Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00438 ATGCCTCCCAACACTCCAATTTTCCTCTCTTTTTTCTTCCTAATTTTTCTCTTCTTCTTTGAACCATCTAATGCTTACATCGAGCTTAGACCTGACTTTTACGATGAGTCGTGCCCCCGTTTGCCGATGATAATTCGTTATCATATTTGGGCTGCTGTCCAAAATGACTCTAGAATGGCTGCCTCACTGTTGCGGTTGAATTTCCATGACTGCATTGTAGACGGATGTGATGCATCAGTGCTGCTTGATGATACGACAGATATGAAAGGTGAGAAAAATGCGCCAGGTAACGTGAAATCGCTTCGAGGATTTGAAGTGATTGATGGGATAAAAGCAGACCTAGAAGCATATTGCCCACAGACAGTTTCATGTGCTGATATTGTGAATCTTGCAGCCAGAGAAGCTGTGTATTTGGTTGGAGGGCCATTTTGGCACCTTCCACTGGGACGTAGAGATGGTTTAACCGCAAGCATAAAATCAGTGCTGGCTCAGCTCCCATCTCCCAAGGCATCTCTAGAGAACAACACCGCCAAGTTCATCTCAAAAGGTCTGGACTTAAAAGATCTCGTCGTGCTTTCAGGAGCCCACACCATCGGCTTCGCCCGCTGCGTCACATTCAAAGGCCGTCTCTTCAACTTCAAAGGCTCCGGAAACCCAGATCCTGACATAAACGCCGCAATGCTCACCGATCTCCGGTCCATGTGCCCCAACAGGAACGACGGCACCGGCGCCAATTTGGCGCCGCTGGATGTGGCCAGTTACGACAGGTTCGACAACGAGTATTTTACCAATCTGATTGGCAATGTTGGGCTTTTAGAGTCGGATCAGGGTCTGATGGGGGACCCCCAGACGGCGAGAATGGTTAGAGAATACAGTTTTGATCCGAATCTGTTCTTCGAGGACTTTGCAGAGTCGATGTTCAGGATGAGTTTGGTTGGGGTTATGACTGGCCGTGAAGGGCAAATTCGAAAGCAATGTGGCGTTGTTAATAATGATGATGGGTATTGA 1008 47.82 MPPNTPIFLSFFFLIFLFFFEPSNAYIELRPDFYDESCPRLPMIIRYHIWAAVQNDSRMAASLLRLNFHDCIVDGCDASVLLDDTTDMKGEKNAPGNVKSLRGFEVIDGIKADLEAYCPQTVSCADIVNLAAREAVYLVGGPFWHLPLGRRDGLTASIKSVLAQLPSPKASLENNTAKFISKGLDLKDLVVLSGAHTIGFARCVTFKGRLFNFKGSGNPDPDINAAMLTDLRSMCPNRNDGTGANLAPLDVASYDRFDNEYFTNLIGNVGLLESDQGLMGDPQTARMVREYSFDPNLFFEDFAESMFRMSLVGVMTGREGQIRKQCGVVNNDDGY* 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4275532 4277785 + Chy11G190180.1 Chy11g00438 236199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00438 335 PANTHER PEROXIDASE 72-RELATED 13 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00438 335 Pfam Peroxidase 47 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g00438 335 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Chy11g00438 335 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g00438 335 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g00438 335 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g00438 335 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g00438 335 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g00438 335 PANTHER PEROXIDASE 10 13 329 - -
Chy11g00438 335 SUPERFAMILY Heme-dependent peroxidases 29 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy11g00438 335 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00438 335 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00438 335 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00438 335 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00438 335 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00438 335 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00438 335 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00438 335 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00438 335 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00438 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Chy11g00438 335 Gene3D - 32 330 - -
Chy11g00438 335 Gene3D Peroxidase, domain 2 166 309 - -
Chy11g00438 335 ProSiteProfiles Plant heme peroxidase family profile. 28 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g00438 335 CDD secretory_peroxidase 28 329 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g00438 Chy-Chr11:4275532 Chy02g00611 Chy-Chr2:3712025 2.63E-100 dispersed
Chy11g01913 Chy-Chr11:25256849 Chy11g00438 Chy-Chr11:4275532 1.18E-66 transposed
Chy11g00438 Chy-Chr11:4275532 Chy02g00924 Chy-Chr2:6081549 7.24E-121 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00438 K00430 - csv:101209504 662.914