Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00474 ATGCTAACCCACCTCTTCCTCCTCTTCCTTGTTTTTCCCTATCTTCCTCTCTTAGTTGACTCAGTTTATTTCAAAATCGATCAAATCGAACCGAACGAAAACCGTTTACTTTACCAAGGAGATGCAGTACCTAATAATGGAGGAATTATATTCAGTGATCCTGCATATTCCTGTCTTGTTGGTCAAGCTATTTACAAAGATGCTATCCCAATTTGGGACTCTCAAACAGAAAAACTCACTGATTTCACAACCCAATTCTCTTTCACCATTGATACTCAAAATGCTTTACACTATGGAAATGGGGTTGCTTTTTTCTTGGCTCCAGCTGGTTTTCATATCCCTCCAAACTCAGCTGGTGGGTATCTTGGCCTTTTCAATAAGACCTATACTGAATCATCCATAAACCAAATTGTTCATGTTGAGTTTGATTCTTACCCTAATGAATGGGATCCTAATTTTGAACATGTGGGTATCAACATTAACTCTGTTTCTTCCTCTAATTTCACAAAGTGGAATGTCAGCTTACATAGTTTGGACACTGTTGACGTGTTTATCTCATATGATTCAACCACCAAATACTTGAGCGTTTCATGGAACTATGAAAAGACACCAACTTCTCTTGAAAATACAACTTTGAGTTACCAGGTTGATCTTATGAAGATTCTTCCTCAATGGGCTACAGTTGGATTTTCAGCTGCAACGGGGGCATATTTAGAGAGACATTTGCTATTTTCTTGGGAGTTCAATTCCAGTTTGGAAATGAAAGAAACAGTTGGAGTTGGTACTGGAAAAAATGGGAAAAAAGTCGATGTAATTGTGGGTGTGACTGTTTCAGTAGGAGCTTCAATTCTCATGGCAATTGTAGCTTTTGTAGTACTTTGGAGATTGAAGCAAAAGAAAAGAAAATCAGAAAAAAAGGTGGCTGAGGAGATCAACTTGACATCCATTAATGATGATTTGGAAAGAGGGGCTGGACCTAGAAGGTTTTCTCATAAGCTTCTTGACATGGCTACCAACAACTTCTCCAATGAAAGGAAGCTTGGTCAAGGAGGATTCGGAGCAGTGTATAGAGGGTATATACCAGACATAGATTTGGCAGTGGCCGTGAAGAAAATCTCAAGGGGTTCGAGACAGGGGAGGAAAGAGTATATAACTGAAGTGAAGGTCATTAGTCGGCTTCGCCATCGAAATTTGGTGCAACTCGTTGGTTGGTGTCATGATAAGGGTGAGTTCTTGTTGGTTTACGAATTCATGCCTAATGGCAGTCTTGATTCTCATCTCTTTGGTAAGAGAGCCCATCTTGCTTGGGCTGTGAGATATAAAATTGCTTTAGGTTTAGCCTCTGCTTTGCTCTATCTTCACGAAGAAGGGGAACAGTGTGTGGTTCATAGAGATATTAAATCAAGTAATGTTATGTTAGATTCGAACTTTAACGTCAAGCTTGGAGATTTTGGGTTGGCTCGATTAATGGACCATGAGTTGGGTGCTCAAACAACTGGGTTGGTTGGAACTTTAGGCTACTTAGCTCCTGAATATATCAGCACAGGTAGAGCTAGTAAAGAATCTGATGTGTTTAGTTTTGGGGTTGTTGCTTTGGAGATTGCCACGGGAAGAATGTCAAGAACCTCCATGGAAGCTGAATCTCATAAGGGTCTGGTGGAGTGGGTTTGGGATCTTTATGGGAGTGCGCAATTGTTTGATGGCATGGATGAGAAATTGCAATCTGATTTTGACAAAAAACAAGTGGAGTGTTTGATGCTTGTTGGATTATGGAGTGCTTATCCTGACCCTAATCTTCGACCTTCCATAAAACAAGTAATTCAAGTTCTTAACTTTGAGACAACGATGCCAAATCTTCCAAATAAAATGCCTATTCCTATCTATCCTGCTCCTCCCACATCGATGAGTTCAAATGAAGCTTCCATTACAGTAAGTCTTGACATGGGTCGTTAA 1953 40.09 MLTHLFLLFLVFPYLPLLVDSVYFKIDQIEPNENRLLYQGDAVPNNGGIIFSDPAYSCLVGQAIYKDAIPIWDSQTEKLTDFTTQFSFTIDTQNALHYGNGVAFFLAPAGFHIPPNSAGGYLGLFNKTYTESSINQIVHVEFDSYPNEWDPNFEHVGININSVSSSNFTKWNVSLHSLDTVDVFISYDSTTKYLSVSWNYEKTPTSLENTTLSYQVDLMKILPQWATVGFSAATGAYLERHLLFSWEFNSSLEMKETVGVGTGKNGKKVDVIVGVTVSVGASILMAIVAFVVLWRLKQKKRKSEKKVAEEINLTSINDDLERGAGPRRFSHKLLDMATNNFSNERKLGQGGFGAVYRGYIPDIDLAVAVKKISRGSRQGRKEYITEVKVISRLRHRNLVQLVGWCHDKGEFLLVYEFMPNGSLDSHLFGKRAHLAWAVRYKIALGLASALLYLHEEGEQCVVHRDIKSSNVMLDSNFNVKLGDFGLARLMDHELGAQTTGLVGTLGYLAPEYISTGRASKESDVFSFGVVALEIATGRMSRTSMEAESHKGLVEWVWDLYGSAQLFDGMDEKLQSDFDKKQVECLMLVGLWSAYPDPNLRPSIKQVIQVLNFETTMPNLPNKMPIPIYPAPPTSMSSNEASITVSLDMGR* 