Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00493 ATGGAGATATGGTTCATCTTCTTAATCTCCCTCTCCATCTGCTCTCTTCTCACCTCCATTTTTACCCATTTCCAAACCTCCACAAAGCTTCCACCAGGCCCTCCTTCAATCCCCATCCTCACCAATTTCCTATGGCTCCGCAGATCCTCCCTCCAAATCGAGTCTCTTCTCCAGAGTTTCGTCGCTAAATATGGTCCTGTTCTCACCCTCCGCATCGGCTCCAGGCCCACTGTCTTCATCGCCGACAGTTCAATTGCCCACAAAATCCTCGTCCAAAACGGTGCTCTCTTTGCTGACCGTCCACCGGCGCTATCCGTTAGCAAAGTCCTGACTTCCAACCAACACAACATAAGCTCTGCTTCTTACGGCCCACTTTGGCGCCTCCTCCGCCGCAATCTCACTTCTCAAATTCTTCATCCTTCTCGTGTCAGATCCTATAGTGAAGCTCGCAAGTGGGTTTTGGATATTCTTCTCAATCGTCTTCAGTCTCAGTCTGAATCTGGAAACCCCGTCTCAGTCGTTGAGAATTTTCAGTATGCCATGTTTTGTTTGTTGGTATTGATGTGTTTCGGGGATAAGCTTGAGGAATCCCAGATTCGGGAAGTCGAGAACGTGGAGCGACAACTTATATTGTGTTTTCAGCGTTTTAACACTCTCAATTTCTGGCCTAAAGTCACAAAGATCTTGTTTCGAAAACGCTGGGAGGCGTTGTTCAAACTAAGAAAGAACCAAGAGAAGGTCCTAACTCGTTTGATCAATGCCCGAAGGAAGGCCAATGAAAACAGGGCCCAAAATGAAGAAGAAGAAATAGTGGTGTCATATGTTGATACGTTGCTTGAATTGGAGCTCCCTGACGAGAAGAGAAAGCTTAATGATGACGAATTAGTTACTTTATGCTCTGAATTCCTCAACGCCGGCACCGATACAACGTCCACAGCCTTGCAGTGGATAATGGCGAATTTAGTGAAATACCCAGAAATCCAAAACAAGCTTTTTGTAGAGATGGAAGGAGTAATGGGAAATGGATCAAGGGAGGAAGTGAAGGAAGAGGTTTTGGGGAAACTTCCATATTTAAAAGCTGTGGTTTTGGAAGGATTAAGAAAACACCCACCAGCGCATTTCGTGCTACCACACGCAGTGAAAGAAGATACAGAGTTGGGAAATTATGTGATACCAAAGAATGCGGCCGTAAATTTCATGGTGGCGGAAATGGGTCGGAATCCGAAAGTGTGGGAAGATCCGACGGCGTTTAATCCAGAGAGGTTCATGAAGGGCGGGAAAGAAAAAGAAGAACAAGTAGCAGAGTTTGATATAACAGGGAGCAAAGAGATAAAGATGATGCCGTTTGGAGCAGGGAGGAGGATATGTCCTGGATTTGGTTTGGCGATTCTTCATTTGGAGTATTTTGTTGCTAATTTGTTATGGCGGTTCGAATGGAAGGTCGTTGATGGAGACGAAGTTGACATGTCGGAGAAGGTAGAGCTCACCGTTGCCATGAAGAATCCTCTGAAAGCTAAAATCCATCCAAGGATCCATACTGAGAGCTGA 1548 45.74 MEIWFIFLISLSICSLLTSIFTHFQTSTKLPPGPPSIPILTNFLWLRRSSLQIESLLQSFVAKYGPVLTLRIGSRPTVFIADSSIAHKILVQNGALFADRPPALSVSKVLTSNQHNISSASYGPLWRLLRRNLTSQILHPSRVRSYSEARKWVLDILLNRLQSQSESGNPVSVVENFQYAMFCLLVLMCFGDKLEESQIREVENVERQLILCFQRFNTLNFWPKVTKILFRKRWEALFKLRKNQEKVLTRLINARRKANENRAQNEEEEIVVSYVDTLLELELPDEKRKLNDDELVTLCSEFLNAGTDTTSTALQWIMANLVKYPEIQNKLFVEMEGVMGNGSREEVKEEVLGKLPYLKAVVLEGLRKHPPAHFVLPHAVKEDTELGNYVIPKNAAVNFMVAEMGRNPKVWEDPTAFNPERFMKGGKEKEEQVAEFDITGSKEIKMMPFGAGRRICPGFGLAILHLEYFVANLLWRFEWKVVDGDEVDMSEKVELTVAMKNPLKAKIHPRIHTES* 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5277019 5278566 - Chy11G190730.1 Chy11g00493 236254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00493 515 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00493 515 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00493 515 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00493 515 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00493 515 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 508 - -
Chy11g00493 515 Coils Coil 241 268 - -
Chy11g00493 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Chy11g00493 515 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00493 515 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00493 515 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00493 515 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00493 515 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00493 515 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00493 515 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00493 515 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00493 515 PANTHER CYTOCHROME P450 4 508 - -
Chy11g00493 515 Pfam Cytochrome P450 31 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00493 515 Gene3D Cytochrome P450 24 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00493 515 SUPERFAMILY Cytochrome P450 31 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g01407 Chy-Chr9:15761931 Chy11g00493 Chy-Chr11:5277019 0 dispersed
Chy11g00490 Chy-Chr11:5250885 Chy11g00493 Chy-Chr11:5277019 0 dispersed
Chy11g00491 Chy-Chr11:5260700 Chy11g00493 Chy-Chr11:5277019 0 dispersed
Chy11g00493 Chy-Chr11:5277019 Chy11g00520 Chy-Chr11:5709163 1.36E-148 dispersed
Chy11g00492 Chy-Chr11:5267456 Chy11g00493 Chy-Chr11:5277019 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00493 K24184 - csv:101220777 979.548