Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00555 ATGACCTCCATTTTTGCTTTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCATTCTTCTTGCAATGGACTCAATTTTGATGGGGTTCTCTTACTTTCATTTAAATATGCTGTTTTGGATGATCCGCTGTTTGTTCTTCAGAATTGGAATTACTCCGATGAAACTCCGTGTTTATGGCGAGGAGTTCAATGTTCCGACGGTGGTTCTAGAGTTACAGGTTTGTCCCTTCCCAATTCTCAGCTAATGGGATCTGTTTCTTCTGATCTGGGTTTGATTCAAAATCTTCAAACGGTTGATCTTTCCAATAATTCCTTCAATGGGTCTCTCCCTCAGTCTCTGTTCAATGCCACCATGCTCCGGTTTCTTGATTTGTCGGATAATGTAATTTCCGGTGAGGTTCCTGCGCCGGTGGGTAGCCTTGCGAATCTTCAAGTTCTTAACCTTTCCGGCAATGCTCTGTTCGGGAAGTTTCCGAGTGATTTCGTGAATTTGGGGAATCTCACGGTTGTGTCTATGAAGAACAATTACATTTCCGGTGAAATTCCCGGTGGGTTTAAGACAGTGGAGGTTTTGGATCTGTCTTCCAATTTGATTAATGGGTCTTTGCCGGCTGATTTTGGTGGCGATAGTTTACATTACTTCAACATCTCATACAACAAACTTACCGGCCAAATTCCGCTGGATTTCGCCCATAAAATTCCGGCTAACGCCATAATTGATCTCTCCTTCAACAATCTCACCGGTGAAGTCCCTGTTTCTGACGTGTTCATGAATCAAGAAGCAAACTCCTTCACCGGAAACCGTCAACTCTGCGGTGAGTTAACGAAAACCCCATGCCCAATTACTTCATCGCCGTCGTCTCTCCCGCCGGCAATCGCCGCCATTCCGTTAGACCCAAGTACTCCAGAAACAACCTCGCCGGAAAAACAGAACGAAACAGGGTTTAAGCCTTCAACAATCGTTGCCATTGTTTTAGGAGACATCGTCGGATTAGCAATTCTCTGCCTCCTGTTCTTCTACGTCTTCCATTTGAAGAAGAAAAACAAAGCCGTCGAAACCCATTTGAAAAATGAAGCCAATTTAGCGAAAGACAGTTGGTCCACATCCTCATCGGAATCCAGAGGATTTTCCCGATGGTCCTGTTTGAGAAAAACAGGGGATCCAGAAGAGGCAAACTCCGACCAAGAGAGTGTCCTATCATTCTCCGGCCACCATGATACGGCGGAAGAAGCAGGAGAAGCCAACAAAAGAGGAACATTAGTAACAGTTGACGGTGGAGAGAAGGAGCTCGAGCTCGATACTCTCCTAAAAGCATCAGCGTACATTCTCGGCGCCACCGGATCGAGCATTACATACAAGGCGGTGCTCGAAGACGGGACGGCGTTTGCCGTGAGAAGAATCGGAGACGGCGGAGTGGAAAAATATAAAGATTTCGAGAATCAGATTCGTGGTGTGGCTAAATTAGTTCATCCAAATTTGGTTCGAGTTCGTGGATTTTATTGGGGTGTTGATGAAAAGCTCATTATTTATGATTTTGTTCCGAATGGTAGCCTTGCAAATGCTCGTTACAGGAAAGTGGGCTCTTCGCCTTGTCATCTTCCATGGGAGGCCCGATTGAGGATTGCAAAAGGAGTGGCCCGTGGCCTTTCTTATCTCCACGACAAGAAGCATGTCCATGGCAACTTAAGGCCCACCAACATTCTTTTGGGCTTCGATATGGAGCCTAAGATAGGCGATTTCGGTCTCGACAAGCTCTTTTTAGGCGATTCCTGCTATAAACCAGGTGGCTCCACTCGAATTTTTGGAAGTAAACGGTCTACTGCTTCTCGAGATAGCTTCCAAGACTATGTCACTGGACCAAGTCCTGGACCTAGCCCGAGCTCGATCAGTGGGGTGTCACCATACTTGGCACCAGAGTCACTTCGAAGCCTGAAGCCCAATTCGAAATGGGATGTGTATTCATTTGGTGTGATATTGCTTGAACTACTAACAGGAAAGATCATAGTGTTGGATGAGTTAGGGCAAGGGCTTGGTCTTGCTATGGAAGACAAGAGTCGAACCCTAAGAATGGCTGACATGGCGATTAGAGCAGATGTGGAGGGAAGAGAAGAAGCATTGTTATCTTGCTTTAAATTAGGATATAGTTGTGCATCTCCTGCCCCACAAAAGAGACCATCCATGAAAGAAGCATTGCAAGTTTTGGAGAAATTTCCAACCCTATCGGTGTCATCACACTATTATGGTCTCTAG 2247 