Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00511 ATGATATCCCTAGCCCCTATCTGCGACCCCCAGCAACCCAATAATGTCTCCTCCTCTCCCCCGCCCTCCACTCCGGCCACCCATGTTTTCCGATCCAAATTACCCGACATTCCTATCCCCGACCATCTCCCTCTTCACAGTTACTCCTTCCACAAACTCTCCCAAGTTTCCGACCGCCCATGTTTGATCGTCGGCTCCACCGGAAAATCCTATTCCTACTCCGAAACCCACCGCTTTTCCCGCAAAGCCGCCGCCACTTTCTCTAAACTTGGTGCTAAGAGAGGGGATGTTATTATGATTCTCCTCCATAATTCTCCTGAATTTATTTTCTCTTTTATGGGTTCCTCCATGCTCGGCGCCGTCGCTACCACCGCCAATCCTTACTACACGGGGGCTGAGATTTCTAGGCAGCTGAAGGCCTCCGGTGCTAAGTTCGTTGTTACTTACTCCCGATGCGTTGATAAGTTACGAGAATCATGTGGTGAAGTTCTCACTATAGTCACCATCGATGACCCGCCGGAGAATTGTCTGAGCTTCTCGATGGTTTACGACGCCGATGAGAACGATGTTCCGTTTGTGGAGATTGATACGAACGATGCCGTTGCTCTGCCGTTCTCCTCCGGGACGACCGGCCTCCCCAAGGGTGTGATTTTGACTCATAAGAACATGGTGTCGAGTGTGGCTCAACAGGTGGATGGAGAAAATCCGAACCTATATTTGAAAAGAAACGACGTAGTTTTATGCGTGTTACCAATGTTTCATATATTCTCATTGAGTAGCATAGTTTTGATATCGATGAGATCAGGGGCAGCGTTGCTTTTGATGGAGAAATTCGAGATCGAGTCATTGCTACGACTAGTAGAGAGACACAAGGTGACGGTGGCAACGGTGGTGCCACCGCTCGTGGTGTCGCTAGTGAAGAACCCGAAGGTTGCAGATTTTGACTTGAGCTCGATTCGATTAGTGCTTTCCGGAGCCGCACCGTTGCGAAAGGAGCTGGAGGAGGCTCTCATGGAAAGGCTTCCTCAAGCCATTTTTGGTCAGGGCTATGGTATGACGGAAGCGGGTCCCGTGCTTAGCATGTGCTCGGCTTTTGCAAAGGAGCCACCGTTGCCAACAAAATCTGGCTCCTGCGGCCGCGTTGTTAGAAACTCGGAGCTTAAAGTCGTTGATCCAATAACTGGTGCCTCACTCACTTATAATCAACCCGGAGAGATTTGTGTTCGAGGTCCCCAAATTATGAAAGGTTATTTGAATGACACGGTGTCCACGTCATTGACTGTCGACGTGGAGGGTTGGCTTCATACGGGTGACATTGGTTACGTTGACGACGAAGAAGAAATTTTTATAGTTGATAGACTCAAAGAGATTATTAAATTTAAAGGTTTCCAGGTGGCACCAGCAGAGTTAGAGGCCCTTCTCGTGACCCATACATCTATTGTTGATGCGGCTGTTGTCCCGCAAAACGACGATGTTGCTGGTGAAGTTCCCGTAGCTTTCATAGTTCCATCAACTCATAATGAACTTGCTGAGGAATCAGTAAAAGAATTCATAGCAAAGCAGGTTGTGTTCTACAAGAGATTGCACAAAGTATATTTTGTGAAAACAATTCCAAAATCACCCTCTGGAAAGATCTTGAGAAAGGAACTCAAAGCCAAACTCTCAATCTCATAG 1674 48.03 MISLAPICDPQQPNNVSSSPPPSTPATHVFRSKLPDIPIPDHLPLHSYSFHKLSQVSDRPCLIVGSTGKSYSYSETHRFSRKAAATFSKLGAKRGDVIMILLHNSPEFIFSFMGSSMLGAVATTANPYYTGAEISRQLKASGAKFVVTYSRCVDKLRESCGEVLTIVTIDDPPENCLSFSMVYDADENDVPFVEIDTNDAVALPFSSGTTGLPKGVILTHKNMVSSVAQQVDGENPNLYLKRNDVVLCVLPMFHIFSLSSIVLISMRSGAALLLMEKFEIESLLRLVERHKVTVATVVPPLVVSLVKNPKVADFDLSSIRLVLSGAAPLRKELEEALMERLPQAIFGQGYGMTEAGPVLSMCSAFAKEPPLPTKSGSCGRVVRNSELKVVDPITGASLTYNQPGEICVRGPQIMKGYLNDTVSTSLTVDVEGWLHTGDIGYVDDEEEIFIVDRLKEIIKFKGFQVAPAELEALLVTHTSIVDAAVVPQNDDVAGEVPVAFIVPSTHNELAEESVKEFIAKQVVFYKRLHKVYFVKTIPKSPSGKILRKELKAKLSIS* 558
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5586858 5592103 + Chy11G190910.1 Chy11g00511 236272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00511 557 Gene3D - 23 454 IPR042099 -
Chy11g00511 557 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 28 553 - -
Chy11g00511 557 MobiDBLite consensus disorder prediction 1 26 - -
Chy11g00511 557 ProSitePatterns Putative AMP-binding domain signature. 203 214 IPR020845 -
Chy11g00511 557 SUPERFAMILY Acetyl-CoA synthetase-like 31 553 - -
Chy11g00511 557 Pfam AMP-binding enzyme 55 460 IPR000873 -
Chy11g00511 557 PANTHER 4-COUMARATE--COA LIGASE 3 28 553 - -
Chy11g00511 557 CDD 4CL 39 550 - -
Chy11g00511 557 Pfam AMP-binding enzyme C-terminal domain 469 544 IPR025110 -
Chy11g00511 557 Gene3D - 455 555 IPR045851 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g00511 Chy-Chr11:5586858 Chy04g02042 Chy-Chr4:26006671 1.24E-133 dispersed
Chy11g00511 Chy-Chr11:5586858 Chy05g00951 Chy-Chr5:14103681 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00511 K01904 - csv:101221344 1017.3