACGATCCCCACGTATGGGAACAACCACACGTGTTCAACCCCGCCAGGTTCCTCAATGCCGACGTGGACATCCGTGGAAGCGACCTCCGCCTTGCTCCCTTCGGGGCAGGCCGGAGGGTCTGCCCGGGTAAAAACCTCGGCCTTGTCACCGTCACTTTATGGGTCGCTAAGTTGGTTCATCACTTTAAATGGGCCCCCGACCCGGACCACCCCGTGGATCTAACCGAACTTCTTAAGCTCTCTTCTGAGATGAAGAATCCTCTGCGTGCAGTCGTACGGGAAATACGTGGTCTTTAG 1602 50.25 MESCLLKPKDTTSWWVLALPYFLGLENYALFHSFLLILLAFFSLALLTWVFSPGGTAWRNGRNRRGLLPIPGPRGLPFLGSLFTLTHSLPHRTLAALASTRCESNLMAFSLGSTPVVVASDPNTAKEILTSPHFADRPLKQSAKSLMFGRAIGFAPNGTYWRMLRRIASSHLFSPKRIAAHESARQRQCAEMIRNIHHEQIVHGSVGLRDHVQVASLKNVMWSVFGKRLEEGDMELEMVRDLVREGFELLGAFNWSDYMPWLSWFYDPFRINQRCAKLVPKVNEFVGGVIDEHRRCKTLSDDSDFVDVLLFLDGDEKLKDDDMIAVLWEMIFRGTDTTALLTEWVMAELVLHGEIQEEVRKELERVVGGGEESNITDAEVAKLPYLQAVVKETLRLHPPGPLLSWARLSSSDVQLSNGMLIPQNTTAMVNMWAITHDPHVWEQPHVFNPARFLNADVDIRGSDLRLAPFGAGRRVCPGKNLGLVTVTLWVAKLVHHFKWAPDPDHPVDLTELLKLSSEMKNPLRAVVREIRGL* 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 930368 932086 - Chy11G186620.1 Chy11g00082 235843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00082 533 Pfam Cytochrome P450 71 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00082 533 Gene3D Cytochrome P450 60 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00082 533 PANTHER CYTOCHROME P450 78A7-RELATED 11 528 - -
Chy11g00082 533 SUPERFAMILY Cytochrome P450 70 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00082 533 PRINTS E-class P450 group I signature 100 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00082 533 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00082 533 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00082 533 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00082 533 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00082 533 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00082 533 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00082 533 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00082 533 PRINTS P450 superfamily signature 476 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00082 533 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00082 533 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00082 533 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00082 533 PANTHER CYTOCHROME P450 FAMILY 78 PROTEIN 11 528 - -
Chy11g00082 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g00082 Chy-Chr11:930368 Chy11g01721 Chy-Chr11:23606621 1.29E-164 dispersed
Chy11g00082 Chy-Chr11:930368 Chy12g01486 Chy-Chr12:18753705 5.11E-169 transposed
Chy11g00082 Chy-Chr11:930368 Chy03g00721 Chy-Chr3:9676446 8.85E-169 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00082 K20619 - csv:101214099 1024.23