Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00187 ATGGATACCTTGTTAAGGTTGGTCAATGATCATCTTGAATCCTCTGATCAATATTCTTATAACAATAATTCAAGCAGCAGCTCAAAGAATTCTAGTGATCAAAATCATTATAATTTCTATCTTCAAAACCCACAATCTCAAGAATGCTTCAACAATTTGTTCATGGAGGATGAAGATCATTTCTCTGCTTCCTCTTCTTCAAGTCACCACCACCACCACCACCACCACCAACTCCGACAGCTTCAATGTTCCACCACCACGACTAGTACTACATCCACTGGTGTTGTTGCTCCAGTTGATCAAGACCCAAACTTTGAACTCTCTGAAGAATGGGCTTCTACAATACTCCTCCAAACAGCCATTGCTATGGTCAACAATAACACTACTCGAATCCAACACCTCATGTGGGTGTTGAATGAGCTTGGTTCTCCATACGGCGACATCGATCAAAAGCTAGCGTTCTACTTTCTTCAAGGCATGTTCAGTCGAGTCACTGACTCAGGCGCCAAGTGCTACAGAACCTTGGCAGCAGCATTGGAGAAACAGTCGTGTTTCGAGTCGATGAGAAGAATGGTGTTGAAGTTTGAGGAGGTGAGTCCATGGATGAGATTTGGCTATGTTGCTTCAAATGGCTCCTTAATGGAAGCTTTACAAGGTGAAAAGAAGTTGCATATAATTGATATTGCTGGAAGTTACTCCTCATTTTGCACTCAATGGCCAACTTTTATTGAAGCTTTGGCAACACAATCGGACCAAACTCCGCACCTTACTCTAACTACCTTGGTTGCAGCCAAGTCGGAAGGAACCCTACGAGCTCATAAGAAATTGATGAAGGAAATAAGTAGAAGACTAGAGAAGTTCGCAAGGCTTATGGGAATTCCCTTCAAATTCAAACCCATTTTCCACTACGGCGACGTTTCACACTTCGATTTTACAAATTTACCCCTCAAAAACGACGAGGCCGTCGCTGTCAACTGCTCCGGTGCCTTGCGCTCCGTCGCCCCCCTTCACAACCGCCGCGATTTTCTCATATCCTTATTCCGATCTTTGCGGCCCAAGGTTATCACCGTCGTTGAGGAGGAAGCCGATCTCGACGCCCACGGCGGCGCCGACGACTTTGTCAAACACCTTCAGGAGTGTTTACGGTGGTTTAGGCTTTACTTCGATTCCTTGGACGGAAGTTTCCCGGTCGTCACTAACGAAAGGTTAATGCTTGAACGCGCAGCTGGACGCGCCGTCGTGGACTTGCTTGCACGCGGGCTGGCGGAATCGGTGGAGAGGCGTGAGACGGCGGCGCGTTGGGTCCGTCGTTTGCATGACGGTGGTTTTAAACCGGTGTCGTTTAGTGAGGATGTAAATGATGATGTACGCGCGCTATTGAGGAGGTACAAGGATGGGTGGACAGTGATGGACGGCGACGGAGCTGGAGCCGGGATGTTCTTGGCTTGGAAGGGGCAGCCGGTGGTTTGGGCCGCCGCGTGGGTGCCTGGACAGGTAGACGGAGAGAAGACACACGTGTGA 1521 48.45 MDTLLRLVNDHLESSDQYSYNNNSSSSSKNSSDQNHYNFYLQNPQSQECFNNLFMEDEDHFSASSSSSHHHHHHHHQLRQLQCSTTTTSTTSTGVVAPVDQDPNFELSEEWASTILLQTAIAMVNNNTTRIQHLMWVLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGAKCYRTLAAALEKQSCFESMRRMVLKFEEVSPWMRFGYVASNGSLMEALQGEKKLHIIDIAGSYSSFCTQWPTFIEALATQSDQTPHLTLTTLVAAKSEGTLRAHKKLMKEISRRLEKFARLMGIPFKFKPIFHYGDVSHFDFTNLPLKNDEAVAVNCSGALRSVAPLHNRRDFLISLFRSLRPKVITVVEEEADLDAHGGADDFVKHLQECLRWFRLYFDSLDGSFPVVTNERLMLERAAGRAVVDLLARGLAESVERRETAARWVRRLHDGGFKPVSFSEDVNDDVRALLRRYKDGWTVMDGDGAGAGMFLAWKGQPVVWAAAWVPGQVDGEKTHV* 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1862058 1865430 + Chy11G187670.1 Chy11g00187 235948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00187 506 Pfam GRAS domain family 114 494 IPR005202 -
Chy11g00187 506 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 495 IPR005202 -
Chy11g00187 506 MobiDBLite consensus disorder prediction 15 37 - -
Chy11g00187 506 ProSiteProfiles GRAS family profile. 103 495 IPR005202 -
Chy11g00187 506 PANTHER PROTEIN SHORT-ROOT 1 495 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Chy11g00187 506 MobiDBLite consensus disorder prediction 61 83 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00841 Chy-Chr2:5349178 Chy11g00187 Chy-Chr11:1862058 0 dispersed
Chy11g00187 Chy-Chr11:1862058 Chy11g01923 Chy-Chr11:25354236 2.94E-134 dispersed
Chy11g00187 Chy-Chr11:1862058 Chy01g00400 Chy-Chr1:2827306 1.27E-46 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18668 PF03514 GRAS 8.10E-88 CL0063 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00187 - - csv:101210294 932.169