Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g00548 | ATGGCGGTGGAGCTCCTCTCCGGCTTCACCAACGCTCCTCAACTCTCCTCCCGATCCCCTATGGACCAAGACTCCGCCGTTCAAGAAGCCGCCTCCGGTCTCGATACCCTCAAAAAGCTCATCACATTACTCTCTCATTCTCCCCCTTCTAATCTCGACTCCGATTGCCAAGCCGTCGCCAACGCCGCCGTCTCCCACTTCCGCAAGGCCATATCTCTCCTCGGCCGCTCCTCTAGAACCGGCCATGCCCGATTCCGCCGTGCCCCTTTAGATTCCTCTAAAATCTATAACGCTACCCCCATTCAACAAATCCCTCCCCCCTCCCTTGACCGCCTCGATTCCGCCACCACCATCAATTTCTCTTACTCTGCCGCTCCTACTTCCTCCTTCTTAACCTCCCTTCCTGCTTCCGATTCAGAAATTAAGCTCCAGCATCAACCCTCTTCCTCTTCTTTTCAGATTACTGATCTTTCCAGAGTTTCCTCTGTTGTCTCTAAGCCTTCTTCTGGTCTCAAGAGAAAGTGCGGTTCTGAGAATTTGGGTTCTGGGAAATGCGCTGGATCTTCTGGTGGTCGCTGCCACTGCTCTAAGAAAAGAAAATTGAGGTTGAAAAGGGTGGTGAGAGTACCAGCAATAAGTTCAAAGAACGCTGATATTCCTCCAGATGATTATTCGTGGAGGAAGTACGGGCAAAAGCCGATTAAGGGTTCTCCATATCCAAGAGGTTACTATAAGTGTAGCAGTTTACGAGGATGTCCGGCAAGAAAACACGTTGAGAGAGCGTCAGATGATCCATCTATGTTAATAGTAACGTACGAAGGCGATCATAATCACTCTCAATCAGTGGCAGAAGCTTCAAGTCTTATCCTTGAATCTTGGTGA | 882 | 49.77 | MAVELLSGFTNAPQLSSRSPMDQDSAVQEAASGLDTLKKLITLLSHSPPSNLDSDCQAVANAAVSHFRKAISLLGRSSRTGHARFRRAPLDSSKIYNATPIQQIPPPSLDRLDSATTINFSYSAAPTSSFLTSLPASDSEIKLQHQPSSSSFQITDLSRVSSVVSKPSSGLKRKCGSENLGSGKCAGSSGGRCHCSKKRKLRLKRVVRVPAISSKNADIPPDDYSWRKYGQKPIKGSPYPRGYYKCSSLRGCPARKHVERASDDPSMLIVTYEGDHNHSQSVAEASSLILESW* | 294 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6055556 | 6056884 | - | Chy11G191280.1 | Chy11g00548 | 236309 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g00548 | 293 | Pfam | WRKY DNA -binding domain | 222 | 278 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy11g00548 | 293 | ProSiteProfiles | WRKY domain profile. | 215 | 281 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy11g00548 | 293 | SUPERFAMILY | WRKY DNA-binding domain | 216 | 280 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy11g00548 | 293 | SMART | WRKY_cls | 220 | 280 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy11g00548 | 293 | Pfam | Plant zinc cluster domain | 172 | 218 | IPR018872 | - | |
Chy11g00548 | 293 | MobiDBLite | consensus disorder prediction | 9 | 29 | - | - | |
Chy11g00548 | 293 | PANTHER | WRKY TRANSCRIPTION FACTOR 7-RELATED | 20 | 292 | - | - | |
Chy11g00548 | 293 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 20 | 292 | IPR044810 | GO:0003700 | |
Chy11g00548 | 293 | Gene3D | WRKY domain | 206 | 281 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy11g00548 | 293 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g02263 | Chy-Chr2:26712048 | Chy11g00548 | Chy-Chr11:6055556 | 3.05E-63 | dispersed | |
Chy04g00294 | Chy-Chr4:2650264 | Chy11g00548 | Chy-Chr11:6055556 | 4.22E-71 | dispersed | |
Chy05g00406 | Chy-Chr5:4332849 | Chy11g00548 | Chy-Chr11:6055556 | 1.41E-51 | dispersed | |
Chy07g00148 | Chy-Chr7:1276049 | Chy11g00548 | Chy-Chr11:6055556 | 5.25E-15 | dispersed | |
Chy10g00301 | Chy-Chr10:7622199 | Chy11g00548 | Chy-Chr11:6055556 | 1.40E-21 | dispersed | |
Chy11g00548 | Chy-Chr11:6055556 | Chy12g00450 | Chy-Chr12:5585747 | 1.62E-29 | dispersed | |
Chy11g00548 | Chy-Chr11:6055556 | Chy02g00896 | Chy-Chr2:5782349 | 8.62E-109 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18688 | PF03106 | WRKY | 2.60E-26 | CL0274 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g00548 | - | - | csv:101209733 | 565.459 |