Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00576 ATGGATATTCTCTTGCTTTCTATTTCATTCTTTCTACTTTCTGTGATATTTGTCTTCAAATTTCTGCTTCAACCCCATTACTTAAACCTCCCTCCAACCCCACCTTTTTGGCTTCCATTAATAGGCCATCTTCATCTCGTCAAACATCCTGTCCATCAAACACTTCAAAACCTCTCCCAAACATACGGCCATGTCTTCTCTCTCCGATTCGGTTCCCGTCTTGTTGTCGTTGTTTCCTCTCCCTCCGCTGTTCAAGAATGCTTTACAAAGAACGATATCATTCTTGCAAATCGGCCTTTGTTGAAAAGTGGAAAGTACTTAGCATACAATCATTCCACCATTGCACTCTCCCCTTATGGTGAACACTGGCGAAACCTCCGCCGTATTGCCTCTCTTGAGATTTTCTCGACGAAGCGCCTCAACATGTTCTTGGGAATTCGAGAAGATGAAGTCAAGCGTTTGCTAAGTAAGTTAGGTGGTAATCATTATAAGTTGGAAGATGATGGGTTTAGAGTAGTGGAAATGGGACCATTGTTGAAAGATCTTACGTTGAATATTGTTATGAGAATGGTGAGTGGAAAAATGTTTTATGAAGAAGGTTCTACCAAGTTCAGAGAAATTGTGACAAAAATTATGGAACATGGTGGAGCAAGTAGTCCAGGAGATTTCATACCTTTATGGAATTGGATTGATCCAACTGGTTTTATGAAGAAAGTGAAGAAGCTTGGAAAGACATCAGATGAATTTCTTCAACAGTTAATTGATGGGATTAGGAATCAAAATGATGGAGGAAACACTATGATTCACCATTTACTTACCTTGCAGGATGTTGAGCCTGAATTTTACAATGATCATGCTTTCAAAGTACTCATTCAAGATATAATATTAGCCGGAATTGACACGTCAGCTGTGACTTTGGAGTGGGCACTATCTCAATTGCTAAACAATCCAGAGGTACTAAAAAAAGCAAAAGAAGAGATAGATTGTTTGATTGGGAATGAACGTCTAGTTAGTGAAGCTGATCTACCAAATTTGAGTTACCTTCAAGGAATAATCTCCGAGACTTTACGACTTCATCCACCTGGTCCTCTTCTCGTGCCACATTGTGCATTATTTGAAGGGTGCAAAATAAAAGGATATGATATTCCACGTGATACAATTGTATTGATTAATGCTTGGGCTATCCATAGAGATTCAAGTCTTTGGAAAAATGCCACCAAGTTTAAACCTGAAAGACATGCAAGTGTGATTGAAGGTGAGTTATATAAATTAATACCATTTGGAGTGGGGAGGAGAGCATGTCCTGGTGTAGGACTGGCACAACGAGTGGTTGGCTTAGCTTTAGCATCATTGATACAATGCTTTGAATGGAAAAGAGTAGATGACTCATTAATTGACATGAGTGAAGGTAAAGGACTCACAATGCCCAAAGCTCAACCATTGGTCGCTAAGTGTAAACCGTGTCCAATCATGAAAGTCATTTTGAATGTACACACAACAACTAATAATTGA 1512 39.15 MDILLLSISFFLLSVIFVFKFLLQPHYLNLPPTPPFWLPLIGHLHLVKHPVHQTLQNLSQTYGHVFSLRFGSRLVVVVSSPSAVQECFTKNDIILANRPLLKSGKYLAYNHSTIALSPYGEHWRNLRRIASLEIFSTKRLNMFLGIREDEVKRLLSKLGGNHYKLEDDGFRVVEMGPLLKDLTLNIVMRMVSGKMFYEEGSTKFREIVTKIMEHGGASSPGDFIPLWNWIDPTGFMKKVKKLGKTSDEFLQQLIDGIRNQNDGGNTMIHHLLTLQDVEPEFYNDHAFKVLIQDIILAGIDTSAVTLEWALSQLLNNPEVLKKAKEEIDCLIGNERLVSEADLPNLSYLQGIISETLRLHPPGPLLVPHCALFEGCKIKGYDIPRDTIVLINAWAIHRDSSLWKNATKFKPERHASVIEGELYKLIPFGVGRRACPGVGLAQRVVGLALASLIQCFEWKRVDDSLIDMSEGKGLTMPKAQPLVAKCKPCPIMKVILNVHTTTNN* 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6578908 6581901 - Chy11G191560.1 Chy11g00576 236337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00576 503 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00576 503 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00576 503 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00576 503 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00576 503 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 494 - -
Chy11g00576 503 Pfam Cytochrome P450 32 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00576 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Chy11g00576 503 Gene3D Cytochrome P450 23 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00576 503 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00576 503 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00576 503 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00576 503 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00576 503 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00576 503 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00576 503 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00576 503 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00576 503 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00576 503 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 9 494 - -
Chy11g00576 503 SUPERFAMILY Cytochrome P450 32 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g00568 Chy-Chr11:6481073 Chy11g00576 Chy-Chr11:6578908 0 dispersed
Chy11g00569 Chy-Chr11:6495764 Chy11g00576 Chy-Chr11:6578908 0 dispersed
Chy11g00576 Chy-Chr11:6578908 Chy11g00581 Chy-Chr11:6640027 0 dispersed
Chy11g00576 Chy-Chr11:6578908 Chy11g00580 Chy-Chr11:6633162 2.79E-130 proximal
Chy11g00576 Chy-Chr11:6578908 Chy11g00582 Chy-Chr11:6642449 4.59E-21 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00576 K13260 - mcha:111017884 704.131