Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00219 ATGGAGTGGATTCGAGGGGATCAACTCGGCCGTGGAAATTTTGCTACAATCAATTTAGCAAAGTTAACTAAAGGGTTCGATCAGTTCCCGCCATTAATGGCGGTCAAATCCTCTGTTTCTTCTCTATCCTCTGTTTCATCACTCAAGAACGAGAAGCAAATTCTTGATCGAATTGGGGTTTGCCCACAGATTATCACTTGTTATGGCGATGGATTAAGTGTTGAAAAAGATGGGGATAAGAGTTATAATTTGTTCTTGGAGTATGCTAATGGCGGAAGTCTTGCGGATGCTTTGAGAATCCATGGCGGTGGGTTGTCGGAATTTGACGTTCGAAGGTATACGAGAGCGATTCTTTGTGGACTACAGCATGTTCATGGCAATGGGTTTGTTCATTGCGATTTAAAGCTTTCGAATGTGTTAATTTTCGGGAATGGTGAAGTTAAGATCGCGGATTTTGGGCTTGCTAAATCGGCTGGAAAATTTGCGGCAGTGGAAACAGAGGAGAGATTTGAGTGGAGAGGGACTCCGATGTATATGTCGCCGGAGATTGTAAACGACGGTGAGTATGAGTCGCCGTGTGATATTTGGGCGTTGGGTTGCGCCGTCGTGGAGATGGTGGTTGGAAAGCCGGCGTGGAGGGTTGGGCCGGAAACGGATATGTTTGGCTTGATGATGAGGATTGGAGTCGGAGATGAAGTACCGGAGGTACCAGAGAATTTATCGGCGGAGGGGAAAGATTTTATCCGGCGATGTTTTGTAAAGGATCCAAGTAAGAGATGGACGGCGGAGATACTTTTGAATCACCCATTCGTCGCCGGTGCCGGTGATACTGTTACATTGAAGGAAGTAGAATTGGCGACGGAATCACCAACGGGGCCTTTCGATTTCCCGGAATTCGTTTGTTCCGGGCAAGGTTCGAATGAGTGGAGTTTTTGTTCTTCTAGTTCGTCGCCAGAGGTGTTGAGTAGGGTCCGGCAGCTGATGACGGGGAAGCCTTTGGATTGGTCTGTCATGGATAGTTGGGTGACAGTTAGGTACTAG 1041 47.26 MEWIRGDQLGRGNFATINLAKLTKGFDQFPPLMAVKSSVSSLSSVSSLKNEKQILDRIGVCPQIITCYGDGLSVEKDGDKSYNLFLEYANGGSLADALRIHGGGLSEFDVRRYTRAILCGLQHVHGNGFVHCDLKLSNVLIFGNGEVKIADFGLAKSAGKFAAVETEERFEWRGTPMYMSPEIVNDGEYESPCDIWALGCAVVEMVVGKPAWRVGPETDMFGLMMRIGVGDEVPEVPENLSAEGKDFIRRCFVKDPSKRWTAEILLNHPFVAGAGDTVTLKEVELATESPTGPFDFPEFVCSGQGSNEWSFCSSSSSPEVLSRVRQLMTGKPLDWSVMDSWVTVRY* 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2047451 2048491 - Chy11G187990.1 Chy11g00219 235980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00219 346 Gene3D Transferase(Phosphotransferase) domain 1 2 291 - -
Chy11g00219 346 ProSiteProfiles Protein kinase domain profile. 3 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g00219 346 SMART serkin_6 3 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g00219 346 CDD STKc_MAPKKK 2 271 - -
Chy11g00219 346 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 323 - -
Chy11g00219 346 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 323 - -
Chy11g00219 346 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Chy11g00219 346 Pfam Protein kinase domain 6 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g00219 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Chy11g00219 346 SUPERFAMILY Protein kinase-like (PK-like) 3 297 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01494 Chy-Chr4:21595957 Chy11g00219 Chy-Chr11:2047451 1.27E-51 dispersed
Chy11g00219 Chy-Chr11:2047451 Chy11g00625 Chy-Chr11:7372794 6.81E-64 dispersed
Chy11g00219 Chy-Chr11:2047451 Chy02g00907 Chy-Chr2:5896049 1.36E-135 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71532 PF00069 Pkinase 5.70E-52 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00219 - - csv:101214756 671.003