Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00487 ATGGATACCTGGTTCATCATCATCCTTATCTCCTTCTCCATTTGCTATCTTCTCAGCTCTATTTTTACCAAATTCCAAACCTCCACAAAGCTCCCACCAGGCCCTCCTTCAATCCCCATCCTCTCCACCTTCTTATGGCTCCGTACATCGCCTCTCCAAATGGAGTCTTACCTCCGCACCGCCGTCGCCAAATACGGCCCCATTGTCACTATCCGCATTGGCTCTCGCCCTTCCATCTTCATCGCCGACCGCACCATTGCCCACAAAGCCCTCTTCCAACACGGCGCTCTCTTCGCCGACCGCCCACCGGTTCCTCCTTTAACCAAAATCCTCACAAGCAACCAACACAGTATCAACTCCGCCGCCTACGGCCCACTCTGGCGCCTCCTCCGCCGCAATCTTACTTCCCAAATTCTTCATCCTTCCCGTATTAGATCCTACGGCCATGCTCGCGAGTGGGTTTTGGGTATTCTTCTTAATCGTCTTTTCTCTCACTCTGAATCGGAAAGTTCCGTCTATGTTGTAGATCATTTTCAGTACGCTATGTTCTGTTTAATGGTGTTGATGTGTTTTGGGGATAAACTTGAGGAATCCCAAGTCAAAGAAGTCGAGAATGTGCAACGTACAATGCTGTTAAATTTTAGGCGTTTTGGTCTCCTTAATTTATCTCCTAAATTGACCAAGTTTTTTCTTCCGAAGCGCTGGGAGGAGTTTCTGCAACTAAGAAGGAACCAAGAGAGAGTCATAATCCCGTTAATCGAAGCAAGAAGAGAAGCGATAAAAAGCAGAGCAAACAGAGGGAACAGAGAAGGTGAAGAACAAGAACAAGAAGACGGTAAAGAATTCGTGTCGTCATATGTAGATACACTACTCGAATTACAACTTCCCAACGAGGATAATAGAAAGCTAACGAACAGCGAAATGGTCACATTATGCTCTGAATTCCTCACTGGCGGAACCGATACAACATCCACAACCTTGCAATGGATAATGGCAAATTTAGTGAAAAACCCAAACATTCAGCACAAGCTTTTTACAGAAATGAAAGAAGTAATGGGCGATGGAATAAGGGAGGAAGTGAAGGAAGAGGATTTGGGGAAGCTTCCATATCTAAAAGCAGTGGTTTTAGAAGGATTAAGAAGACACCCACCAGGACATTTCTTACAAGCACGAGGAGTGCAGGAGGATTTACAATTTGAGAATTACTTGATACCCAAAAACGGGACTGTGAATTTCTTGGCGGCGGAGATTGGTCGAGATCCAACAGTGTGGGAAGATCCGATGGCGTTTAAGCCGGAGAGGTTTATGAATGGTGACGGAGGAGAAGAAGCGGCAAGGTTCGATGTAACAGGGAGTAAAGAGATAAAGATGATGCCGTTCGGAGCAGGGAGAAGGATATGTCCTGGTTATGGTTTGGGGATTCTTCATTTGGAATATTTCTTAGCGAATTTATTATGGAAGTTTGATTGGAGAGCTGTGGATGGAGATCATGTTGATCTGTCGGAGAAGTTAGAGTTCACAGTTGTGATGAAAAAGCCTCTCAAAGCAAACATAATTCTGAGGTTTAATTCAGAATTATGA 1581 44.97 MDTWFIIILISFSICYLLSSIFTKFQTSTKLPPGPPSIPILSTFLWLRTSPLQMESYLRTAVAKYGPIVTIRIGSRPSIFIADRTIAHKALFQHGALFADRPPVPPLTKILTSNQHSINSAAYGPLWRLLRRNLTSQILHPSRIRSYGHAREWVLGILLNRLFSHSESESSVYVVDHFQYAMFCLMVLMCFGDKLEESQVKEVENVQRTMLLNFRRFGLLNLSPKLTKFFLPKRWEEFLQLRRNQERVIIPLIEARREAIKSRANRGNREGEEQEQEDGKEFVSSYVDTLLELQLPNEDNRKLTNSEMVTLCSEFLTGGTDTTSTTLQWIMANLVKNPNIQHKLFTEMKEVMGDGIREEVKEEDLGKLPYLKAVVLEGLRRHPPGHFLQARGVQEDLQFENYLIPKNGTVNFLAAEIGRDPTVWEDPMAFKPERFMNGDGGEEAARFDVTGSKEIKMMPFGAGRRICPGYGLGILHLEYFLANLLWKFDWRAVDGDHVDLSEKLEFTVVMKKPLKANIILRFNSEL* 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5185891 5189852 + Chy11G190670.1 Chy11g00487 236248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00487 526 Gene3D Cytochrome P450 24 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00487 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Chy11g00487 526 PANTHER CYTOCHROME P450 6 517 - -
Chy11g00487 526 SUPERFAMILY Cytochrome P450 32 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00487 526 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00487 526 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00487 526 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00487 526 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00487 526 Pfam Cytochrome P450 32 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00487 526 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 517 - -
Chy11g00487 526 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00487 526 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00487 526 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00487 526 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00487 526 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00487 526 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00487 526 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g00487 Chy-Chr11:5185891 Chy11g00492 Chy-Chr11:5267456 0 dispersed
Chy11g00486 Chy-Chr11:5180070 Chy11g00487 Chy-Chr11:5185891 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00487 K24184 - csv:105434706 972.615