Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g00510 | ATGGACACTCTCTTTGTCCCTATTACCTTCTCCGAACTTCCTCACCCTTTACTCACCTGCAACACCAACGCCTCCTCTCAATCGAGGGTTGGATCTGTTTCTCGCTTCTCGCCGCTTTCTTCTCTAATTGACCTCAATCGCTTTCCCATTCGCTTTAAGAAGCTTTCCTATCCTCGCTTCGGTCACTTCCGTTGCGCCGCCGAGGCCTCCGATCACCGACACGGTCACCATCACGGCCATCATCACCACCACCATGGCTGCCAGCACCATTGCAGTGGTGACAGTGATGGGGTGGAGCTGACTGGGGCTCAGAAGGCGTTCGTTCGATTTGCCGAAGCTATTAGATGGACGGACTTGGCGAATTATTTGAGGGAGCATCTGCATATGTGTTGCGGTTCTGCTGCTTTGTTTGTGACTGCGGCTGCTTTTCCTTATTTGGTGCCTAAACCCGCTGTGAAGCCTTTACAGAATGTTTTCATTGCTGTTGCTTTCCCATTAGTCGGGGTCTCTGCTTCTCTTGATGCTCTTACTGATATTAGTGGTGGAAAAGTAAACATCCATGTACTAATGGCTCTTGCAGCCTTTGCATCAATATTTATGGGGAACCCCTTGGAAGGAGGACTACTTCTTGTGATGTTTAATATGGCTCATATCGCTGAAGAGTATTTCACAAAGCAATCAATGATTGATGTTAAAGAGTTGAAGGAAAGTCATCCAGATTTTGCTCTTGTTCTTGATGTGAATGATGATAACCTTCCCGATACTTCAGATCTGGAGCATAGAAGGGTGCCAGTGCGTGATGTTGAAGTGGGCTCATATATCTTGGTGGGAGCTGGTGAGTCTGTCCCTGTAGATTGTGAAGTTTATCAAGGCTGTGCCACAATCACTGTCGAGCACTTGACAGGAGAAGTCAAACCATTGGAAATTAAGGTTGGGGAAAGAGTTCCAGGTGGAGCAAGAAACTTGGACGGTAGGATCATAGTGAAGGCTACAAAAACATGGGAAGAGTCAACACTTAGCAGGATTGTGCAGTTGACTGAAGAAGCACAACTTAATAAACCAAAGCTACAGAGGTGGCTTGACGAATTTGGTGAGAATTACAGCAAGGTTGTTGTAGTTTTATCTGTAGCTGTTGCCCTCATTGGTCCATTATTGTTCAAGTGGCCATTTATATGCACACCAGGTTTCAGAGGATCAGTTTATAGAGCACTCGGGCTTATGGTAGCCGCATCACCATGTGCACTGGCAGCAGCGCCATTGGCATATGCTATTGCGATAAGCTCCTGCGCGAGAAAGGGGATACTCCTGAAAGGTGGACACGTGCTTGATGCTATGGCTTCTTGTCATACTGTTGCATTTGATAAAACCGGAACATTGACTACAGGAGGACTTGTGTTTAAAGCCATAGAACCTATTTATGGGCATAAGATTGGAGGCGATAAATCACAGTTTGCTTCCTGTTGCATACCAAGCTGCGAAAAAGAAGCCCTTGCAGTGGCAGCTGCCATGGAAAAGGGTACTACTCACCCAATTGGCAGAGCTGTAGTAGATCATAGTGTGGGGAAAGACCTTCCTTCTATTTCTGTTGAAAGTACCGAATATTTCCCTGGAAGAGGTCTCATAGCAACTCTGCATGGCATTAAGTCAGGAATTGGAGGTAAATTGCGGAAAGCATCTCTTGGTTCTGTAGATTTCATCACTTCCTTCTGCAAATCCGAAAATGAATCAAGGATGATCAAGGACGCTGTTAGAGCATCAACATATGGAAGTGAATTTGTTCATGCTGCTCTTTCAGTTGATCAAAAGGTAACACTGATTCACCTTGAGGATCAACCTCGACCTGGAGTCGTAGATGCAATCGCAGAACTACAACATCTGGGAAAACTTCGAGTTATGATGTTAACAGGTGATCATGATTCAAGTGCATGGAAAGTTGCAAATGCTGTGGGCATAAATGAAGTTTACTACAGTCTTAAGCCAGAGGACAAACTTGCTCACGTGAAGGAAATTTCAAGGGAAATGGGGGGTGGCTTGATCATGGTAGGCGAAGGGATAAACGATGCACCTGCACTTGCTGCTGCTACTGTGGGAATAGTTCTTGCTCATCGCGCAAGTGCCACTGCTACAGCTGTCGCAGATGTCCTACTTCTTCAGGACAGTATTTCTGGTGTACCTTTCTGCATTGCAAAATCTCGTCAGACCACTTCACTGATCAAGCAAAACGTGACCCTTGCCTTGACATCTATCCTTCTAGCGTCTCTCCCTTCCGTTTTGGGGTTTCTTCCATTGTGGCTAACGGTCCTTCTACACGAGGGTGGCACTCTCCTTGTTTGCCTGAACTCAGTACGTGCTCTAAATCACCCCTCATGGTCATGGAAACAAGATTTTGAAAACCTGATACACGATGCCAGATCTAAACTTAACACAACACCCGAAACTAGATCTGGGACCATCCAAACTGCAACTTCATAG | 2472 | 45.91 | MDTLFVPITFSELPHPLLTCNTNASSQSRVGSVSRFSPLSSLIDLNRFPIRFKKLSYPRFGHFRCAAEASDHRHGHHHGHHHHHHGCQHHCSGDSDGVELTGAQKAFVRFAEAIRWTDLANYLREHLHMCCGSAALFVTAAAFPYLVPKPAVKPLQNVFIAVAFPLVGVSASLDALTDISGGKVNIHVLMALAAFASIFMGNPLEGGLLLVMFNMAHIAEEYFTKQSMIDVKELKESHPDFALVLDVNDDNLPDTSDLEHRRVPVRDVEVGSYILVGAGESVPVDCEVYQGCATITVEHLTGEVKPLEIKVGERVPGGARNLDGRIIVKATKTWEESTLSRIVQLTEEAQLNKPKLQRWLDEFGENYSKVVVVLSVAVALIGPLLFKWPFICTPGFRGSVYRALGLMVAASPCALAAAPLAYAIAISSCARKGILLKGGHVLDAMASCHTVAFDKTGTLTTGGLVFKAIEPIYGHKIGGDKSQFASCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSVGKDLPSISVESTEYFPGRGLIATLHGIKSGIGGKLRKASLGSVDFITSFCKSENESRMIKDAVRASTYGSEFVHAALSVDQKVTLIHLEDQPRPGVVDAIAELQHLGKLRVMMLTGDHDSSAWKVANAVGINEVYYSLKPEDKLAHVKEISREMGGGLIMVGEGINDAPALAAATVGIVLAHRASATATAVADVLLLQDSISGVPFCIAKSRQTTSLIKQNVTLALTSILLASLPSVLGFLPLWLTVLLHEGGTLLVCLNSVRALNHPSWSWKQDFENLIHDARSKLNTTPETRSGTIQTATS* | 824 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 5556956 | 5567009 | + | Chy11G190900.1 | Chy11g00510 | 236271 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g00510 | 823 | PRINTS | P-type cation-transporting ATPase superfamily signature | 627 | 637 | - | - | |
Chy11g00510 | 823 | PRINTS | P-type cation-transporting ATPase superfamily signature | 681 | 700 | - | - | |
Chy11g00510 | 823 | PRINTS | P-type cation-transporting ATPase superfamily signature | 705 | 717 | - | - | |
Chy11g00510 | 823 | PRINTS | P-type cation-transporting ATPase superfamily signature | 604 | 615 | - | - | |
Chy11g00510 | 823 | PRINTS | P-type cation-transporting ATPase superfamily signature | 452 | 466 | - | - | |
Chy11g00510 | 823 | PANTHER | PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 | 55 | 810 | - | - | |
Chy11g00510 | 823 | TIGRFAM | ATPase-IB_hvy: heavy metal translocating P-type ATPase | 186 | 783 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Chy11g00510 | 823 | Pfam | E1-E2 ATPase | 259 | 432 | - | - | |
Chy11g00510 | 823 | Gene3D | - | 225 | 350 | - | - | |
Chy11g00510 | 823 | Gene3D | - | 445 | 732 | IPR023214 | - | |
Chy11g00510 | 823 | SUPERFAMILY | Calcium ATPase, transduction domain A | 260 | 345 | IPR008250 | - | |
Chy11g00510 | 823 | SFLD | p-type atpase | 434 | 734 | IPR044492 | - | |
Chy11g00510 | 823 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 493 | 589 | IPR023299 | GO:0000166 | |
Chy11g00510 | 823 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 586 | 761 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Chy11g00510 | 823 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 261 | 473 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Chy11g00510 | 823 | Pfam | haloacid dehalogenase-like hydrolase | 450 | 694 | - | - | |
Chy11g00510 | 823 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 454 | 460 | IPR018303 | - | |
Chy11g00510 | 823 | Gene3D | - | 463 | 612 | IPR023299 | GO:0000166 | |
Chy11g00510 | 823 | SFLD | C1.7: P-type atpase like | 434 | 734 | - | - | |
Chy11g00510 | 823 | SUPERFAMILY | HAD-like | 450 | 781 | IPR036412 | - | |
Chy11g00510 | 823 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 188 | 765 | IPR023298 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy11g00510 | Chy-Chr11:5556956 | Chy11g00558 | Chy-Chr11:6278501 | 0 | dispersed | |
Chy11g00510 | Chy-Chr11:5556956 | Chy02g02243 | Chy-Chr2:26524277 | 7.35E-60 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g00510 | K01534 | - | csv:101221102 | 1520.37 |