Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g00558 | ATGGGAACTCTCTCCTTCCCAATTCCCTCCTCAAAATTCCATCTTTTATCGAATCCCAACCCAGTTTCTCTTTTTACGCACCCTTTTCTTCAATCATCTTTCTCATCTTCTCCATTTCCCCCTCGTAATTTCCCTATTCTTCATTTACGGCGGCGTGTTCTCTGTTCCGCTGCGGCAGCTGGTCGGTCGAATCACGATGACGACCACCATGTTCATGATCACAACCATGGTCACCACCACCACCACCACCATGGTCACCACCACTGTGATCATGATGTTGAATTGTCTGGGCCTCAGAAAGCGGTGATTGAATTTGCTAAAGCCACTAGGTGGACGGACTTGGCTAACTATTTGAGGGAAAGCTTGCAATTATGTTGCTGCTCTATGGCTTTGTTTGTGGCTGCTGCTGTTTGCCCTTATTTGGTGCCCAAGCCCATTGTGAAGCCTTTGCAAATTGCTTTCATTGTCATTGGTTTTCCTTTAGTTGGGGTCTCCTCGGCACTTGACGCTTTAACTGATATTATTGGTGGAAAAGTGAACATCCATGTACTTATGGCCCTTGCAGCCTTTGCTTCCATCTTTATGGGAAATTCCTTGGAAGGAGGACTACTACTTGCCATGTTTAACTTGTCTCACATTGCCGAAGAGTATTTTACAAGTCGTGCGATGATTGATGTCAAAGAGTTGAAGGAAAACTATCCAGACTTTGCCCTTGTTTTAGATACAAATGATGGTGAAGTTCCAAATATTACAGATTTGTCCTACCAAAAGGTGCCTGTCCAAGATGTAGAAGTGGACTCCTATATATTAGTTGGAGCTGGTGAGTTTGTGCCTGTAGATTGTGAAGTTTTCCAAGGTAGTGCTACAGTCACCATTGAGCACCTAACCGGTGAAATCAAACCATTAGAGATTTTGGTTGGAAGCAGAGTTCCTGGTGGTGCAAGAAACTTAGATGGTAGGATAATCGTGAAGGCAACAAAGACCTGGAAAGAGTCAACTCTGAGTCGTATAGTGAACTTGACTGAAGAGGCACAACTAAATAAACCAAGACTTCAGAGGTGGCTCGATGAATTTGGTGAACATTATAGCAAAGCAGTTGTAGTATTGGCCACTGCTATTGCCCTCGTTGGTCCAATATTATTCAAGTGGCCATTTATTGGTACTTCAGCTTGTAGAGGATCGGTTTACAGAGCTCTAGGCCTCATGGTGGCAGCATCACCTTGTGCTTTGGCTGTTGCACCATTGGCTTATGCCATTGCAATAAGTTCCTGTGCAAGAAAGGGGATATTGTTGAAAGGTGGACGTGTATTAGATGCTTTAGCTGCTTGTCACACTATAGCATTTGATAAAACTGGGACGTTAACCACTGGAGGCCTTTTTTTCAAAGCGATTGAACCAATTTACGGACATGAGGTAGGAGAAAACAAACCAGAGTTTGGTTCATGTTGCATTCCCTGCTGTGAAGAAGAAGCTCTTGCTGTAGCAGCTGCAATGGAGAAGGGTACTACTCACCCCATTGGGAGAGCTGTGGTCGACCATAGTATGGGAAAAGACCTCCCTTCCTTTTCTGTGCAGAGTTTGGAATATTTTCCGGGTAGAGGACTTGTCGCAAATCTGCATGGTAGTGAGTCAGGTGGGAAACTATTGAAAGCATCTCTTGGTTCCTTAGATTTCATCACTTCATGCTACAAATCTGGAACCAAATCAAAAGAGATCAAAGAAGCTGCAAACACATCTTCATATGGACGTGCGTTTGTTCATGCTGCTCTTGCGGTTGATGGGAAGGTAACACTTATTCATCTTGAGGATCGACCTCATCCTGGAGTTTCAAGTGTAATATCTGAATTAACAGATAGAGCAAGACTTCATGTAATGATGTTGACTGGAGATCATGAGTCAAGTGCACGAAGAGTCGCAAATGCAGTAGGCATCAAGGAAGTCCACTTCAGTCTAAAGCCTGAAGATAAACTTAGTCACGTGAGAAGCATCTCTAGGAAGAATGGAGGAGGACTAATTATGGTTGGTGAAGGGATTAATGATGCACCAGCACTTGCTGCTGCTACCGTAGGCATAGTGCTTGCTCAACGTGCTAGTGCAACTGCTATAGCTGTGGCAGACGTTCTATTGCTGCGGGATAACATATCTGGTGTACCATTCTGTATTGCCAAGTCTCGCCAGACAACTGCTCTTGTTAAACAGAATGCTAGTCTTGCCTTGTTTTTTATATTTGTGGCTTCTTTTCCTGCTGTTTTAGGGTTTCTTCCCTTATGGTTAACGGTACTTCTACACGAAGGTGGTACGCTTCTAGTTTGTCTCAATTCCATACGCGCTCTGAATAATCCTAGTTGGTCCTGGGGGCAAGACTTGAAGCAATTGCTAATGGAGTTGAAATTTAAGGGCTCGCAGCCAAGGCTTGATACCAGCTCTACCACTGTACAATCTACCCCTGTATAG | 2454 | 44.13 | MGTLSFPIPSSKFHLLSNPNPVSLFTHPFLQSSFSSSPFPPRNFPILHLRRRVLCSAAAAGRSNHDDDHHVHDHNHGHHHHHHHGHHHCDHDVELSGPQKAVIEFAKATRWTDLANYLRESLQLCCCSMALFVAAAVCPYLVPKPIVKPLQIAFIVIGFPLVGVSSALDALTDIIGGKVNIHVLMALAAFASIFMGNSLEGGLLLAMFNLSHIAEEYFTSRAMIDVKELKENYPDFALVLDTNDGEVPNITDLSYQKVPVQDVEVDSYILVGAGEFVPVDCEVFQGSATVTIEHLTGEIKPLEILVGSRVPGGARNLDGRIIVKATKTWKESTLSRIVNLTEEAQLNKPRLQRWLDEFGEHYSKAVVVLATAIALVGPILFKWPFIGTSACRGSVYRALGLMVAASPCALAVAPLAYAIAISSCARKGILLKGGRVLDALAACHTIAFDKTGTLTTGGLFFKAIEPIYGHEVGENKPEFGSCCIPCCEEEALAVAAAMEKGTTHPIGRAVVDHSMGKDLPSFSVQSLEYFPGRGLVANLHGSESGGKLLKASLGSLDFITSCYKSGTKSKEIKEAANTSSYGRAFVHAALAVDGKVTLIHLEDRPHPGVSSVISELTDRARLHVMMLTGDHESSARRVANAVGIKEVHFSLKPEDKLSHVRSISRKNGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRDNISGVPFCIAKSRQTTALVKQNASLALFFIFVASFPAVLGFLPLWLTVLLHEGGTLLVCLNSIRALNNPSWSWGQDLKQLLMELKFKGSQPRLDTSSTTVQSTPV* | 