Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g00244 | ATGTTCTCAGAGTTGATGAACTTTCTGAGAGCTTGTTTTCGACCGAGGTCGGATCAACATGTACACAAAGGTTCCGATGCTGGTGGTCGACAGGATGGTCTCCTATGGTACAAAGATAGTGGGCAGCATGCCAATGGTGAGTTTTCAATGGCTGTAGTTCAGGCTAACAATTTACTTGAGGATCAAAGCCAGATGGAGTCAGGCAATTTGAGCTTGCACGAGGCCGGGCCATATGGTACTTTTGTTGGTGTGTATGATGGGCATGGAGGGCCCGAGACATCTCGTTATGTAAATGATCACCTTTTCCAGCATCTTAAAAGGTTGACTTCAGAGCAACAATCCATGTCAGTGGATGTCATACGGAAGGCATTTCAAGCTACTGAAGAGGGGGTCATTGCTCAAGTTTCAAAACAATGGTCAATAAGGCCACAAATTGCAGCTGTTGGATCTTGCTGCCTTGTTGGCGTAATTTGTGGTGGAACCCTTTACATTGCCAACCTTGGCGATTCACGAGCTGTTTTAGGGAGAGTTGTAAAGGCGACAGGGGAAGTTTTGTCCGTTCAGTTGTCAGCTGAGCATAATGCTTCTATAGAGTCTGTGAGGCAGGAGCTCCGTGCCCTGCATCCTGATGATCCACAGATTGTAGTCTTGAAGCATAATGTATGGCGCGTTAAGGGCCTTATACAGGTTTCTCGATCTATTGGCGATGTCTATTTAAAGAGAGCTGAGTTTAACCGAGAGCCTCTTTATGCTAAGTTTCGCCTTCGTGAACCTATCAAAAAGCCCATACTGAGCGCCGAACCATCTATTTCAGTGCTCCAATTGCAGCCACAGGATCAATTTATTATATTTGCTTCAGATGGGCTCTGGGAACACCTTAGCAATCAGGAAGCTGTTGATATTGTCCAAAACCATCCACGTAATGGAAGTGCAAGGAGGCTGGTGAAAGCAGCACTACAAGAGGCAGCAAAGAAGAGAGAAATGAGATACTCAGATTTGAAGAAGATTGACCGGGGGGTACGGCGACATTTCCACGATGACATCACAGTGATTGTTGTTTTTCTTGACTCAAACCTTGTGAGCCGAGCTAGCTCTACAAAATGTGCAAGCCTATCAGTGCGAGGGGGTGGAGTTAACTTACGTCCAAACTCATTGGCCCCCTGCACCACACCATCAGACACTGGCATGGCCTGA | 1194 | 46.57 | MFSELMNFLRACFRPRSDQHVHKGSDAGGRQDGLLWYKDSGQHANGEFSMAVVQANNLLEDQSQMESGNLSLHEAGPYGTFVGVYDGHGGPETSRYVNDHLFQHLKRLTSEQQSMSVDVIRKAFQATEEGVIAQVSKQWSIRPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLSVQLSAEHNASIESVRQELRALHPDDPQIVVLKHNVWRVKGLIQVSRSIGDVYLKRAEFNREPLYAKFRLREPIKKPILSAEPSISVLQLQPQDQFIIFASDGLWEHLSNQEAVDIVQNHPRNGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRASSTKCASLSVRGGGVNLRPNSLAPCTTPSDTGMA* | 398 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2291313 | 2293789 | - | Chy11G188240.1 | Chy11g00244 | 236005 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g00244 | 397 | SMART | PP2C_4 | 39 | 353 | IPR001932 | - | |
Chy11g00244 | 397 | ProSitePatterns | PPM-type phosphatase domain signature. | 81 | 89 | IPR000222 | GO:0043169 | |
Chy11g00244 | 397 | SUPERFAMILY | PP2C-like | 59 | 356 | IPR036457 | - | |
Chy11g00244 | 397 | PANTHER | ALPHABET, ISOFORM E-RELATED | 5 | 387 | - | - | |
Chy11g00244 | 397 | Pfam | Protein phosphatase 2C | 79 | 324 | IPR001932 | - | |
Chy11g00244 | 397 | PANTHER | PROTEIN PHOSPHATASE 2C FAMILY PROTEIN | 5 | 387 | - | - | |
Chy11g00244 | 397 | Gene3D | - | 35 | 367 | IPR036457 | - | |
Chy11g00244 | 397 | ProSiteProfiles | PPM-type phosphatase domain profile. | 47 | 355 | IPR001932 | - | |
Chy11g00244 | 397 | CDD | PP2Cc | 48 | 355 | IPR001932 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy01g00665 | Chy11g00244 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy04g02107 | Chy-Chr4:26420099 | Chy11g00244 | Chy-Chr11:2291313 | 0 | dispersed | |
Chy06g02254 | Chy-Chr6:26572802 | Chy11g00244 | Chy-Chr11:2291313 | 0 | dispersed | |
Chy10g00608 | Chy-Chr10:12662172 | Chy11g00244 | Chy-Chr11:2291313 | 0 | dispersed | |
Chy01g00118 | Chy-Chr1:763429 | Chy11g00244 | Chy-Chr11:2291313 | 4.00E-144 | transposed | |
Chy04g01778 | Chy-Chr4:24116138 | Chy11g00244 | Chy-Chr11:2291313 | 1.39E-142 | transposed | |
Chy11g01577 | Chy-Chr11:22324863 | Chy11g00244 | Chy-Chr11:2291313 | 6.01E-157 | transposed | |
Chy01g00665 | Chy-Chr1:4773126 | Chy11g00244 | Chy-Chr11:2291313 | 0 | wgd | |
Chy11g00244 | Chy-Chr11:2291313 | Chy02g00538 | Chy-Chr2:3239014 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g00244 | - | - | csv:101221640 | 782.326 |