Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g00377 | ATGACCGCGTCGGCTCGTTTCAAACGACAGAAAACACACCCTGACAGCCTGAGCTTGTCTTCGGTATCGACTCCGGCAAGTCGGGTCGATCATTTCGAAGATTTAGTTGCACCTGGAGGTTGGCTGGCTAAGTACGAGATCTCCTCTAAAGAGCTTCGAACCAATCCGATGTGTTCGTCCCGAGTAAAGGCAGTTAACTCGACGACTGTGGAGGGAGAGATTCCGAAAAAGATCAGAAAAGGAAAGAACAAAGAAACGAAATCGAAAGTAGATAAAGAAAACAATAATAATGTTGAATGGGATGAGAATGGATCAAAAGATGACAGGTTAGAGAAGAAAATGAAAGAAAAGGTTGAAGAAGAAGATGAAGAATCAAAGGTTACTGAGGAAACAAAGAGATGGAAAAAACACAATAATTCAAAAGGTTCAGAAGAAATTAAAAAAATGGATTATGTTCATGTTCGAGCTCGTCGTGGCCAAGCCACTGATAGCCATAGTCTTGCTGAAAGAGCAAGAAGAGAGAAGATAAGTGAAAGAATGAAGTATTTGCAAAATTTGGTGCCTGGGTGTAACAAAATTGCTGGAAAAGCTGGAATGCTTGATGAAATTATTAATTATGTTCAATCTCTCCAACAGCAAGTTGAGTTCTTATCAATGAAAGTGGCTGCTCTAAATCACAGAGTTGATTTCATCAATGTAGATGATCTCTTGGCCAAGCAGATGTTTCCGACTATAACGGACAATTGTTCATCCTACAATAATCAACTTGGAATAATGGGTTCAAGCTCTCTAACAATTCCACAAACTCCATTGATCAACACCAACTTGTCTTCAATTACTCATTTTGAAGTGTCTTCAACGTGGGGAGGTGAATTACAAAGATTTGAAGAAGGTGGAGGGGGGCCGCCATTGTTGTCACCATCAAGCTTTTTATCTAACCAATGTTCTGTCATTGAAGATGAAAATGAAACATTATTTATGGACCACAAACTTCTTCTTCCATTTTAA | 1008 | 39.29 | MTASARFKRQKTHPDSLSLSSVSTPASRVDHFEDLVAPGGWLAKYEISSKELRTNPMCSSRVKAVNSTTVEGEIPKKIRKGKNKETKSKVDKENNNNVEWDENGSKDDRLEKKMKEKVEEEDEESKVTEETKRWKKHNNSKGSEEIKKMDYVHVRARRGQATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVEFLSMKVAALNHRVDFINVDDLLAKQMFPTITDNCSSYNNQLGIMGSSSLTIPQTPLINTNLSSITHFEVSSTWGGELQRFEEGGGGPPLLSPSSFLSNQCSVIEDENETLFMDHKLLLPF* | 336 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3494250 | 3497069 | - | Chy11G189570.1 | Chy11g00377 | 236138 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g00377 | 335 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Chy11g00377 | 335 | CDD | bHLH_AtBPE_like | 150 | 236 | - | - | |
Chy11g00377 | 335 | PANTHER | TRANSCRIPTION FACTOR BHLH74 | 240 | 327 | - | - | |
Chy11g00377 | 335 | PANTHER | TRANSCRIPTION FACTOR BHLH74 | 2 | 239 | - | - | |
Chy11g00377 | 335 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 158 | 230 | IPR036638 | GO:0046983 | |
Chy11g00377 | 335 | Coils | Coil | 207 | 227 | - | - | |
Chy11g00377 | 335 | SMART | finulus | 166 | 216 | IPR011598 | GO:0046983 | |
Chy11g00377 | 335 | Coils | Coil | 83 | 103 | - | - | |
Chy11g00377 | 335 | Pfam | Helix-loop-helix DNA-binding domain | 164 | 211 | IPR011598 | GO:0046983 | |
Chy11g00377 | 335 | Gene3D | - | 157 | 232 | IPR036638 | GO:0046983 | |
Chy11g00377 | 335 | Coils | Coil | 110 | 131 | - | - | |
Chy11g00377 | 335 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 160 | 210 | IPR011598 | GO:0046983 | |
Chy11g00377 | 335 | MobiDBLite | consensus disorder prediction | 77 | 142 | - | - | |
Chy11g00377 | 335 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 240 | 327 | IPR024097 | GO:0006355 | |
Chy11g00377 | 335 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 2 | 239 | IPR024097 | GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy10g01083 | Chy-Chr10:15909181 | Chy11g00377 | Chy-Chr11:3494250 | 1.10E-40 | dispersed | |
Chy11g00377 | Chy-Chr11:3494250 | Chy07g00212 | Chy-Chr7:1716195 | 1.83E-42 | dispersed | |
Chy01g00774 | Chy-Chr1:5949888 | Chy11g00377 | Chy-Chr11:3494250 | 1.80E-53 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18680 | PF00010 | HLH | 2.60E-06 | No_clan | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g00377 | - | - | csv:101216346 | 587.8 |