Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g00350 | ATGGCAACTTACTTCTCTAGTTCGAATAACGAAAGGGACACTACTCCCATCCTCTATTCAAGGGGATCTTTGCTCGGTTCGTATGAAGAAACAACAATTCTTCCACGAAATATGATGATGCATGTAAATTCTGGGACATACATGGATTCGTTGCCATCGCAGGCACAAAATGGTTGTGGTCAGATCACGTCGGTTGGAGCAGCAGGAACTACCCAACAGCAGCAAGAGTTTTTATCAAATCTTGGTGGCTCACAAATTGCTGAGCATGATTTTAATACATGGAGAGAAAACCGTAGTGAAATGCTTGGCGCAAACTCGATGCGTGGCCCTACCAATGTTCTTCATGGTGGGCAGAATTTGCAGGGTCAGGGGTTATCCCTTACTCTCAGTACACAAATCCCATCTGCAATCCAAATCCCTTCAATCCCCTACAGAAATTCAGATATGGGTTTAACTTCATTCCTGAGTCCTAATCCGACTAATTCAGGTGAGGATGGCTGCAGAAATGGTGCTTCTAGAGACGAACAGTTGAGAAATGGAGAAAACTTGCCACCTAATTTTCAAGAATTGGCTAAGGGTGAAATATCTCAATACAGCATGTCTACTATTGCAAGAACTATGCCCAACTCAAAGTACCTCAAGGCAGCTCAACAACTGCTTGATGAGGTTGTTAATGTCAGGAAAGCTTTGAAGCGGCCTAATAATGATAGAAACCAGAGTTCACATGAGCATGAAACTAGAAGTGCAAAGAACGGTGACACAGGAACCAAAAATGACAGTTCGATGCTCACTGCAAGTGGAACATCTTCAAACCCTCAAGAAACTGGGAGCAATTCAACGTGTGAGCTCTCCCATGCCGAAAAGCAAGATTTGCAGAACAAGTTGACTAAGCTCTTATACATGCTGGATGAGGTTGATAGAAGGTACAATCAGTACTATCATCAGATGCAGATTGTGGTGTCATCCTTTGATGTGATAGCTGGATGTGGGGCATCTAAGCCATATACTGCACTTGCACTCCAGACCATATCCCGTCATTTTCGGTGCTTGCGGGATGCAATAGCTGGTCAAGTCAGAACTACCCGTAAAAGCCTGGGAGAGCATGAGAATTCTGGAAGTGACAAGGGAGTTGGAATCACTCGTCTCCGATATGTGGACCAGCAGTTAAGGCAACAGAGGGCACTTCAGCAGCTTGGTATGATACAGCAGCATGCATGGAGGCCTCAAAGAGGGTTGCCTGAGAACTCTGTTTCAATTCTCCGTGCTTGGCTGTTCGAGCATTTCCTGCATCCGTATCCAAAGGATTCTGATAAGATCATGCTGGCAAGGCAGACAGGCTTGACTAGAAGTCAGGTTTCTAATTGGTTTATCAATGCACGTGTACGTCTTTGGAAACCTATGGTAGAGGAGATGTACAAGGAAGAAATAGGCAGCGTAGACATGGACTCTATATCATCATCTGAAAATGCTGGGAAGGCAACAAAAGGAGATAACAAGACCTTTGACGATGATAAAGAGGAGGATCTACAACAAAGTGCAAGTTCAACAGCCACCGAAAGATGTAGCGCTGGAGATATTATCGACTTAAAATCTGATCAAGTCTCTAATCTTGGAAATTCATGTTCCAACAGAGTAGCTAGTTTCCAAAATGGAGCTCACATTGAAGCTCGAAACGAGCTGGCAAAGCCAAACGATGAGTTAAGGCCTAATGTAAATAACTCTAGTTTCTTTCCTGATGCAATTGTCCACTCTCAGGGTGAGAGTGACAGATTTATGGCTGCTGCCGCCGCCTATCACATGTCTGAATTGGGAAGATTCGGGACGGTTGGCGGGGTGTCGCTTACGCTGGGTTTGCAGCATTGTGAGGGTGGTGGCCTACCATTGCCTGCTGGGACACATCATGGTTTTGCAGCCATGAGAGGAGACGATATGTACAATGCCGCAGCATCTTCCCTCGGGGAAACAGTGCATTTTGAATGCGTAAATAGTGGGAATCCGCAACCGAGGTTTGGCCCTTCCCATCTTTATCATGATTTTGTTGTGTAA | 2046 | 45.06 | MATYFSSSNNERDTTPILYSRGSLLGSYEETTILPRNMMMHVNSGTYMDSLPSQAQNGCGQITSVGAAGTTQQQQEFLSNLGGSQIAEHDFNTWRENRSEMLGANSMRGPTNVLHGGQNLQGQGLSLTLSTQIPSAIQIPSIPYRNSDMGLTSFLSPNPTNSGEDGCRNGASRDEQLRNGENLPPNFQELAKGEISQYSMSTIARTMPNSKYLKAAQQLLDEVVNVRKALKRPNNDRNQSSHEHETRSAKNGDTGTKNDSSMLTASGTSSNPQETGSNSTCELSHAEKQDLQNKLTKLLYMLDEVDRRYNQYYHQMQIVVSSFDVIAGCGASKPYTALALQTISRHFRCLRDAIAGQVRTTRKSLGEHENSGSDKGVGITRLRYVDQQLRQQRALQQLGMIQQHAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEIGSVDMDSISSSENAGKATKGDNKTFDDDKEEDLQQSASSTATERCSAGDIIDLKSDQVSNLGNSCSNRVASFQNGAHIEARNELAKPNDELRPNVNNSSFFPDAIVHSQGESDRFMAAAAAYHMSELGRFGTVGGVSLTLGLQHCEGGGLPLPAGTHHGFAAMRGDDMYNAAASSLGETVHFECVNSGNPQPRFGPSHLYHDFVV* | 