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5054605 5056557 - Chy11G190540.1 Chy11g00474 236235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00474 650 ProSiteProfiles Protein kinase domain profile. 341 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g00474 650 Pfam Protein kinase domain 342 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g00474 650 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 254 IPR013320 -
Chy11g00474 650 Pfam Legume lectin domain 24 256 IPR001220 GO:0030246
Chy11g00474 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Chy11g00474 650 Gene3D Phosphorylase Kinase; domain 1 326 417 - -
Chy11g00474 650 SMART serkin_6 341 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g00474 650 Gene3D - 19 260 - -
Chy11g00474 650 PANTHER - 18 650 - -
Chy11g00474 650 Gene3D Transferase(Phosphotransferase) domain 1 418 631 - -
Chy11g00474 650 CDD lectin_legume_LecRK_Arcelin_ConA 22 252 IPR001220 GO:0030246
Chy11g00474 650 SUPERFAMILY Protein kinase-like (PK-like) 325 635 IPR011009 -
Chy11g00474 650 ProSitePatterns Protein kinases ATP-binding region signature. 347 371 IPR017441 GO:0005524
Chy11g00474 650 CDD STKc_IRAK 347 611 - -
Chy11g00474 650 PANTHER PUTATIVE-RELATED 18 650 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00189 Chy-Chr1:1286559 Chy11g00474 Chy-Chr11:5054605 1.89E-162 dispersed
Chy01g00191 Chy-Chr1:1293004 Chy11g00474 Chy-Chr11:5054605 1.75E-16 dispersed
Chy01g00192 Chy-Chr1:1296575 Chy11g00474 Chy-Chr11:5054605 0 dispersed
Chy06g01586 Chy-Chr6:17995284 Chy11g00474 Chy-Chr11:5054605 2.36E-175 dispersed
Chy06g01890 Chy-Chr6:22748430 Chy11g00474 Chy-Chr11:5054605 2.70E-122 dispersed
Chy11g00465 Chy-Chr11:4997957 Chy11g00474 Chy-Chr11:5054605 1.49E-52 dispersed
Chy11g00467 Chy-Chr11:5010283 Chy11g00474 Chy-Chr11:5054605 3.07E-57 dispersed
Chy11g00471 Chy-Chr11:5039171 Chy11g00474 Chy-Chr11:5054605 0 proximal
Chy11g00472 Chy-Chr11:5040631 Chy11g00474 Chy-Chr11:5054605 1.25E-68 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71539 PF00069 Pkinase 8.30E-49 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00474 - - csv:101204075 1234.94