Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00568 ATGGATGTTCTCATCCTTTCCATTTCTCTTTCTCTATTCTCTCTCCTTCTTGCCTTAAACTTTCTTCTTCGACCTCATCGCCAAAACCTTCCTCCAACCCCATTTTTCTGTCTTCCAGTCATTGGTCATCTCCATCTCATCAAACATCCTCTCCATAGAATCCTTCACAACCTCTCCAAAAACTACGGACATGTCTTCTCTCTTCGATTTGGTTCACGACTCGTAGTAATCATATCGTCCCCTTCCGTTGTCCAAGAATGTTTCACAAAGAACGATATCATTCTCGCAAACCGACCCTTATTAGACACAGGAAAACACTTAGCATATAACCACACCACCATGGCTGTTGCCCCTTATGGCGAACACTGGCGAAACCTACGTAGAATCGGTGCGCTCGAGTTATTCTCAACGAGTCGAATAAATCTATTCTCGAGAATGCGAGAGGAAGAAGTTAAAGCGTTGATGGTAAGATTATGCGGGAGTTCGTCGTTGGAAGGGTTCCGGGCAGTGGAGATGGAGAGTATGTTGTTAGATCTTATGTACAATGTTATTATGGGAATGATGGGTGGGAAGAAGGGTTGTGAAGAGGATGAGGGAAAATCTAAGGAATTTAGAGAGATGGTGACGAAGATTATGGCTGTCGGAGGGGCGTCGAATCCGGGAGATTTTATAGCTATTTGGAATTGGATTGATCCGAGCGGGTTGAAGAAGAAGGTATTGAAGCTTGGACAAACAATGGATGTTCTTCTTCAAGATTTAGTTGATGGGATGAGAAATGAGAGTGGTGAAGGGAATACTATGATTCATCGTTTACTTCAGTTGCAGAAAATTGAACCGGAGAATCACAGTGATCAAATTATCAAAGGCTTAATACAAATCATATTAATAGCAGGAATTGACACAGCAGCTGTAACTTTAGAATGGGCGCTCTCTCATCTACTAAACAATCCAGATGTGTTAGAGAAAGCAAAAATTGAGATAGACAATGTCGTAGGACAAGAGCGTCTAGTAAATGAAGCTGATTTGCCAAGTTTGACCTATTTACAAGGAATAATTTTTGAGACTCTTCGATTGAGTCCAGCAGCTCCTTTGCTTGTTCCACATTGCTCTTCTGAAGATTGTAAAATTGGAGGCTACAATGTACCACGTGACACAATTGTAATAATTAATGCTTGGGCTATTCATAGAGACCCCAACCTATGGGAAGATGCCACCAGTTTTAAGCCTGAAAGACATACGAACCCTGTTGGAGTCGAGTCATATAAATTCTTACCATTTGGATTGGGAAGGAGAGCTTGCCCTGGTATAGGAATAGCCCAAAGGATGGCTAACTTAACTTTGGCAACAATGATTCAATGCTTTGAGTGGGAAAGAGAGGGCTCTTCATTGGTTGACATGAGTGAAGGTGAAGGACTTACTATGCCCAAAGCTCAACCATTGATAGCCAAATGCAAACCACGTCCAATCATGAAGGCTATGTTTAGTGATGAAAGAGAGTTTGATCAAAATATATCTCAAAATGGAATGTGA 1530 41.57 MDVLILSISLSLFSLLLALNFLLRPHRQNLPPTPFFCLPVIGHLHLIKHPLHRILHNLSKNYGHVFSLRFGSRLVVIISSPSVVQECFTKNDIILANRPLLDTGKHLAYNHTTMAVAPYGEHWRNLRRIGALELFSTSRINLFSRMREEEVKALMVRLCGSSSLEGFRAVEMESMLLDLMYNVIMGMMGGKKGCEEDEGKSKEFREMVTKIMAVGGASNPGDFIAIWNWIDPSGLKKKVLKLGQTMDVLLQDLVDGMRNESGEGNTMIHRLLQLQKIEPENHSDQIIKGLIQIILIAGIDTAAVTLEWALSHLLNNPDVLEKAKIEIDNVVGQERLVNEADLPSLTYLQGIIFETLRLSPAAPLLVPHCSSEDCKIGGYNVPRDTIVIINAWAIHRDPNLWEDATSFKPERHTNPVGVESYKFLPFGLGRRACPGIGIAQRMANLTLATMIQCFEWEREGSSLVDMSEGEGLTMPKAQPLIAKCKPRPIMKAMFSDEREFDQNISQNGM* 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6481073 6483934 - Chy11G191480.1 Chy11g00568 236329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00568 509 Pfam Cytochrome P450 32 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00568 509 Gene3D Cytochrome P450 23 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00568 509 SUPERFAMILY Cytochrome P450 31 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00568 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Chy11g00568 509 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 7 493 - -
Chy11g00568 509 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00568 509 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00568 509 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00568 509 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00568 509 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00568 509 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00568 509 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00568 509 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00568 509 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00568 509 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00568 509 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00568 509 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00568 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 493 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g00568 Chy-Chr11:6481073 Chy11g00576 Chy-Chr11:6578908 0 dispersed
Chy11g01855 Chy-Chr11:24805471 Chy11g00568 Chy-Chr11:6481073 1.72E-154 dispersed
Chy11g00566 Chy-Chr11:6442407 Chy11g00568 Chy-Chr11:6481073 1.50E-121 proximal
Chy11g00568 Chy-Chr11:6481073 Chy11g00569 Chy-Chr11:6495764 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00568 K13260 - csv:101204413 959.518