Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00288 ATGGCGGCGACTGTCTCACCATGGGGAAAGCCCGGAGCATGGGCTTTGGATGCCGAGGAGCACGAGGCAGAGCTTCTCAAGGACCAGGAGGAACAGTCTCGCCACCAGGAGGAACCCAGTGCTGACTTTCCATCCCTTGCCGCCGCGGCCGCCACCAAGCCTAAGAAGAAGAAAGGTCAGTCTATTCCTTTGTCGGAGTTTCAGACTTATGGGGGTCCAAAGCCGTCCGCTCAATCCAGTGATCCGAAGGGTCTTACGGCTGAAGATCTAATGATGCTTCCCACGGGTCCTCGTCAGAGAACGGCGGAGGAGATGGACCGTAACCGGCTTGGTGGTGGGTTCAAGAGTTGGGGTCAGAATAGTTTGTATGACAGAGGGAATCGGTATTCTAACTCGGAAGATTCGCCGAATTCTCGACGGAGTTCTAGGGTTTTTGATGAGTCAAGGAGGACTAATGATGGATCTGATAGAGAATTCAGAAGGGAATCGTTACCCTCTAGGGCTGATGAGATTGATGATTGGGGAGCCGGGAAGAAGCCTATGATGGGTAATGGGTTTGAGAGGAGAGAGAGAGGAGGAGGTGGAGGTTTTTTCGATTCGCACTCGTCGAAAGCCGATGAATCGGATAGTTGGGTATCAAGCAAGAGCTTTACACCTTCTGAAGGTCGGAGATCAGGCGGTTTTGACAGAGAGCGAAGAGGAGGATTTCCCACGAGCGGCGGTGGCGCCGATTCAGACAATTGGGGCAGAAAACCTGATGGGGCTAGAGGTGGAATTGGTGAAAATGGTGGTGGCGCTGATGCGGAGAATTGGGGCAAAAAATCTGAAGGGGTTAGAAGTGGAATTGGTGAGAGGCCGAGGCTTAATCTGCAGCCTCGTTCAGTCCCTTTGAATAATGGGAATCAGGAGGCTTCTGGTGTTGCAGTAAAGCCAAAGGGGTCTAATCCTTTTGGAAATGCAAGACCAAGGGAAGAGGTATTGGCTGAAAAGGGGCAGGATTGGAAGAAGATTGATGAGCAACTCGAATCAATGAAAATTAAGGATACGGTTGAAAGGGCAGAGACACCTAGTGGAGCTTCGTTTGAAAGAAGAAAAGGCTTTGGAGCTCGAAATGGTCGGTCTCCCGATTCAGGAAGGACTTGGAAGAAGCCGGAGTCTGTGGAGTCTCGTCCCCAAAGTGCTGAATTGGTTGAAGATGGACCTGCTGAGGAAAATTGA 1218 51.23 MAATVSPWGKPGAWALDAEEHEAELLKDQEEQSRHQEEPSADFPSLAAAAATKPKKKKGQSIPLSEFQTYGGPKPSAQSSDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQNSLYDRGNRYSNSEDSPNSRRSSRVFDESRRTNDGSDREFRRESLPSRADEIDDWGAGKKPMMGNGFERRERGGGGGFFDSHSSKADESDSWVSSKSFTPSEGRRSGGFDRERRGGFPTSGGGADSDNWGRKPDGARGGIGENGGGADAENWGKKSEGVRSGIGERPRLNLQPRSVPLNNGNQEASGVAVKPKGSNPFGNARPREEVLAEKGQDWKKIDEQLESMKIKDTVERAETPSGASFERRKGFGARNGRSPDSGRTWKKPESVESRPQSAELVEDGPAEEN* 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2625435 2627355 - Chy11G188680.1 Chy11g00288 236049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00288 405 Coils Coil 16 38 - -
Chy11g00288 405 MobiDBLite consensus disorder prediction 18 332 - -
Chy11g00288 405 MobiDBLite consensus disorder prediction 62 83 - -
Chy11g00288 405 MobiDBLite consensus disorder prediction 366 389 - -
Chy11g00288 405 Pfam Plant specific eukaryotic initiation factor 4B 7 370 IPR010433 GO:0003743
Chy11g00288 405 MobiDBLite consensus disorder prediction 346 405 - -
Chy11g00288 405 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 389 IPR010433 GO:0003743
Chy11g00288 405 MobiDBLite consensus disorder prediction 120 138 - -
Chy11g00288 405 MobiDBLite consensus disorder prediction 139 176 - -
Chy11g00288 405 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 389 - -
Chy11g00288 405 MobiDBLite consensus disorder prediction 18 38 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy01g00694 Chy11g00288 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01704 Chy-Chr3:18632910 Chy11g00288 Chy-Chr11:2625435 1.67E-35 dispersed
Chy01g00694 Chy-Chr1:5067234 Chy11g00288 Chy-Chr11:2625435 2.21E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00288 - - csv:101214573 763.451