Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00235 ATGAAATTAGCTCATCCTCTTTTGAGCTTCTTCTTCATTTCCTTTCTTCCTTTATTCTTTACATTCTTTACAGCCACAGCTTTAACGTTTGATTCCTACATTCCCAACCGGAGAATTCTGCATCAGCCGCTCTTTCCTATAGGCTCTGAGCCACCGCCGGAGATTGAATTCTCTCCACCTCCACCACCTCCGCCGGATTCTCCTGCCGATGATCAACCATTTTTCCATGAGCTACCGACGAGTCCAGATCAGAGTCAACCGCCTCCCTCCTCCAGTAATGGAACTATGCCTATCCCGGCTGCTACGGCGCAGCCGTCTAAGCCTACTAAGACTGTTGCGATTGCCATTTCGGTTGGGATTGTGACTTTGGGGATGCTTTCGGCTCTTGCCTTCTTTTTGTATCGTCATCGTGCGAAGCATCCCGGGGAGTCGCAGAAGCTTGTTGGAGGGAGTAATAATCCGGAGAGATTTGTGGAGGATTCGAGAGCGCCTCCTTCGAGTTTTTTTTATATTGGAACTGTTGAGCCGAGTCAGAGCTCTGTTGTGGAGCAGAATGGTGGTAATGGTGCTAATAGTTCGCCTTATCGGAAGCTGAATTCGATTAAGAGGTCGGATCGGTATCGTCCGAGTCCGGAGTTGCAGCCACTACCGCCTTTGCCTAAGCCGCCGGTGTCTATGTCGCCTCCGGCTTTGTCATCTTCTGATGAGGAAAGTCTGGATACGGCATTTCATACTCCGCAATGCTCGTCGATTGTTAGTCATGAGGATGGCTATTTTTCACCGGCTTCTCGCCGGAGTAATTCGGTTAAGAGCTTTTCAGCGGCGAGTTATAAGAATGACCATATGAATTCCAATCCTCCTCCTCCCATTCCGCATTCCAAAAGAACCTCTCCTAAATCGAGATTTTCGGTTTCTTCGACGAAGCGTAAATCGTCTCAGCCTCAGCCACCGCCACCGCCTCCTCCTCCACCGCGTCAGTTTGATGATTTTCGTGATACTCCGAATTCGAAAGAAACAATGCCTTTCTCTGCCACGAGACCTAGATTTTCGAAGCCTCCTCCCCCGCCGAATTTGGCGCTTCTTCAAACAATTAGCAATTCAGCTACATTTCCTCAAGTTCCGCAACCTGCTGGAGCTCCACCTCCTCCTCCGCCTCCGCCGCCTCCTCCCCCACCTCCACCTCCACGGCCGTCGGCGCGTCCGGCCTCTTATTCAACACCACAAAAACTAGGGTTGTCAGAAAACAGAATGTCGGCAGTCACTCCTCCAGACTCCTCTAAATCACAATCCTACTCAACAGCGAGATCAAACTCATCTCCGAAATCCACACCGAGTTCTACGGCAACAAATTCTGCTAAAGAAGACGCTGTCCTAAGCACTAATTCTATGGAGAGGCTGGAAGCAGAAGATGCAGATGGTGCAAAACCGAGATTGAAGCCCTTGCACTGGGACAAAGTACGAGCAACATCGGACCGAGCTACGGTCTGGGATCAACTTAAATCAAGCTCATTCCAATTAAACGAGGATATGATGGAGACACTTTTTGGCTTCAATTCTGCAAATTCTGTTCCCAAAGAAGCCACGAGAAAGTCTGTTCTTCCCCCCGTTGAGAAGGAAAACAGGGTATTAGACCCAAAAAAATCGCAGAACATAGCAATACTTCTAAGAGCACTTAATGTCACGCGTGATGAAGTGATCGAAGCTCTTCTAGATGGTAACCCAGAAGGCTTTGGTACTGAGCTCTTAGAAACTCTTGTAAAGATGGCTCCAACCAAAGAGGAAGAGATAAAACTTAGAGAGTACTGTGGTGATTCTTCAAAATTAGGGACTGCCGAAAGGTTTCTCAAGGCAGTGCTTGAAGTTCCATTTGCCTTTAGAAGAGTTGAGGCAATGCTGTACAGAGCCAATTTTGATTCAGAAGTAAAGTACCTGAGAAAATCTTTCCAAAGCCTTGAGGGTGCAAGTGAAGAATTAAAGAACAGTAGACTTTTTCTTAAACTCCTTGAAGCAGTTCTCAAGACAGGAAATAGGATGAATGTTGGTACGAATCGCGGTGATGCTAAAGCCTTTAAGCTTGAAACCCTCTTAAAATTAGTAGATATAAAGGGAACAGATGGAAAAACAACATTGCTTCATTTTGTTGTTCAAGAAATCATCAGATCAGAAGGTGGTGCTGATTCAACTAATGACAACCTTCAACCCCGTACGCAAGCTAAAATCGAGGATGAATTCAGAAAGCAGGGCTTGCAAGTTGTGGCTGGACTAAGCAGAGACCTCACCAATGTCAAGAAAGCAGCAGGGATGGACTCAGACGTCTTGAGCAGTTATGTCACAAAGCTCGAAATGGGGCTCGAAAAAGTAAGGTTGGTCTTACAATTCGAAAAGCCAGGAATGCAGGGAAAATTCTTTAACTCAATGAAAACATTCTTGAAAGAGGCAGAAGAGGAAATAGTCAGGATCAAGGCTGATGAAAAACAAGCTTTAACGCTCGTGAAAGCAGTGACGGAGTATTTCCATGGCGATGCAGCTAAGGAAGAAGCCCACCCCTTCCGAATCTTCATGATCGTTCGGGATTTTCTAACCATACTCGATCAAGTATGCAAAGAAGTCGGGAGAATGCAGGACGGAGTAATGGTGGGTGCTGCTAGATCCTTTCGAATATCCGCCACAGCCTCACTCCCAGTCCTCAGCAGGTATAATGTCAGACATGACCGAAGCTCCGACGAGGATAGCTCATCTCCATGA 2745 46.89 