45.62 MTSIFAFLLLLLLLLLHSSCNGLNFDGVLLLSFKYAVLDDPLFVLQNWNYSDETPCLWRGVQCSDGGSRVTGLSLPNSQLMGSVSSDLGLIQNLQTVDLSNNSFNGSLPQSLFNATMLRFLDLSDNVISGEVPAPVGSLANLQVLNLSGNALFGKFPSDFVNLGNLTVVSMKNNYISGEIPGGFKTVEVLDLSSNLINGSLPADFGGDSLHYFNISYNKLTGQIPLDFAHKIPANAIIDLSFNNLTGEVPVSDVFMNQEANSFTGNRQLCGELTKTPCPITSSPSSLPPAIAAIPLDPSTPETTSPEKQNETGFKPSTIVAIVLGDIVGLAILCLLFFYVFHLKKKNKAVETHLKNEANLAKDSWSTSSSESRGFSRWSCLRKTGDPEEANSDQESVLSFSGHHDTAEEAGEANKRGTLVTVDGGEKELELDTLLKASAYILGATGSSITYKAVLEDGTAFAVRRIGDGGVEKYKDFENQIRGVAKLVHPNLVRVRGFYWGVDEKLIIYDFVPNGSLANARYRKVGSSPCHLPWEARLRIAKGVARGLSYLHDKKHVHGNLRPTNILLGFDMEPKIGDFGLDKLFLGDSCYKPGGSTRIFGSKRSTASRDSFQDYVTGPSPGPSPSSISGVSPYLAPESLRSLKPNSKWDVYSFGVILLELLTGKIIVLDELGQGLGLAMEDKSRTLRMADMAIRADVEGREEALLSCFKLGYSCASPAPQKRPSMKEALQVLEKFPTLSVSSHYYGL* 749
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6176636 6179308 - Chy11G191350.1 Chy11g00555 236316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00555 748 MobiDBLite consensus disorder prediction 384 416 - -
Chy11g00555 748 Gene3D Ribonuclease Inhibitor 24 185 IPR032675 -
Chy11g00555 748 Gene3D Ribonuclease Inhibitor 186 280 IPR032675 -
Chy11g00555 748 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Chy11g00555 748 Pfam Leucine Rich repeats (2 copies) 116 156 IPR025875 -
Chy11g00555 748 Gene3D Transferase(Phosphotransferase) domain 1 512 743 - -
Chy11g00555 748 PANTHER BNAC07G16060D PROTEIN 10 738 - -
Chy11g00555 748 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 738 - -
Chy11g00555 748 ProSiteProfiles Protein kinase domain profile. 436 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g00555 748 SUPERFAMILY Protein kinase-like (PK-like) 441 734 IPR011009 -
Chy11g00555 748 SUPERFAMILY L domain-like 30 271 - -
Chy11g00555 748 Gene3D Phosphorylase Kinase; domain 1 406 511 - -
Chy11g00555 748 Pfam Protein kinase domain 442 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01055 Chy-Chr6:8493204 Chy11g00555 Chy-Chr11:6176636 0 dispersed
Chy09g00887 Chy-Chr9:11643862 Chy11g00555 Chy-Chr11:6176636 1.15E-138 dispersed
Chy11g00555 Chy-Chr11:6176636 Chy04g02286 Chy-Chr4:27406963 5.82E-27 dispersed
Chy11g00555 Chy-Chr11:6176636 Chy10g01174 Chy-Chr10:16557729 6.55E-146 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71540 PF00069 Pkinase 1.80E-28 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00555 - - csv:101210227 1385.93