Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00569 ATGGATAATAACATTTTGGTCTACTTTTTCCTCTTTCTGATCTCTCTCCTTTTGGGCCTCAAACTTTTGCTACACCATGGCAAAAACCTTCCACCAACCCCACTCTTTTCCCTTCCATTAATAGGCCATCTCCATCTCCTCAAACACCCTATCCACCAAACCCTTCACAGCCTCTCAAAAAAGTATGGCCATGTCTTTTCTCTCCGATTCGGCTCCCATCTCGTTGTAGTTATATCATCTCCTTCCGCCGTTCGTGAATGCTTCACAAAAAACGACATCATTCTCGCAAATCGACCATTCTTAAACACCGGAAAGCACCTATCGTACAACTTCACGGTACTAGCCGTCGCCCCATATGGAGAGCTTTGGCGTAGCCTTCGCCGCATTAGTACTTGTGAGATTTTCTCTACAAGTAAACTCAATTCGTTCTCGGGTATACGACAAGATGAAGTGAAGCGATTGTTGCATAGATTGTGTAATCGCAATTCGGTCGAAGAATTACTATTGTTTTCAGCTGTGGAACTGGAGCCAATGTTGTTGGATTTTACATCTAATATTGTCATGAGGATGGTTGGGGGAAAGAGGTATTTTGGAGATGATGTGTTGGATGAAGGACAAGCTGAGAAATTTAGAGATGTTGTGAAGAGAGTGATGTTGTATGCTGGGGCAACTAATCCAGGAGATTTTATACCATTATGGAATTGGATTGATCCAACTGGTCTGGAGAAGAAGATCATGAAAGTTGGGGAAGAAGCTGATGAAATATTTCAAGGTTTGATTGATGAGATTAGGAATGAAGAAGCAGATGGGAACACTATGATTCATCATTTACTTCACTTGCAGAATACTCAACCAGAATACTTTAGTGACCAAATCATCAAAGGCCTCATACATGTTATACTTTTAGCAGGAATTGATACAATATCTGTAACATTAGAATGGGGACTCTCGCACTTGCTCAACAATCCAAAGGTAATAAAGAAAGCGAGACTTGAGATAGAACGTTTTGTTGGACAAGAACGTCTAGTCAACGAAGATGATTTATCAAGTTTGAGTTATTTGCAAGGAATAATCTTAGAAACTTTGCGACTAACCCCAGCAGCCCCTCTACTTGTGCCACACTGTGCATCCGAAGATTGCCAAATCGAAGGGTACGACATACCACGCGACACAATCATATTTGTTAACGCTTGGGCAATACATAGAGATTCAAGTCTATGGAAAGATGTCACTAGTTTTAAGCCAGAAAGGCATGAAAATGCAATAGAATTGTCTGATTCATACAAACTATTACCATTTGGGTTGGGGAGGAGGGCATGCCCTGGTGTAGGAATGGCGCAACGTGTGCTTGGCTTGACATTGGCATCATTGATTCAATGCTTTGATTGGGAAAGAATGGATAGCTCATTAGTTGACATGACTGAAGGCCAAGGTATCACTATGCCAAAAGCTCAACCCTTGGTAGCCAAGTGTAAACCACGCCCTATTATGAGAGCTCATCTTTCATAG 1509 41.62 MDNNILVYFFLFLISLLLGLKLLLHHGKNLPPTPLFSLPLIGHLHLLKHPIHQTLHSLSKKYGHVFSLRFGSHLVVVISSPSAVRECFTKNDIILANRPFLNTGKHLSYNFTVLAVAPYGELWRSLRRISTCEIFSTSKLNSFSGIRQDEVKRLLHRLCNRNSVEELLLFSAVELEPMLLDFTSNIVMRMVGGKRYFGDDVLDEGQAEKFRDVVKRVMLYAGATNPGDFIPLWNWIDPTGLEKKIMKVGEEADEIFQGLIDEIRNEEADGNTMIHHLLHLQNTQPEYFSDQIIKGLIHVILLAGIDTISVTLEWGLSHLLNNPKVIKKARLEIERFVGQERLVNEDDLSSLSYLQGIILETLRLTPAAPLLVPHCASEDCQIEGYDIPRDTIIFVNAWAIHRDSSLWKDVTSFKPERHENAIELSDSYKLLPFGLGRRACPGVGMAQRVLGLTLASLIQCFDWERMDSSLVDMTEGQGITMPKAQPLVAKCKPRPIMRAHLS* 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6495764 6497909 - Chy11G191490.1 Chy11g00569 236330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00569 502 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 7 499 - -
Chy11g00569 502 SUPERFAMILY Cytochrome P450 31 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00569 502 Pfam Cytochrome P450 31 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00569 502 Gene3D Cytochrome P450 24 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00569 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Chy11g00569 502 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00569 502 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00569 502 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00569 502 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00569 502 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00569 502 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00569 502 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00569 502 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00569 502 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00569 502 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00569 502 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00569 502 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00569 502 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00569 502 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 499 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g00569 Chy-Chr11:6495764 Chy11g00576 Chy-Chr11:6578908 0 dispersed
Chy11g00580 Chy-Chr11:6633162 Chy11g00569 Chy-Chr11:6495764 1.80E-143 dispersed
Chy11g00582 Chy-Chr11:6642449 Chy11g00569 Chy-Chr11:6495764 5.69E-21 dispersed
Chy11g00568 Chy-Chr11:6481073 Chy11g00569 Chy-Chr11:6495764 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00569 K13260 - csv:105434396 959.133