Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00234 ATGAGAGGGATTAGTAGAATGGTAAGCTCTTTTGTGGGTTTTGTTCTTGTTTTGACAACTTTGTTGGCGGTTGTTCCCACGACCGAGGCGCAGCTCCGACGAGATTTCTATGCCGATGTATGCCCTAACGTCGAGAGTATAGTTCGAAGCGCTGTGACGAAGAAGTTCAAACAAACGTTTGTTACTGTTCCTGCTACTCTTCGCCTCTTCTTTCATGACTGCTTTGTTCAGGGATGTGATGCGTCAGTGATGATCGCTTCAGATGGAAGCAACACGGCAGAGAAGGATCATCCTGATAATCTTTCGTTAGCCGGTGATGGATTCGATACTGTTATCAAAGCTAAAGCAGCAGTTGACGCTGTACCAGGATGTAAAAACAAAGTCTCATGTGCTGATATTCTCGTCATGGCTACTCGAGATGTCATTTCATTGGCGAGAGGACCTTCGTATGCAGTGGAGCTAGGAAGAAAAGATGGGCTCGTTTCCAGGGCTTCAGATGTTGAAGGAAAATTGCCTCAACCATCCTTCAATCTCAATCAACTTAATGCTATGTTTGCTGCCAATGGTCTTTCTCAAGCTGACATGATTGCTCTCTCTGCGGCACACACGGTAGGATTCTCCCATTGCAGCAAGTTTGCAAACAGAATCTACAATTTCAGTCGAACAAATCCAGTTGATCCAACGTTAAATCCAACGTATGCAAAAAAGCTTCAAGATATGTGTCCCCAAGATGTGGATCCAAGGATAGCCATTGACATGGATCCCAACACCCCCAGAAGGTTTGATAACATGTACTTCAAAAATCTTCAACAAGGAATGGGCCTTTTCACTTCTGACCAAATCCTCTTCACTGACCGAAGGTCTAAGTCCACTGTCAACATCTGGGCACATAGTGGTCGAACCTTCTACACAGCCTTCATTGATGCCATGACCAAGTTGGGTCGGGTCGGTGTCAAGACCGGATCCGATGGTAACATTCGTACTGATTGTGGTGTTTTCAACTCTTAA 1008 45.14 MRGISRMVSSFVGFVLVLTTLLAVVPTTEAQLRRDFYADVCPNVESIVRSAVTKKFKQTFVTVPATLRLFFHDCFVQGCDASVMIASDGSNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPGCKNKVSCADILVMATRDVISLARGPSYAVELGRKDGLVSRASDVEGKLPQPSFNLNQLNAMFAANGLSQADMIALSAAHTVGFSHCSKFANRIYNFSRTNPVDPTLNPTYAKKLQDMCPQDVDPRIAIDMDPNTPRRFDNMYFKNLQQGMGLFTSDQILFTDRRSKSTVNIWAHSGRTFYTAFIDAMTKLGRVGVKTGSDGNIRTDCGVFNS* 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2187809 2189760 - Chy11G188140.1 Chy11g00234 235995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00234 335 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00234 335 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00234 335 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00234 335 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00234 335 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00234 335 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00234 335 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00234 335 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00234 335 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00234 335 PANTHER - 15 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00234 335 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g00234 335 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g00234 335 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g00234 335 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g00234 335 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g00234 335 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
Chy11g00234 335 PANTHER PEROXIDASE 15 334 - -
Chy11g00234 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Chy11g00234 335 SUPERFAMILY Heme-dependent peroxidases 31 334 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy11g00234 335 CDD secretory_peroxidase 31 333 IPR033905 GO:0004601|GO:0042744
Chy11g00234 335 ProSiteProfiles Plant heme peroxidase family profile. 31 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g00234 335 Pfam Peroxidase 48 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g00234 335 Gene3D - 35 334 - -
Chy11g00234 335 Gene3D Peroxidase, domain 2 172 313 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00854 Chy-Chr2:5455470 Chy11g00234 Chy-Chr11:2187809 0 dispersed
Chy02g02553 Chy-Chr2:28790326 Chy11g00234 Chy-Chr11:2187809 2.49E-89 dispersed
Chy03g00106 Chy-Chr3:1038024 Chy11g00234 Chy-Chr11:2187809 7.29E-147 dispersed
Chy04g00298 Chy-Chr4:2695692 Chy11g00234 Chy-Chr11:2187809 3.39E-154 dispersed
Chy04g01488 Chy-Chr4:21546024 Chy11g00234 Chy-Chr11:2187809 1.34E-87 dispersed
Chy11g00234 Chy-Chr11:2187809 Chy12g01291 Chy-Chr12:17389527 9.50E-92 dispersed
Chy11g00234 Chy-Chr11:2187809 Chy09g00313 Chy-Chr9:2677518 9.75E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00234 K00430 - csv:101208254 649.432