Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g00230 | ATGAATTCAATTTCTGCTCACACCCATAACCCTTTTCGATCTGCTTCTCATTCAATTTTCCCCTCTTTCACTTTCAACTTCCCTTCCCAACTTCCCTCTCATCCGTTTCTCAATCCTATTTCTCCCAATTGCATCCTCAATTCTGCAAGATTACGGACCCCTAATCCCCATGTTCGTCGCAATTTCAGGTCGTCTCAAGTTCTCAAGGCTTCCACTTCTTCTGGGTATGTCCCAGAGATTGGGGAAATTCTCGGCGATGTTCGTATTTTCACTGCTGGTGGTGAGCCAGTTCTGTTCAAGGATCTTTGGGATCAGACGGAGGGAATGGCTGTTGTTGCACTTTTGAGACATTTTGGATGCTTTTGCTGTTGGGAACTTGCTTCCACTCTAAAGGAATCCAAAGAAAGATTTGATTCATCTGGTGTTAAATTAATAGCTGTAGGCATCGGTACTCCAAATAAAGCACGTATCCTAGCCGAGCGGTTGCCTTTTCCAATGGATTGCCTTTATGCTGATCCTGATAGAAAGGCATATGATTTACTAGGTCTATACTATGGCTTTGGTCGTACATTCCTTAATCCAGCTAGTGTCAAGGTGTTTTCAAAGGCGAGATTGGACGTTATGCGAGAAGCCATGAAAAACTATACTTTTGAAGCTACCCCGGACGATAAAAGCAGCGTGTTGCAGCAGGGGATAAGGATGAGAAAATGGGGGAAATGGGTTGCCGAAATTCGAGAACCCAATAAACGCTCTCGAATTTGGCTGGGTTCTTATTCCTCCCCCGTCGCTGCCGCCCGTGCTTACGACTCCGCCGTCTTCCACCTCCGTGGCCCCACCGCTCGCCTTAATTTCCCTGACTTTTTAACCACCACCGTTGACCGTGGCTCCTCCTTCCCTCTCTCCGCCGCTGCTGTCCGCAAGATCGCTGCCGAAGTCGGCGCTCAGGTCGACGCCCTTGAGTCGTCTCGCCGTCATTCTTCCGACCAAAGTTGTTCTGTCAACCCCACCAAGCTTCGTTGCTGTTCTTATTCTTGTTCAAGTGGGTTTTCCGATCGGGTCGACTTGAATAAATTTCCCGACCCGGAGGATTCCGATGGCGACTGCGTTAGTACTCATTGGACAAGCTGA | 1128 | 48.32 | MNSISAHTHNPFRSASHSIFPSFTFNFPSQLPSHPFLNPISPNCILNSARLRTPNPHVRRNFRSSQVLKASTSSGYVPEIGEILGDVRIFTAGGEPVLFKDLWDQTEGMAVVALLRHFGCFCCWELASTLKESKERFDSSGVKLIAVGIGTPNKARILAERLPFPMDCLYADPDRKAYDLLGLYYGFGRTFLNPASVKVFSKARLDVMREAMKNYTFEATPDDKSSVLQQGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDSAVFHLRGPTARLNFPDFLTTTVDRGSSFPLSAAAVRKIAAEVGAQVDALESSRRHSSDQSCSVNPTKLRCCSYSCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS* | 376 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2160560 | 2165994 | - | Chy11G188100.1 | Chy11g00230 | 235991 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g00230 | 375 | CDD | AP2 | 229 | 286 | IPR001471 | GO:0003700|GO:0006355 | |
Chy11g00230 | 375 | PRINTS | Ethylene responsive element binding protein signature | 267 | 287 | IPR001471 | GO:0003700|GO:0006355 | |
Chy11g00230 | 375 | PRINTS | Ethylene responsive element binding protein signature | 229 | 240 | IPR001471 | GO:0003700|GO:0006355 | |
Chy11g00230 | 375 | ProSiteProfiles | AP2/ERF domain profile. | 228 | 285 | IPR001471 | GO:0003700|GO:0006355 | |
Chy11g00230 | 375 | Pfam | AP2 domain | 230 | 277 | IPR001471 | GO:0003700|GO:0006355 | |
Chy11g00230 | 375 | SMART | rav1_2 | 228 | 291 | IPR001471 | GO:0003700|GO:0006355 | |
Chy11g00230 | 375 | Pfam | AhpC/TSA antioxidant enzyme | 130 | 231 | IPR032801 | - | |
Chy11g00230 | 375 | SUPERFAMILY | Thioredoxin-like | 78 | 186 | IPR036249 | - | |
Chy11g00230 | 375 | Gene3D | Glutaredoxin | 76 | 215 | - | - | |
Chy11g00230 | 375 | CDD | PRX_like2 | 84 | 231 | - | - | |
Chy11g00230 | 375 | SUPERFAMILY | DNA-binding domain | 230 | 286 | IPR016177 | GO:0003677 | |
Chy11g00230 | 375 | Gene3D | AP2/ERF domain | 230 | 286 | IPR036955 | GO:0003700|GO:0006355 | |
Chy11g00230 | 375 | PANTHER | - | 63 | 231 | IPR032801 | - | |
Chy11g00230 | 375 | PANTHER | OS03G0729300 PROTEIN | 63 | 231 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy02g00900 | Chy11g00230 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy03g01559 | Chy-Chr3:17756196 | Chy11g00230 | Chy-Chr11:2160560 | 3.76E-45 | dispersed | |
Chy07g00155 | Chy-Chr7:1318631 | Chy11g00230 | Chy-Chr11:2160560 | 1.86E-47 | dispersed | |
Chy07g00292 | Chy-Chr7:2369808 | Chy11g00230 | Chy-Chr11:2160560 | 6.22E-24 | dispersed | |
Chy11g00230 | Chy-Chr11:2160560 | Chy04g00679 | Chy-Chr4:8084541 | 7.69E-25 | dispersed | |
Chy08g00809 | Chy-Chr8:15663948 | Chy11g00230 | Chy-Chr11:2160560 | 4.80E-18 | transposed | |
Chy11g00230 | Chy-Chr11:2160560 | Chy02g00900 | Chy-Chr2:5816503 | 4.56E-48 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18672 | PF13911 | AhpC-TSA_2 | 8.10E-15 | CL0172 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g00230 | - | - | csv:101208422 | 461.07 |