Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g00343 | ATGAAGATCCGTTGTGATGTTTGCGACAAAGAAGAAGCCTCTGTTTTTTGCCCCTCCGATGAAGCCGCCCTCTGCGCCGCCTGTGACCGCCAAGTCCACCGTGCAAACAAGCTCGCCAGTAAACACAACCGTTTCTCTCTCCTCCATTCCTCCGCCTCCGCCTCCGCCGCTGCTACTTCAGAGCCGTTGTGCGATATCTGCCAAATCCGGCGAGCGTTCCTGTTCTGTCGGGAAGACAGAGCAATCCTCTGTAGAGAATGCGACATCCCAATTCACGACACGAGCGAACACACCCAGAAGCACAACCGGTTTCTTCTCACCGGCGTGAAGGTCTCCCCGTCGCCGGCGACTTCTTCTTCTTGTTCCTCCTCCGTGGCAAGCGGCGGCGAGGAAAATGAAGGGTCGTTGAAGAAATGCTCGAGGAAGAGGAGTAAAATGGGGTTTAGCAAAGGATTGGTAATTTCAGAGTATTTGGAGAGTTTGCCTGGTTTATAG | 495 | 53.74 | MKIRCDVCDKEEASVFCPSDEAALCAACDRQVHRANKLASKHNRFSLLHSSASASAAATSEPLCDICQIRRAFLFCREDRAILCRECDIPIHDTSEHTQKHNRFLLTGVKVSPSPATSSSCSSSVASGGEENEGSLKKCSRKRSKMGFSKGLVISEYLESLPGL* | 165 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3109953 | 3112860 | - | Chy11G189230.1 | Chy11g00343 | 236104 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g00343 | 164 | MobiDBLite | consensus disorder prediction | 111 | 130 | - | - | |
Chy11g00343 | 164 | ProSiteProfiles | Zinc finger B-box type profile. | 1 | 47 | IPR000315 | GO:0008270 | |
Chy11g00343 | 164 | PANTHER | B-BOX ZINC FINGER PROTEIN 21 | 1 | 163 | - | - | |
Chy11g00343 | 164 | SMART | bboxneu5 | 59 | 106 | IPR000315 | GO:0008270 | |
Chy11g00343 | 164 | SMART | bboxneu5 | 4 | 47 | IPR000315 | GO:0008270 | |
Chy11g00343 | 164 | CDD | Bbox1_BBX-like | 63 | 106 | - | - | |
Chy11g00343 | 164 | Gene3D | Classic Zinc Finger | 1 | 106 | - | - | |
Chy11g00343 | 164 | ProSiteProfiles | Zinc finger B-box type profile. | 59 | 106 | IPR000315 | GO:0008270 | |
Chy11g00343 | 164 | CDD | Bbox1_BBX-like | 5 | 47 | - | - | |
Chy11g00343 | 164 | Pfam | B-box zinc finger | 61 | 102 | IPR000315 | GO:0008270 | |
Chy11g00343 | 164 | Pfam | B-box zinc finger | 3 | 44 | IPR000315 | GO:0008270 | |
Chy11g00343 | 164 | PANTHER | B-BOX ZINC FINGER PROTEIN 22 | 1 | 163 | - | - | |
Chy11g00343 | 164 | MobiDBLite | consensus disorder prediction | 111 | 143 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g00299 | Chy-Chr1:2124287 | Chy11g00343 | Chy-Chr11:3109953 | 2.90E-36 | dispersed | |
Chy11g00343 | Chy-Chr11:3109953 | Chy11g01928 | Chy-Chr11:25396317 | 7.07E-37 | dispersed | |
Chy01g00751 | Chy-Chr1:5569996 | Chy11g00343 | Chy-Chr11:3109953 | 1.41E-10 | wgd | |
Chy11g00343 | Chy-Chr11:3109953 | Chy03g01411 | Chy-Chr3:16842241 | 2.64E-48 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18676 | PF00643 | zf-B_box | 8.00E-07 | No_clan | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g00343 | - | - | csv:101207039 | 294.664 |