Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g00219 | ATGGAGTGGATTCGAGGGGATCAACTCGGCCGTGGAAATTTTGCTACAATCAATTTAGCAAAGTTAACTAAAGGGTTCGATCAGTTCCCGCCATTAATGGCGGTCAAATCCTCTGTTTCTTCTCTATCCTCTGTTTCATCACTCAAGAACGAGAAGCAAATTCTTGATCGAATTGGGGTTTGCCCACAGATTATCACTTGTTATGGCGATGGATTAAGTGTTGAAAAAGATGGGGATAAGAGTTATAATTTGTTCTTGGAGTATGCTAATGGCGGAAGTCTTGCGGATGCTTTGAGAATCCATGGCGGTGGGTTGTCGGAATTTGACGTTCGAAGGTATACGAGAGCGATTCTTTGTGGACTACAGCATGTTCATGGCAATGGGTTTGTTCATTGCGATTTAAAGCTTTCGAATGTGTTAATTTTCGGGAATGGTGAAGTTAAGATCGCGGATTTTGGGCTTGCTAAATCGGCTGGAAAATTTGCGGCAGTGGAAACAGAGGAGAGATTTGAGTGGAGAGGGACTCCGATGTATATGTCGCCGGAGATTGTAAACGACGGTGAGTATGAGTCGCCGTGTGATATTTGGGCGTTGGGTTGCGCCGTCGTGGAGATGGTGGTTGGAAAGCCGGCGTGGAGGGTTGGGCCGGAAACGGATATGTTTGGCTTGATGATGAGGATTGGAGTCGGAGATGAAGTACCGGAGGTACCAGAGAATTTATCGGCGGAGGGGAAAGATTTTATCCGGCGATGTTTTGTAAAGGATCCAAGTAAGAGATGGACGGCGGAGATACTTTTGAATCACCCATTCGTCGCCGGTGCCGGTGATACTGTTACATTGAAGGAAGTAGAATTGGCGACGGAATCACCAACGGGGCCTTTCGATTTCCCGGAATTCGTTTGTTCCGGGCAAGGTTCGAATGAGTGGAGTTTTTGTTCTTCTAGTTCGTCGCCAGAGGTGTTGAGTAGGGTCCGGCAGCTGATGACGGGGAAGCCTTTGGATTGGTCTGTCATGGATAGTTGGGTGACAGTTAGGTACTAG | 1041 | 47.26 | MEWIRGDQLGRGNFATINLAKLTKGFDQFPPLMAVKSSVSSLSSVSSLKNEKQILDRIGVCPQIITCYGDGLSVEKDGDKSYNLFLEYANGGSLADALRIHGGGLSEFDVRRYTRAILCGLQHVHGNGFVHCDLKLSNVLIFGNGEVKIADFGLAKSAGKFAAVETEERFEWRGTPMYMSPEIVNDGEYESPCDIWALGCAVVEMVVGKPAWRVGPETDMFGLMMRIGVGDEVPEVPENLSAEGKDFIRRCFVKDPSKRWTAEILLNHPFVAGAGDTVTLKEVELATESPTGPFDFPEFVCSGQGSNEWSFCSSSSSPEVLSRVRQLMTGKPLDWSVMDSWVTVRY* | 347 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2047451 | 2048491 | - | Chy11G187990.1 | Chy11g00219 | 235980 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g00219 | 346 | Gene3D | Transferase(Phosphotransferase) domain 1 | 2 | 291 | - | - | |
Chy11g00219 | 346 | ProSiteProfiles | Protein kinase domain profile. | 3 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g00219 | 346 | SMART | serkin_6 | 3 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g00219 | 346 | CDD | STKc_MAPKKK | 2 | 271 | - | - | |
Chy11g00219 | 346 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 | 1 | 323 | - | - | |
Chy11g00219 | 346 | PANTHER | CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED | 1 | 323 | - | - | |
Chy11g00219 | 346 | ProSitePatterns | Protein kinases ATP-binding region signature. | 9 | 36 | IPR017441 | GO:0005524 | |
Chy11g00219 | 346 | Pfam | Protein kinase domain | 6 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g00219 | 346 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 129 | 141 | IPR008271 | GO:0004672|GO:0006468 | |
Chy11g00219 | 346 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 297 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy04g01494 | Chy-Chr4:21595957 | Chy11g00219 | Chy-Chr11:2047451 | 1.27E-51 | dispersed | |
Chy11g00219 | Chy-Chr11:2047451 | Chy11g00625 | Chy-Chr11:7372794 | 6.81E-64 | dispersed | |
Chy11g00219 | Chy-Chr11:2047451 | Chy02g00907 | Chy-Chr2:5896049 | 1.36E-135 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71532 | PF00069 | Pkinase | 5.70E-52 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g00219 | - | - | csv:101214756 | 671.003 |