Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00291 ATGAGAGTGGTGGGCTTTAGAGCCATTCTTCGTTATTCCAATGGCAAACCAATGATTTTGATGCATACTCTAAAGTTCACAACTATTGTTCAGCTCGTCGAGATCAATGCTGCTCTCTTGGGAGAAATGGTTCCTGATCACCTTGTAAACATGCCAAAGAACAAGGGAAAGGGAGGAAAGAACAGAAAGAGAGGAAAGAACGAAGCAGATGATGAGAAGCGTGAACTTGTTTTTAAGGAAGATGGTCAGGAGTATGCCCAAGTTCTCAGAATGTTAGGGAATGGTCGATGTGAGGCGATGTGCATCGATGGGACAAAGCGTCTTTGTCATATCCGGGGGAAAATGCACAAAAAAGTTTGGATTGCAGCTGGTGATATAATTCTTGTGGGTCTTCGTGATTACCAGGATGACAAAGCTGATGTTATCCTCAAGTATATGCCTGACGAAGCCAGGCTGTTGAAGGCATATGGGGAACTTCCCGAGAGCACACGTCTCAATGAGGGTATTGCTGGTGATATATATGCCCTTTTTGACTGTGCTGATGATGGAGCAACAACTGTGGCAATGGAAAAGCTTGAAAGGCAAAAAAGGGAGGAAAATGAAACTTCCTCAGCATGTATGATATATGGTGATTTGGCACGAAATCGTGTATTGGCTATAAGATTTCACAATTTACCTCCCTACTATTTTTGTCGATAA 699 42.78 MRVVGFRAILRYSNGKPMILMHTLKFTTIVQLVEINAALLGEMVPDHLVNMPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIAGDIYALFDCADDGATTVAMEKLERQKREENETSSACMIYGDLARNRVLAIRFHNLPPYYFCR* 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2686624 2691626 - Chy11G188710.1 Chy11g00291 236052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00291 232 SUPERFAMILY Nucleic acid-binding proteins 52 169 IPR012340 -
Chy11g00291 232 Hamap Translation initiation factor 1A [eif1a]. 66 160 IPR001253 GO:0003743|GO:0006413
Chy11g00291 232 Gene3D - 52 205 IPR012340 -
Chy11g00291 232 TIGRFAM eIF-1A: translation initiation factor eIF-1A 64 160 IPR001253 GO:0003743|GO:0006413
Chy11g00291 232 CDD S1_IF1A 83 159 IPR001253 GO:0003743|GO:0006413
Chy11g00291 232 ProSiteProfiles S1 domain IF1 type profile. 72 146 IPR006196 GO:0003723|GO:0003743|GO:0006413
Chy11g00291 232 Pfam Translation initiation factor 1A / IF-1 82 143 IPR006196 GO:0003723|GO:0003743|GO:0006413
Chy11g00291 232 PANTHER EIF-1A 51 179 IPR001253 GO:0003743|GO:0006413
Chy11g00291 232 MobiDBLite consensus disorder prediction 50 73 - -
Chy11g00291 232 ProSitePatterns Eukaryotic initiation factor 1A signature. 91 113 IPR018104 GO:0003743|GO:0006413
Chy11g00291 232 SMART eIF1neu4 78 160 IPR001253 GO:0003743|GO:0006413
Chy11g00291 232 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1A-LIKE 51 179 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00478 Chy-Chr1:3461190 Chy11g00291 Chy-Chr11:2686624 1.09E-83 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00291 K03236 - csv:101214334 240.736