Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g00253 | ATGGAAGATGGGGAGCTTGAATCCTCAAACCCGGAAGTGTTTTCGAGTTCGAATGCCATTGAGCTTCCGAGTAGTTGCTCAATGGATAGCTTCTTTGATGAAATTCTGAAGGATACTCATGCTTGTACACATGCTCATACTTGCAACCCTCCTGGTCCTGATTATTCACATACACATACCTGTTTTCATGTTCATACGAAAATTGTTTCTTCCCCCACCGAAGAAAAGGTTTCCACTGATGATACAGCGGATTCTGTGGATAAAAAGAATAAGAAGCGCCCATTAGGTAATCGTGAAGCAGTTCGTAAATACCGGGAGAAGAAAAAGGCAAGGGCTGCCTCATTGGAAGATGAAGTTGTGAGATTGAGAGCCCTGAATCAGCAACTGTTGAAGAGATTGCAAGGTCAGGCTGCATTGGAGGCTGAGATTTCTAGGCTCAAATGTTTGCTTGTGGATATTCGGGGAAGAATTGAAGGGGAGATTGGAAACTTTCCATATCAGAAACCAGCCAATTCAAATCCGCCCAATCAGAATGTGTCTGGTAGTTACATGATAAATCCATGTAATGTGGAATGCAATGATCAGGCATATTGCCTTCATCCAGGGCATGATGGAAAAAGTGGAGAGAGCGCTTTGTTGAATGGGCAAAGTTTTAGTTCATGTGACTTTGAAAATCTTCAGTGCTTGGCAAATCAAAACACGGGAGCAAAGGAACCTCCTGACTGTGGACTGGGAAACACAATTGCTAACGTTAATTGTGCAGAAATAAATCCGAAGAAAGAACTAGGAAATGGTGGGATTTCAGTACCTGAGCCATATCAAAACACCTCAAGGAAACTTAGATCTGCCATTCAAGATCATGCTGCTCAATCCAGTACTAATAATAATTATGATCATCTTCTACTATTGCAGCAGTACTCTTTGACTCAATCTGATCTTCATCAATCTCTCACCTCTCTCGTCTCTGAAATGCCTGCCGATCACATCGATCGATTCATTCGATTACAGAGTGAGAGATTTAGATTACTTCTACAACAAAAGATTAATCAACAAATCGGAGTGTTGTTGAACCAGATCGAAACAAGAACGCGCGTTCTGTTTCAGCAGAAGGATGAAGAGATCGCTTGTGCGAATATGAGAAGAATGCATCTCGAACAATTATTGACGAGATTACAAATGGAGAATCAAGAACGGAAGAAATCCGTACAAGAGAATCAAGCAATGGTAGCCTCGCTTAGTCGCGCACTCAATCAAATCAGAGAAAAAGTTTCATTATCCGCGAACGACGCTGAATCTAACAACAACAACAACAATAACAACTACAGAAACGGAGAAGACGACGCCATTGATTACGGAAAAAAGAAGAAAAAGAAGAAGAAAATGATGATTTGTAAAATCTGCAACTCTCGAGTTTCGTGCGTTCTGTTGTTGCCTTGCAGGCACCTCTGTTCGTGTAAGCCATGCGAGAGTACTCTCGATTTTTGCCCCGTCTGCAACACGACGAAGAAAGCCAGCATCGAGGCTGTGATTTTCTAG | 1536 | 41.99 | MEDGELESSNPEVFSSSNAIELPSSCSMDSFFDEILKDTHACTHAHTCNPPGPDYSHTHTCFHVHTKIVSSPTEEKVSTDDTADSVDKKNKKRPLGNREAVRKYREKKKARAASLEDEVVRLRALNQQLLKRLQGQAALEAEISRLKCLLVDIRGRIEGEIGNFPYQKPANSNPPNQNVSGSYMINPCNVECNDQAYCLHPGHDGKSGESALLNGQSFSSCDFENLQCLANQNTGAKEPPDCGLGNTIANVNCAEINPKKELGNGGISVPEPYQNTSRKLRSAIQDHAAQSSTNNNYDHLLLLQQYSLTQSDLHQSLTSLVSEMPADHIDRFIRLQSERFRLLLQQKINQQIGVLLNQIETRTRVLFQQKDEEIACANMRRMHLEQLLTRLQMENQERKKSVQENQAMVASLSRALNQIREKVSLSANDAESNNNNNNNNYRNGEDDAIDYGKKKKKKKKMMICKICNSRVSCVLLLPCRHLCSCKPCESTLDFCPVCNTTKKASIEAVIF* | 512 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2378919 | 2385988 | - | Chy11G188330.1 | Chy11g00253 | 236014 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g00253 | 511 | Coils | Coil | 384 | 422 | - | - | |
Chy11g00253 | 511 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 87 | 134 | IPR004827 | GO:0003700|GO:0006355 | |
Chy11g00253 | 511 | PANTHER | CCAAT/ENHANCER BINDING PROTEIN | 1 | 240 | - | - | |
Chy11g00253 | 511 | SMART | brlzneu | 85 | 152 | IPR004827 | GO:0003700|GO:0006355 | |
Chy11g00253 | 511 | MobiDBLite | consensus disorder prediction | 77 | 96 | - | - | |
Chy11g00253 | 511 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 432 | 509 | IPR013083 | - | |
Chy11g00253 | 511 | PANTHER | BASIC LEUCINE ZIPPER 23 | 1 | 240 | - | - | |
Chy11g00253 | 511 | MobiDBLite | consensus disorder prediction | 72 | 96 | - | - | |
Chy11g00253 | 511 | Pfam | Basic region leucine zipper | 87 | 142 | IPR004827 | GO:0003700|GO:0006355 | |
Chy11g00253 | 511 | ProSiteProfiles | Zinc finger RING-type profile. | 464 | 499 | IPR001841 | - | |
Chy11g00253 | 511 | Coils | Coil | 98 | 132 | - | - | |
Chy11g00253 | 511 | SUPERFAMILY | Leucine zipper domain | 89 | 135 | IPR046347 | GO:0003700|GO:0006355 | |
Chy11g00253 | 511 | Gene3D | - | 75 | 153 | - | - | |
Chy11g00253 | 511 | MobiDBLite | consensus disorder prediction | 426 | 449 | - | - | |
Chy11g00253 | 511 | MobiDBLite | consensus disorder prediction | 426 | 444 | - | - | |
Chy11g00253 | 511 | Pfam | Zinc finger, C3HC4 type (RING finger) | 463 | 501 | - | - | |
Chy11g00253 | 511 | CDD | bZIP | 91 | 144 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy01g00682 | Chy11g00253 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy07g00143 | Chy-Chr7:1237203 | Chy11g00253 | Chy-Chr11:2378919 | 4.70E-16 | dispersed | |
Chy11g00253 | Chy-Chr11:2378919 | Chy01g00750 | Chy-Chr1:5556542 | 6.70E-06 | dispersed | |
Chy01g00682 | Chy-Chr1:4948386 | Chy11g00253 | Chy-Chr11:2378919 | 5.00E-140 | transposed | |
Chy01g00679 | Chy-Chr1:4917315 | Chy11g00253 | Chy-Chr11:2378919 | 4.38E-40 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18673 | PF07716 | bZIP_2 | 2.90E-14 | CL0018 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g00253 | K25785 | - | csv:101219501 | 523.472 |