Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00271 ATGGGTTCTGTAAACTTGCCGCCGTCCATGACGGTGCTAAAATGGCTAGGATTTGTGTCCGCCGTATGGGTTCAGGCGATTTCTGGCAACAACTACACTTTCTCCAATTACTCCGACGCCTTGAAATCTCTGATGAATCTAACCCAACTTCAACTCAATAATCTGTCCGTGGCCAAAGACGTTGGGAAAGCGTTTGGACTTCTGGCCGGAATCGCTAGTGATAAGTTTCCGACTTGGGTGATTTTGCTTATTGGATCTGTTGAAGGTCTTGTTGGGTATGGCACTCAATGGCTTGTTGTTAGTCGCAGGATCTCTCCTCTTCCTTATTGGCAGATGTGCATCTTCTTGTGTATGGGTGGAAACAGCACGACATGGATGAACACGGCGGTGCTAGTAACATGCATCAGAAACTTCCGGAAGAATCGCGGCCCAGTTTCCGGCATTCTCAAAGGTTACGTCGGTCTCAGCACCGCCATTTTCACGGATCTCTGTTTTGCTTTGTTTTCCTCCGACCCATCTTCTTTCCTCCTCATGCTCTCCTTGGTCCCTTTCGCCGTCTGTTTCTTCGCCATGTTCTTCCTCCGTGAAATCCCAACTCAAACCACCATCACCGCCGCCGATACCCAACAAGAATCCAATTACTTTTCCGTCTTCAACGCTCTTGCTGTCGTCGTCGCCGTTTATCTCTTATGTTTCGACTTCGTCAAAAACTCCGGCAGACTCATCTCCCAATTATACTCAATTGGGCTTCTGATTCTCCTTGGATCCCCTTTGATTATCCCAATTTACTCATTTTTCAAGAGCTGGAACTCGATTCGGAGCCGGTTGGATCTGGAGGAGCCGCTAGTGAAAGAAGAAGTGGTAACAGGGGCGGTGAAGGAGGAAACAGGGGAAACTGCTGTGATAGAACAGAGAGCGCCGGTGATTGGAGAAGAACATACGATATTTGAAGCGGTGAGAACGATTGATTTCTGGGTGTTGTTCGTGTCGTTTTTGTGTGGAGTTGGAACGGGATTGGCGGTGATGAACAATATGGGTCAGATCGGATTGGCTCTGGGTTACGCGGATGTATCCATGTTCGTTTCTCTTACAAGTATTTGGGGATTTTTTGGCCGGATTCTTTCCGGTACAATTTCCGAGCATTTTCTCAAGAAAGCAGGCACTCCAAGGCCTCTATGGAACGCAGCGTCTCAAATTCTAATGACCGTTGGGTACGTTTTGATGGCGATGGCGATGCCAGGGTCTCTCTACATCGGTTCAGTCATTGTTGGAATTTGCTACGGCGTTCGTCTCTCCGTCACTGTCCCTACCGCCTCTGAGCTCTTCGGTCTCAAATACTACGGTCTCATCTACAACATTCTCATCCTCAACCTCCCGATTGGCTCCTTCCTATTCTCAGGCCTTCTCGCAGGGTTTCTCTATGACATGGAGGCGACTCCAACCGAGGGCGGGGGGAACACGTGCATCGGAGGACATTGCTATAGAATTGTGTTTCTTGTGATGGCATTGGCTTGTGTGATTGGGTTTGTTTTGGACATTTGGTTGGCGTTTAGAACCAAAGAGCTTTATTCCAAACTTAAAGCGAACAAGAAATCAAAAAAGGTAAACAACAGCAATAACTCTTAG 1626 47.85 MGSVNLPPSMTVLKWLGFVSAVWVQAISGNNYTFSNYSDALKSLMNLTQLQLNNLSVAKDVGKAFGLLAGIASDKFPTWVILLIGSVEGLVGYGTQWLVVSRRISPLPYWQMCIFLCMGGNSTTWMNTAVLVTCIRNFRKNRGPVSGILKGYVGLSTAIFTDLCFALFSSDPSSFLLMLSLVPFAVCFFAMFFLREIPTQTTITAADTQQESNYFSVFNALAVVVAVYLLCFDFVKNSGRLISQLYSIGLLILLGSPLIIPIYSFFKSWNSIRSRLDLEEPLVKEEVVTGAVKEETGETAVIEQRAPVIGEEHTIFEAVRTIDFWVLFVSFLCGVGTGLAVMNNMGQIGLALGYADVSMFVSLTSIWGFFGRILSGTISEHFLKKAGTPRPLWNAASQILMTVGYVLMAMAMPGSLYIGSVIVGICYGVRLSVTVPTASELFGLKYYGLIYNILILNLPIGSFLFSGLLAGFLYDMEATPTEGGGNTCIGGHCYRIVFLVMALACVIGFVLDIWLAFRTKELYSKLKANKKSKKVNNSNNS* 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2518261 2520986 + Chy11G188510.1 Chy11g00271 236032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00271 541 CDD MFS_Mch1p_like 13 508 - -
Chy11g00271 541 Pfam Nodulin-like 14 262 IPR010658 -
Chy11g00271 541 Gene3D MFS general substrate transporter like domains 10 211 IPR036259 -
Chy11g00271 541 Gene3D MFS general substrate transporter like domains 321 540 IPR036259 -
Chy11g00271 541 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 539 - -
Chy11g00271 541 SUPERFAMILY MFS general substrate transporter 15 520 IPR036259 -
Chy11g00271 541 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 10 539 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy01g00687 Chy11g00271 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g00271 Chy-Chr11:2518261 Chy12g00832 Chy-Chr12:13533243 5.41E-103 dispersed
Chy03g00103 Chy-Chr3:1022800 Chy11g00271 Chy-Chr11:2518261 1.73E-106 transposed
Chy07g01110 Chy-Chr7:16055483 Chy11g00271 Chy-Chr11:2518261 4.29E-83 transposed
Chy07g01584 Chy-Chr7:20019336 Chy11g00271 Chy-Chr11:2518261 1.21E-110 transposed
Chy11g01960 Chy-Chr11:25607842 Chy11g00271 Chy-Chr11:2518261 6.29E-82 transposed
Chy12g00344 Chy-Chr12:3621882 Chy11g00271 Chy-Chr11:2518261 1.07E-81 transposed
Chy01g00687 Chy-Chr1:5016146 Chy11g00271 Chy-Chr11:2518261 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00271 - - csv:101216743 949.888