Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00230 ATGAATTCAATTTCTGCTCACACCCATAACCCTTTTCGATCTGCTTCTCATTCAATTTTCCCCTCTTTCACTTTCAACTTCCCTTCCCAACTTCCCTCTCATCCGTTTCTCAATCCTATTTCTCCCAATTGCATCCTCAATTCTGCAAGATTACGGACCCCTAATCCCCATGTTCGTCGCAATTTCAGGTCGTCTCAAGTTCTCAAGGCTTCCACTTCTTCTGGGTATGTCCCAGAGATTGGGGAAATTCTCGGCGATGTTCGTATTTTCACTGCTGGTGGTGAGCCAGTTCTGTTCAAGGATCTTTGGGATCAGACGGAGGGAATGGCTGTTGTTGCACTTTTGAGACATTTTGGATGCTTTTGCTGTTGGGAACTTGCTTCCACTCTAAAGGAATCCAAAGAAAGATTTGATTCATCTGGTGTTAAATTAATAGCTGTAGGCATCGGTACTCCAAATAAAGCACGTATCCTAGCCGAGCGGTTGCCTTTTCCAATGGATTGCCTTTATGCTGATCCTGATAGAAAGGCATATGATTTACTAGGTCTATACTATGGCTTTGGTCGTACATTCCTTAATCCAGCTAGTGTCAAGGTGTTTTCAAAGGCGAGATTGGACGTTATGCGAGAAGCCATGAAAAACTATACTTTTGAAGCTACCCCGGACGATAAAAGCAGCGTGTTGCAGCAGGGGATAAGGATGAGAAAATGGGGGAAATGGGTTGCCGAAATTCGAGAACCCAATAAACGCTCTCGAATTTGGCTGGGTTCTTATTCCTCCCCCGTCGCTGCCGCCCGTGCTTACGACTCCGCCGTCTTCCACCTCCGTGGCCCCACCGCTCGCCTTAATTTCCCTGACTTTTTAACCACCACCGTTGACCGTGGCTCCTCCTTCCCTCTCTCCGCCGCTGCTGTCCGCAAGATCGCTGCCGAAGTCGGCGCTCAGGTCGACGCCCTTGAGTCGTCTCGCCGTCATTCTTCCGACCAAAGTTGTTCTGTCAACCCCACCAAGCTTCGTTGCTGTTCTTATTCTTGTTCAAGTGGGTTTTCCGATCGGGTCGACTTGAATAAATTTCCCGACCCGGAGGATTCCGATGGCGACTGCGTTAGTACTCATTGGACAAGCTGA 1128 48.32 MNSISAHTHNPFRSASHSIFPSFTFNFPSQLPSHPFLNPISPNCILNSARLRTPNPHVRRNFRSSQVLKASTSSGYVPEIGEILGDVRIFTAGGEPVLFKDLWDQTEGMAVVALLRHFGCFCCWELASTLKESKERFDSSGVKLIAVGIGTPNKARILAERLPFPMDCLYADPDRKAYDLLGLYYGFGRTFLNPASVKVFSKARLDVMREAMKNYTFEATPDDKSSVLQQGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDSAVFHLRGPTARLNFPDFLTTTVDRGSSFPLSAAAVRKIAAEVGAQVDALESSRRHSSDQSCSVNPTKLRCCSYSCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS* 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2160560 2165994 - Chy11G188100.1 Chy11g00230 235991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00230 375 CDD AP2 229 286 IPR001471 GO:0003700|GO:0006355
Chy11g00230 375 PRINTS Ethylene responsive element binding protein signature 267 287 IPR001471 GO:0003700|GO:0006355
Chy11g00230 375 PRINTS Ethylene responsive element binding protein signature 229 240 IPR001471 GO:0003700|GO:0006355
Chy11g00230 375 ProSiteProfiles AP2/ERF domain profile. 228 285 IPR001471 GO:0003700|GO:0006355
Chy11g00230 375 Pfam AP2 domain 230 277 IPR001471 GO:0003700|GO:0006355
Chy11g00230 375 SMART rav1_2 228 291 IPR001471 GO:0003700|GO:0006355
Chy11g00230 375 Pfam AhpC/TSA antioxidant enzyme 130 231 IPR032801 -
Chy11g00230 375 SUPERFAMILY Thioredoxin-like 78 186 IPR036249 -
Chy11g00230 375 Gene3D Glutaredoxin 76 215 - -
Chy11g00230 375 CDD PRX_like2 84 231 - -
Chy11g00230 375 SUPERFAMILY DNA-binding domain 230 286 IPR016177 GO:0003677
Chy11g00230 375 Gene3D AP2/ERF domain 230 286 IPR036955 GO:0003700|GO:0006355
Chy11g00230 375 PANTHER - 63 231 IPR032801 -
Chy11g00230 375 PANTHER OS03G0729300 PROTEIN 63 231 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g00900 Chy11g00230 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01559 Chy-Chr3:17756196 Chy11g00230 Chy-Chr11:2160560 3.76E-45 dispersed
Chy07g00155 Chy-Chr7:1318631 Chy11g00230 Chy-Chr11:2160560 1.86E-47 dispersed
Chy07g00292 Chy-Chr7:2369808 Chy11g00230 Chy-Chr11:2160560 6.22E-24 dispersed
Chy11g00230 Chy-Chr11:2160560 Chy04g00679 Chy-Chr4:8084541 7.69E-25 dispersed
Chy08g00809 Chy-Chr8:15663948 Chy11g00230 Chy-Chr11:2160560 4.80E-18 transposed
Chy11g00230 Chy-Chr11:2160560 Chy02g00900 Chy-Chr2:5816503 4.56E-48 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18672 PF13911 AhpC-TSA_2 8.10E-15 CL0172 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00230 - - csv:101208422 461.07