818 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6278501 | 6289433 | - | Chy11G191380.1 | Chy11g00558 | 236319 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g00558 | 817 | PANTHER | PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 | 50 | 812 | - | - | |
Chy11g00558 | 817 | Gene3D | - | 219 | 345 | - | - | |
Chy11g00558 | 817 | SUPERFAMILY | Calcium ATPase, transduction domain A | 250 | 340 | IPR008250 | - | |
Chy11g00558 | 817 | PRINTS | P-type cation-transporting ATPase superfamily signature | 447 | 461 | - | - | |
Chy11g00558 | 817 | PRINTS | P-type cation-transporting ATPase superfamily signature | 698 | 710 | - | - | |
Chy11g00558 | 817 | PRINTS | P-type cation-transporting ATPase superfamily signature | 620 | 630 | - | - | |
Chy11g00558 | 817 | PRINTS | P-type cation-transporting ATPase superfamily signature | 674 | 693 | - | - | |
Chy11g00558 | 817 | Gene3D | - | 458 | 605 | IPR023299 | GO:0000166 | |
Chy11g00558 | 817 | MobiDBLite | consensus disorder prediction | 65 | 92 | - | - | |
Chy11g00558 | 817 | Pfam | haloacid dehalogenase-like hydrolase | 445 | 687 | - | - | |
Chy11g00558 | 817 | SFLD | Haloacid Dehalogenase | 429 | 727 | - | - | |
Chy11g00558 | 817 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 254 | 469 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Chy11g00558 | 817 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 590 | 754 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Chy11g00558 | 817 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 449 | 455 | IPR018303 | - | |
Chy11g00558 | 817 | SUPERFAMILY | HAD-like | 445 | 774 | IPR036412 | - | |
Chy11g00558 | 817 | CDD | P-type_ATPase_HM | 125 | 776 | - | - | |
Chy11g00558 | 817 | TIGRFAM | ATPase-IB_hvy: heavy metal translocating P-type ATPase | 181 | 776 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Chy11g00558 | 817 | Pfam | E1-E2 ATPase | 251 | 427 | - | - | |
Chy11g00558 | 817 | Gene3D | - | 440 | 725 | IPR023214 | - | |
Chy11g00558 | 817 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 183 | 441 | IPR023298 | - | |
Chy11g00558 | 817 | SFLD | p-type atpase | 429 | 727 | IPR044492 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy11g00225 | Chy-Chr11:2099911 | Chy11g00558 | Chy-Chr11:6278501 | 8.65E-44 | dispersed | |
Chy11g00510 | Chy-Chr11:5556956 | Chy11g00558 | Chy-Chr11:6278501 | 0 | dispersed | |
Chy11g00558 | Chy-Chr11:6278501 | Chy02g02243 | Chy-Chr2:26524277 | 3.40E-58 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g00558 | K01534 | - | jre:109009121 | 1108.59 |