Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00154 ATGTCACAACAAGACTACCAACAAGCGGCGGCGGCGGCCGCTGCAGCAGCAGCGGCAGGTTTCTTCACGCCGTTTTCCAATGGCTTTGATAGATCTTCCACAACTCACCACCAAGACTCACATCAACATTACCAACACATAGCTCACCAGATCCGTAAAGAGAAGCTCCGCCTCCAAGGCAGTTACGACGCGCCGCCACATCCACCGTCCTTAGTCGGAATCGACGATGACGACGACAACGACGACCAATCTGCTGTCCATCACGTTTACGACTCCACTGGAATTTTATCCGAAATGTTCAATTTTCCACCACCGCCGCCACCGCCACCCCCGCAGACTGATTGGTACAGTAACAGGCAAACAATCAACGCGGCGGATTCGGCTGTCGCCATGCAGCTTTTTCTAATGAACCCGAATCCTCGGTCGCCATCTCCGCCACCACCGCCAACACCGTCGTCGACACTCCACATGCTTCTTCCAAACCCTTCTTCAGGAGGGTCTTATGGGCAATTCACATGGGGGGTGGTGCCGGAGCAAGAAACAAATAATGACCATTCTTCATCAAACCCTAATGAAGGTCGTCTTTCATTGTCGTTGTCATCTTCTTTGGAAGCTGCAAAAGCTGAGGAATTGAGAATGGGTGACAGCAACAATGGGCTACTTTATCATCACCACCATCATCCTCATGTCGGAATTGGGTCCTCCAATCCATTGGGAGTTGTCAACTTATTGAGAAATTCAAAGTACATCAAAGCTGCTCAAGAATTATTAGAGGAATTTTGTAGCGTTGGAAGAGGTCAATTTAAGAAAAACAATCGTAATAATAAATCAAATTTGCCCTCCAATTCTAATTCCCACGGTGGCGGTGGAGGCGAGGGTGCCGGAGTTTCTTCATCTTCAACAAAGGATCATCAACCATCTTTGTCAGCAACCGATAGGATTGAACATCAAAGGAGAAAGGTTGATAGAAGATACAATCATTATTGTGAGCAAATGCAAATGGTGGTGAATTCATTCGACGAGGTGATGGGATTCAGGGCAGCAGTGCCATACACGGCGTTGGCGCAAAAGGCAATGTCGAGGCATTTTCGGTGTTTAAAGGACGCAATATCATCACAGTTGAAGCATAGTTACGAGATGTTGGGAGAGAAAGATGGGGGAGTAACTGGAAGAGCTTCGGGAATAACAAAAGGAGAGACTCCTAGACTTAAGCTCTTGGAGCAAAGCCTTAGACAACAACGAGCTTTCCATCAAATGGGTATTATGGAACAAGAAGCTTGGCGTCCTCAACGCGGCTTGCCTGAACGCTCTGTCAATATCTTACGAGCTTGGCTCTTCGAGCATTTCCTTCATCCGTATCCTAGTGATGCTGATAAGCATTTGTTAGCTAGACAGACTGATAATAATATCCAACCATACGCGATAAGAAAACATGATGACACTACTGTTGTATTTGTCATCGGCATTCAGCTGCTGCTGCTGTATCAAATTGGTTCATTAATGCCAGGGTTCGTTTGTGGAAACCCATGGTAG 1533 46.97 MSQQDYQQAAAAAAAAAAAGFFTPFSNGFDRSSTTHHQDSHQHYQHIAHQIRKEKLRLQGSYDAPPHPPSLVGIDDDDDNDDQSAVHHVYDSTGILSEMFNFPPPPPPPPPQTDWYSNRQTINAADSAVAMQLFLMNPNPRSPSPPPPPTPSSTLHMLLPNPSSGGSYGQFTWGVVPEQETNNDHSSSNPNEGRLSLSLSSSLEAAKAEELRMGDSNNGLLYHHHHHPHVGIGSSNPLGVVNLLRNSKYIKAAQELLEEFCSVGRGQFKKNNRNNKSNLPSNSNSHGGGGGEGAGVSSSSTKDHQPSLSATDRIEHQRRKVDRRYNHYCEQMQMVVNSFDEVMGFRAAVPYTALAQKAMSRHFRCLKDAISSQLKHSYEMLGEKDGGVTGRASGITKGETPRLKLLEQSLRQQRAFHQMGIMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTDNNIQPYAIRKHDDTTVVFVIGIQLLLLYQIGSLMPGFVCGNPW* 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1548961 1554022 + Chy11G187340.1 Chy11g00154 235915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00154 510 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 74 466 - -
Chy11g00154 510 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 74 466 - -
Chy11g00154 510 Gene3D - 433 484 - -
Chy11g00154 510 SMART prehox3 238 372 IPR006563 -
Chy11g00154 510 MobiDBLite consensus disorder prediction 136 161 - -
Chy11g00154 510 MobiDBLite consensus disorder prediction 267 307 - -
Chy11g00154 510 Pfam Associated with HOX 244 371 IPR006563 -
Chy11g00154 510 MobiDBLite consensus disorder prediction 100 114 - -
Chy11g00154 510 Pfam Homeobox KN domain 444 469 IPR008422 GO:0003677|GO:0006355
Chy11g00154 510 MobiDBLite consensus disorder prediction 60 117 - -
Chy11g00154 510 MobiDBLite consensus disorder prediction 267 319 - -
Chy11g00154 510 MobiDBLite consensus disorder prediction 139 155 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g00154 Chy-Chr11:1548961 Chy12g00801 Chy-Chr12:12810356 1.95E-53 dispersed
Chy11g00154 Chy-Chr11:1548961 Chy02g00963 Chy-Chr2:6403463 2.66E-120 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00154 - - csv:101212977 783.482