Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00489 ATGGGGATTTGGTTCATCATTCTCGTTTCCCTGTGCATCTCTACTCTCTTGATCACCTCTATTTTTACCCATTTTCGAAGCTCCACAAAGCTTCCACCATGCCCACCTTCATTTCCCATCATCACTCATTTCCAGTGGCTCTGCAAATCCCCTCTCCAAATTGAATCTCTTCTCCACAGTTTCTTAGCCAAATATGGCCCTGTCATCACCCTCCCCATTGGCAATCGCCCCGCCATCTTCATTGCCGACCGCTCCATTGCCTTCAAGGCCCTCGTCCTTAACGGTGCTCTCTTCGCCGATCGTCCACCCACCCTACCCATGACCAAGATTGTCTCTAGCAACCAACACAACATCAACAGCGCTCCTTACGGCCCACTCTGGCGCCTCCTCCGACGCAATCTCACTTCCAAAATCCTTCATCCTTCCCGTATCAGTTCATACAGTAAAGCTCGCAAGTGGGTTTTGGATATTCTTTTCAATCGCCTTCACTCTCATTGTGAATCTGGAAACCCCGTCTTATTCATGGAGCATTTTCAGTACGCCATGTTTTGTTTGTTGGTGCTAATGTGCTTCGGGGATAGACTTGATGAATCCAAGATTTTAGAAGTCGAGAACGTGGAGCGAGCGCTTATATTGAGTTTTTCACCTTTCGACATTCTCAATTTTTGGCCTAAACTCACTAAGATTTTACTTCGAAAACGCTGGGAAATGCTTATGCAACTGAGAAGGAACCAAGAAAAGGTCCTAATTCCTTTGATTGAAGCTCGAAGGAAGGTCAATCAAAACAGAGTAAACAGAGCCCAAACGGAAGAAGAAGAAGAATTCGCGATATCATATGTGGACACATTACTCGATTTGGAGCTATCCCACGAGGACAATAGAAAGCTTACTAATGAGGAGATAGTCACCATATGCTCTGAGTTCCTCGTCGGGGGCACCGACACCACCTGCACGGCTCTGCAATGGACACTGGCGAATATTGTGAAAAACCCAAAAATCCAGCACAAGCTCTTCTCAGAAATTAAAGAAGTAATGGGAGATGGACCAGGGAAAGAGGTGAAGGAAGAAGACTTGAAGAAAATTCCATATCTAAAAGCTGTGGTTTTAGAAGGATTAAGAAGACACCCACCAGGACATTTCGTGCTACCACACACAGTGACAGAAGACACGGTGTTGGAAAATTACGTGATACCAAAGAATGGGACAGTGAATTTCATGGTAGCAGAGATGGGTTGGGATTCAAAAGTGTGGAAAGATCCAATGGAGTTTAAGCCGGAGAGGTTCATGAAAGGCGGAGAAGGAGGAGTTGAGTTTGATATAACAGGGAGCAAAGAGATAAAGATGATGCCATTCGGAGTAGGGAGAAGGATGTGTCCTGGATTTGAATTAGCGATTCTTCATATGGAGTATTTCATTGGGAACCTGATATGGAAGTTTGAATGGAAAGAGGTGAAGGGAGAGGAAGTTAGTCTGTCGGAGAAGGTGGCCTTCACGGTGGTTATGGAAAAGCCTCTTAAAGCCAAAATAAATCCCCGGTGA 1539 45.29 MGIWFIILVSLCISTLLITSIFTHFRSSTKLPPCPPSFPIITHFQWLCKSPLQIESLLHSFLAKYGPVITLPIGNRPAIFIADRSIAFKALVLNGALFADRPPTLPMTKIVSSNQHNINSAPYGPLWRLLRRNLTSKILHPSRISSYSKARKWVLDILFNRLHSHCESGNPVLFMEHFQYAMFCLLVLMCFGDRLDESKILEVENVERALILSFSPFDILNFWPKLTKILLRKRWEMLMQLRRNQEKVLIPLIEARRKVNQNRVNRAQTEEEEEFAISYVDTLLDLELSHEDNRKLTNEEIVTICSEFLVGGTDTTCTALQWTLANIVKNPKIQHKLFSEIKEVMGDGPGKEVKEEDLKKIPYLKAVVLEGLRRHPPGHFVLPHTVTEDTVLENYVIPKNGTVNFMVAEMGWDSKVWKDPMEFKPERFMKGGEGGVEFDITGSKEIKMMPFGVGRRMCPGFELAILHMEYFIGNLIWKFEWKEVKGEEVSLSEKVAFTVVMEKPLKAKINPR* 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5208109 5209647 + Chy11G190690.1 Chy11g00489 236250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00489 512 Coils Coil 252 272 - -
Chy11g00489 512 SUPERFAMILY Cytochrome P450 32 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00489 512 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00489 512 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00489 512 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00489 512 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00489 512 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00489 512 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00489 512 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00489 512 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00489 512 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00489 512 Pfam Cytochrome P450 32 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00489 512 PANTHER CYTOCHROME P450 4 511 - -
Chy11g00489 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 511 - -
Chy11g00489 512 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00489 512 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00489 512 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00489 512 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00489 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Chy11g00489 512 Gene3D Cytochrome P450 25 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g00489 Chy-Chr11:5208109 Chy11g00491 Chy-Chr11:5260700 0 dispersed
Chy11g00489 Chy-Chr11:5208109 Chy11g00490 Chy-Chr11:5250885 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00489 K24184 - csv:101204800 1013.83