Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00510 ATGGACACTCTCTTTGTCCCTATTACCTTCTCCGAACTTCCTCACCCTTTACTCACCTGCAACACCAACGCCTCCTCTCAATCGAGGGTTGGATCTGTTTCTCGCTTCTCGCCGCTTTCTTCTCTAATTGACCTCAATCGCTTTCCCATTCGCTTTAAGAAGCTTTCCTATCCTCGCTTCGGTCACTTCCGTTGCGCCGCCGAGGCCTCCGATCACCGACACGGTCACCATCACGGCCATCATCACCACCACCATGGCTGCCAGCACCATTGCAGTGGTGACAGTGATGGGGTGGAGCTGACTGGGGCTCAGAAGGCGTTCGTTCGATTTGCCGAAGCTATTAGATGGACGGACTTGGCGAATTATTTGAGGGAGCATCTGCATATGTGTTGCGGTTCTGCTGCTTTGTTTGTGACTGCGGCTGCTTTTCCTTATTTGGTGCCTAAACCCGCTGTGAAGCCTTTACAGAATGTTTTCATTGCTGTTGCTTTCCCATTAGTCGGGGTCTCTGCTTCTCTTGATGCTCTTACTGATATTAGTGGTGGAAAAGTAAACATCCATGTACTAATGGCTCTTGCAGCCTTTGCATCAATATTTATGGGGAACCCCTTGGAAGGAGGACTACTTCTTGTGATGTTTAATATGGCTCATATCGCTGAAGAGTATTTCACAAAGCAATCAATGATTGATGTTAAAGAGTTGAAGGAAAGTCATCCAGATTTTGCTCTTGTTCTTGATGTGAATGATGATAACCTTCCCGATACTTCAGATCTGGAGCATAGAAGGGTGCCAGTGCGTGATGTTGAAGTGGGCTCATATATCTTGGTGGGAGCTGGTGAGTCTGTCCCTGTAGATTGTGAAGTTTATCAAGGCTGTGCCACAATCACTGTCGAGCACTTGACAGGAGAAGTCAAACCATTGGAAATTAAGGTTGGGGAAAGAGTTCCAGGTGGAGCAAGAAACTTGGACGGTAGGATCATAGTGAAGGCTACAAAAACATGGGAAGAGTCAACACTTAGCAGGATTGTGCAGTTGACTGAAGAAGCACAACTTAATAAACCAAAGCTACAGAGGTGGCTTGACGAATTTGGTGAGAATTACAGCAAGGTTGTTGTAGTTTTATCTGTAGCTGTTGCCCTCATTGGTCCATTATTGTTCAAGTGGCCATTTATATGCACACCAGGTTTCAGAGGATCAGTTTATAGAGCACTCGGGCTTATGGTAGCCGCATCACCATGTGCACTGGCAGCAGCGCCATTGGCATATGCTATTGCGATAAGCTCCTGCGCGAGAAAGGGGATACTCCTGAAAGGTGGACACGTGCTTGATGCTATGGCTTCTTGTCATACTGTTGCATTTGATAAAACCGGAACATTGACTACAGGAGGACTTGTGTTTAAAGCCATAGAACCTATTTATGGGCATAAGATTGGAGGCGATAAATCACAGTTTGCTTCCTGTTGCATACCAAGCTGCGAAAAAGAAGCCCTTGCAGTGGCAGCTGCCATGGAAAAGGGTACTACTCACCCAATTGGCAGAGCTGTAGTAGATCATAGTGTGGGGAAAGACCTTCCTTCTATTTCTGTTGAAAGTACCGAATATTTCCCTGGAAGAGGTCTCATAGCAACTCTGCATGGCATTAAGTCAGGAATTGGAGGTAAATTGCGGAAAGCATCTCTTGGTTCTGTAGATTTCATCACTTCCTTCTGCAAATCCGAAAATGAATCAAGGATGATCAAGGACGCTGTTAGAGCATCAACATATGGAAGTGAATTTGTTCATGCTGCTCTTTCAGTTGATCAAAAGGTAACACTGATTCACCTTGAGGATCAACCTCGACCTGGAGTCGTAGATGCAATCGCAGAACTACAACATCTGGGAAAACTTCGAGTTATGATGTTAACAGGTGATCATGATTCAAGTGCATGGAAAGTTGCAAATGCTGTGGGCATAAATGAAGTTTACTACAGTCTTAAGCCAGAGGACAAACTTGCTCACGTGAAGGAAATTTCAAGGGAAATGGGGGGTGGCTTGATCATGGTAGGCGAAGGGATAAACGATGCACCTGCACTTGCTGCTGCTACTGTGGGAATAGTTCTTGCTCATCGCGCAAGTGCCACTGCTACAGCTGTCGCAGATGTCCTACTTCTTCAGGACAGTATTTCTGGTGTACCTTTCTGCATTGCAAAATCTCGTCAGACCACTTCACTGATCAAGCAAAACGTGACCCTTGCCTTGACATCTATCCTTCTAGCGTCTCTCCCTTCCGTTTTGGGGTTTCTTCCATTGTGGCTAACGGTCCTTCTACACGAGGGTGGCACTCTCCTTGTTTGCCTGAACTCAGTACGTGCTCTAAATCACCCCTCATGGTCATGGAAACAAGATTTTGAAAACCTGATACACGATGCCAGATCTAAACTTAACACAACACCCGAAACTAGATCTGGGACCATCCAAACTGCAACTTCATAG 2472 45.91 