MKLAHPLLSFFFISFLPLFFTFFTATALTFDSYIPNRRILHQPLFPIGSEPPPEIEFSPPPPPPPDSPADDQPFFHELPTSPDQSQPPPSSSNGTMPIPAATAQPSKPTKTVAIAISVGIVTLGMLSALAFFLYRHRAKHPGESQKLVGGSNNPERFVEDSRAPPSSFFYIGTVEPSQSSVVEQNGGNGANSSPYRKLNSIKRSDRYRPSPELQPLPPLPKPPVSMSPPALSSSDEESLDTAFHTPQCSSIVSHEDGYFSPASRRSNSVKSFSAASYKNDHMNSNPPPPIPHSKRTSPKSRFSVSSTKRKSSQPQPPPPPPPPPRQFDDFRDTPNSKETMPFSATRPRFSKPPPPPNLALLQTISNSATFPQVPQPAGAPPPPPPPPPPPPPPPPRPSARPASYSTPQKLGLSENRMSAVTPPDSSKSQSYSTARSNSSPKSTPSSTATNSAKEDAVLSTNSMERLEAEDADGAKPRLKPLHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGFNSANSVPKEATRKSVLPPVEKENRVLDPKKSQNIAILLRALNVTRDEVIEALLDGNPEGFGTELLETLVKMAPTKEEEIKLREYCGDSSKLGTAERFLKAVLEVPFAFRRVEAMLYRANFDSEVKYLRKSFQSLEGASEELKNSRLFLKLLEAVLKTGNRMNVGTNRGDAKAFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGGADSTNDNLQPRTQAKIEDEFRKQGLQVVAGLSRDLTNVKKAAGMDSDVLSSYVTKLEMGLEKVRLVLQFEKPGMQGKFFNSMKTFLKEAEEEIVRIKADEKQALTLVKAVTEYFHGDAAKEEAHPFRIFMIVRDFLTILDQVCKEVGRMQDGVMVGAARSFRISATASLPVLSRYNVRHDRSSDEDSSSP* 915
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2211403 2215404 - Chy11G188150.1 Chy11g00235 235996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00235 914 SUPERFAMILY Formin homology 2 domain (FH2 domain) 384 874 - -
Chy11g00235 914 MobiDBLite consensus disorder prediction 228 283 - -
Chy11g00235 914 Gene3D Formin, FH2 domain 462 874 IPR042201 -
Chy11g00235 914 PANTHER FORMIN-LIKE PROTEIN 6 17 914 - -
Chy11g00235 914 MobiDBLite consensus disorder prediction 179 474 - -
Chy11g00235 914 MobiDBLite consensus disorder prediction 402 458 - -
Chy11g00235 914 PANTHER FORMIN-RELATED 17 914 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Chy11g00235 914 ProSiteProfiles Formin homology-2 (FH2) domain profile. 468 889 IPR015425 -
Chy11g00235 914 MobiDBLite consensus disorder prediction 296 311 - -
Chy11g00235 914 MobiDBLite consensus disorder prediction 50 70 - -
Chy11g00235 914 MobiDBLite consensus disorder prediction 211 227 - -
Chy11g00235 914 MobiDBLite consensus disorder prediction 179 198 - -
Chy11g00235 914 MobiDBLite consensus disorder prediction 374 401 - -
Chy11g00235 914 MobiDBLite consensus disorder prediction 87 106 - -
Chy11g00235 914 Coils Coil 810 830 - -
Chy11g00235 914 MobiDBLite consensus disorder prediction 50 106 - -
Chy11g00235 914 SMART it6_source 468 878 IPR015425 -
Chy11g00235 914 MobiDBLite consensus disorder prediction 142 161 - -
Chy11g00235 914 Pfam Formin Homology 2 Domain 472 863 IPR015425 -
Chy11g00235 914 MobiDBLite consensus disorder prediction 312 328 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00845 Chy-Chr2:5378288 Chy11g00235 Chy-Chr11:2211403 6.92E-27 dispersed
Chy08g01021 Chy-Chr8:17390620 Chy11g00235 Chy-Chr11:2211403 1.73E-129 dispersed
Chy10g00056 Chy-Chr10:1398601 Chy11g00235 Chy-Chr11:2211403 4.96E-173 dispersed
Chy10g00942 Chy-Chr10:15003808 Chy11g00235 Chy-Chr11:2211403 4.66E-91 dispersed
Chy11g00235 Chy-Chr11:2211403 Chy11g00585 Chy-Chr11:6671338 4.49E-126 dispersed
Chy11g00235 Chy-Chr11:2211403 Chy02g02115 Chy-Chr2:25463736 2.79E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00235 - - csv:101208011 1527.69