Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g00291 | ATGAGAGTGGTGGGCTTTAGAGCCATTCTTCGTTATTCCAATGGCAAACCAATGATTTTGATGCATACTCTAAAGTTCACAACTATTGTTCAGCTCGTCGAGATCAATGCTGCTCTCTTGGGAGAAATGGTTCCTGATCACCTTGTAAACATGCCAAAGAACAAGGGAAAGGGAGGAAAGAACAGAAAGAGAGGAAAGAACGAAGCAGATGATGAGAAGCGTGAACTTGTTTTTAAGGAAGATGGTCAGGAGTATGCCCAAGTTCTCAGAATGTTAGGGAATGGTCGATGTGAGGCGATGTGCATCGATGGGACAAAGCGTCTTTGTCATATCCGGGGGAAAATGCACAAAAAAGTTTGGATTGCAGCTGGTGATATAATTCTTGTGGGTCTTCGTGATTACCAGGATGACAAAGCTGATGTTATCCTCAAGTATATGCCTGACGAAGCCAGGCTGTTGAAGGCATATGGGGAACTTCCCGAGAGCACACGTCTCAATGAGGGTATTGCTGGTGATATATATGCCCTTTTTGACTGTGCTGATGATGGAGCAACAACTGTGGCAATGGAAAAGCTTGAAAGGCAAAAAAGGGAGGAAAATGAAACTTCCTCAGCATGTATGATATATGGTGATTTGGCACGAAATCGTGTATTGGCTATAAGATTTCACAATTTACCTCCCTACTATTTTTGTCGATAA | 699 | 42.78 | MRVVGFRAILRYSNGKPMILMHTLKFTTIVQLVEINAALLGEMVPDHLVNMPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIAGDIYALFDCADDGATTVAMEKLERQKREENETSSACMIYGDLARNRVLAIRFHNLPPYYFCR* | 233 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2686624 | 2691626 | - | Chy11G188710.1 | Chy11g00291 | 236052 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g00291 | 232 | SUPERFAMILY | Nucleic acid-binding proteins | 52 | 169 | IPR012340 | - | |
Chy11g00291 | 232 | Hamap | Translation initiation factor 1A [eif1a]. | 66 | 160 | IPR001253 | GO:0003743|GO:0006413 | |
Chy11g00291 | 232 | Gene3D | - | 52 | 205 | IPR012340 | - | |
Chy11g00291 | 232 | TIGRFAM | eIF-1A: translation initiation factor eIF-1A | 64 | 160 | IPR001253 | GO:0003743|GO:0006413 | |
Chy11g00291 | 232 | CDD | S1_IF1A | 83 | 159 | IPR001253 | GO:0003743|GO:0006413 | |
Chy11g00291 | 232 | ProSiteProfiles | S1 domain IF1 type profile. | 72 | 146 | IPR006196 | GO:0003723|GO:0003743|GO:0006413 | |
Chy11g00291 | 232 | Pfam | Translation initiation factor 1A / IF-1 | 82 | 143 | IPR006196 | GO:0003723|GO:0003743|GO:0006413 | |
Chy11g00291 | 232 | PANTHER | EIF-1A | 51 | 179 | IPR001253 | GO:0003743|GO:0006413 | |
Chy11g00291 | 232 | MobiDBLite | consensus disorder prediction | 50 | 73 | - | - | |
Chy11g00291 | 232 | ProSitePatterns | Eukaryotic initiation factor 1A signature. | 91 | 113 | IPR018104 | GO:0003743|GO:0006413 | |
Chy11g00291 | 232 | SMART | eIF1neu4 | 78 | 160 | IPR001253 | GO:0003743|GO:0006413 | |
Chy11g00291 | 232 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 1A-LIKE | 51 | 179 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g00478 | Chy-Chr1:3461190 | Chy11g00291 | Chy-Chr11:2686624 | 1.09E-83 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g00291 | K03236 | - | csv:101214334 | 240.736 |