MDTLFVPITFSELPHPLLTCNTNASSQSRVGSVSRFSPLSSLIDLNRFPIRFKKLSYPRFGHFRCAAEASDHRHGHHHGHHHHHHGCQHHCSGDSDGVELTGAQKAFVRFAEAIRWTDLANYLREHLHMCCGSAALFVTAAAFPYLVPKPAVKPLQNVFIAVAFPLVGVSASLDALTDISGGKVNIHVLMALAAFASIFMGNPLEGGLLLVMFNMAHIAEEYFTKQSMIDVKELKESHPDFALVLDVNDDNLPDTSDLEHRRVPVRDVEVGSYILVGAGESVPVDCEVYQGCATITVEHLTGEVKPLEIKVGERVPGGARNLDGRIIVKATKTWEESTLSRIVQLTEEAQLNKPKLQRWLDEFGENYSKVVVVLSVAVALIGPLLFKWPFICTPGFRGSVYRALGLMVAASPCALAAAPLAYAIAISSCARKGILLKGGHVLDAMASCHTVAFDKTGTLTTGGLVFKAIEPIYGHKIGGDKSQFASCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSVGKDLPSISVESTEYFPGRGLIATLHGIKSGIGGKLRKASLGSVDFITSFCKSENESRMIKDAVRASTYGSEFVHAALSVDQKVTLIHLEDQPRPGVVDAIAELQHLGKLRVMMLTGDHDSSAWKVANAVGINEVYYSLKPEDKLAHVKEISREMGGGLIMVGEGINDAPALAAATVGIVLAHRASATATAVADVLLLQDSISGVPFCIAKSRQTTSLIKQNVTLALTSILLASLPSVLGFLPLWLTVLLHEGGTLLVCLNSVRALNHPSWSWKQDFENLIHDARSKLNTTPETRSGTIQTATS* 824
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5556956 5567009 + Chy11G190900.1 Chy11g00510 236271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00510 823 PRINTS P-type cation-transporting ATPase superfamily signature 627 637 - -
Chy11g00510 823 PRINTS P-type cation-transporting ATPase superfamily signature 681 700 - -
Chy11g00510 823 PRINTS P-type cation-transporting ATPase superfamily signature 705 717 - -
Chy11g00510 823 PRINTS P-type cation-transporting ATPase superfamily signature 604 615 - -
Chy11g00510 823 PRINTS P-type cation-transporting ATPase superfamily signature 452 466 - -
Chy11g00510 823 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 55 810 - -
Chy11g00510 823 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 186 783 IPR027256 GO:0006812|GO:0016021|GO:0019829
Chy11g00510 823 Pfam E1-E2 ATPase 259 432 - -
Chy11g00510 823 Gene3D - 225 350 - -
Chy11g00510 823 Gene3D - 445 732 IPR023214 -
Chy11g00510 823 SUPERFAMILY Calcium ATPase, transduction domain A 260 345 IPR008250 -
Chy11g00510 823 SFLD p-type atpase 434 734 IPR044492 -
Chy11g00510 823 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 493 589 IPR023299 GO:0000166
Chy11g00510 823 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 586 761 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy11g00510 823 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 261 473 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy11g00510 823 Pfam haloacid dehalogenase-like hydrolase 450 694 - -
Chy11g00510 823 ProSitePatterns E1-E2 ATPases phosphorylation site. 454 460 IPR018303 -
Chy11g00510 823 Gene3D - 463 612 IPR023299 GO:0000166
Chy11g00510 823 SFLD C1.7: P-type atpase like 434 734 - -
Chy11g00510 823 SUPERFAMILY HAD-like 450 781 IPR036412 -
Chy11g00510 823 SUPERFAMILY Calcium ATPase, transmembrane domain M 188 765 IPR023298 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g00510 Chy-Chr11:5556956 Chy11g00558 Chy-Chr11:6278501 0 dispersed
Chy11g00510 Chy-Chr11:5556956 Chy02g02243 Chy-Chr2:26524277 7.35E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00510 K01534 - csv:101221102 1520.37