682 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3195879 | 3198855 | + | Chy11G189300.1 | Chy11g00350 | 236111 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g00350 | 681 | MobiDBLite | consensus disorder prediction | 150 | 167 | - | - | |
Chy11g00350 | 681 | ProSiteProfiles | 'Homeobox' domain profile. | 403 | 466 | IPR001356 | GO:0003677 | |
Chy11g00350 | 681 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 68 | 629 | - | - | |
Chy11g00350 | 681 | MobiDBLite | consensus disorder prediction | 483 | 517 | - | - | |
Chy11g00350 | 681 | MobiDBLite | consensus disorder prediction | 231 | 285 | - | - | |
Chy11g00350 | 681 | Gene3D | - | 401 | 479 | - | - | |
Chy11g00350 | 681 | PANTHER | BEL1-LIKE HOMEODOMAIN PROTEIN 10 | 68 | 629 | - | - | |
Chy11g00350 | 681 | SMART | HOX_1 | 406 | 470 | IPR001356 | GO:0003677 | |
Chy11g00350 | 681 | SUPERFAMILY | Homeodomain-like | 407 | 474 | IPR009057 | - | |
Chy11g00350 | 681 | MobiDBLite | consensus disorder prediction | 495 | 510 | - | - | |
Chy11g00350 | 681 | CDD | homeodomain | 406 | 467 | IPR001356 | GO:0003677 | |
Chy11g00350 | 681 | SMART | prehox3 | 201 | 356 | IPR006563 | - | |
Chy11g00350 | 681 | MobiDBLite | consensus disorder prediction | 231 | 252 | - | - | |
Chy11g00350 | 681 | MobiDBLite | consensus disorder prediction | 253 | 285 | - | - | |
Chy11g00350 | 681 | MobiDBLite | consensus disorder prediction | 150 | 186 | - | - | |
Chy11g00350 | 681 | Pfam | Associated with HOX | 208 | 355 | IPR006563 | - | |
Chy11g00350 | 681 | Pfam | Homeobox KN domain | 423 | 462 | IPR008422 | GO:0003677|GO:0006355 | |
Chy11g00350 | 681 | Coils | Coil | 288 | 308 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g02003 | Chy-Chr1:24997152 | Chy11g00350 | Chy-Chr11:3195879 | 7.86E-103 | dispersed | |
Chy05g00203 | Chy-Chr5:1699963 | Chy11g00350 | Chy-Chr11:3195879 | 1.66E-92 | dispersed | |
Chy09g01251 | Chy-Chr9:14557463 | Chy11g00350 | Chy-Chr11:3195879 | 6.02E-73 | dispersed | |
Chy11g00350 | Chy-Chr11:3195879 | Chy12g00801 | Chy-Chr12:12810356 | 3.69E-72 | dispersed | |
Chy11g00350 | Chy-Chr11:3195879 | Chy04g01857 | Chy-Chr4:24758171 | 7.35E-105 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18677 | PF07526 | POX | 3.20E-51 | No_clan | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g00350 | - | - | csv:101205137 | 1324.69 |