Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00580 ATGTTCCCTATGTTTATGGATCTTACGTTCAATATTGTTATGAGAATGATGAGTGGAAAGAAGTATTGCGGTGATGATTTGAAAGATGAGGAAAGATCCAAAAAATTTAAAGACATGGTGAAACAAGTTTTGGCAATTAGTGGAGCAGGAAATCCAGGAGATTTTATACCGTTATGGAATTGGTTTGATCCAACTTGTTATAATAAGAGGGTAAAGAAGCTTGCAAAGACATCAGATGAACTTATTCAGCAATTAATTGATGAGATTAGGAATCAGAATGATGGAGACAATACAATGATTCAACATTTACTTGGCTTGCAGAATACTCAACCTGAAAATTATAGTGACCAAATTATCAAAGGTCTCGTACAAGTAATACTATTAGCAGGAATCGATACAGCAGCTGTGACCTTAGAATGGGCTTTATGTCATCTGGTCAATAATCCAGAAGTGTTGAAGAAAGCTATAGATGAGATAGATAGCTCCATTGGTCAAGAGTGTTTAGTTAAGGAAGTTGATTTGTTGAGTTTGAGTTATTTGCAAGGAATAATCTTTGAGACCCTACGATTGAATCCAGCAACTCCCTTGCTTGTGCCACATTGTGCATCTGAAGACTGCAAAATAGGAGGCTATGATATACCACGTGACACAACCGTGTTGATTAATGCTTGGGCAATACATAGAGACCCAAGCCTATGGGAAGATGCCACAAGTTTCAAGCCTGAAAGGCATGAAAATGCAAATGGAGTTGCTGCATACAAACTATTGCCATTTGGGTTGGGAAGGAGAGCTTGCCCTGGAGTGGGAATGGCACAACGTGTAGTTGCCTTGACTTTGGCATCATTGCATTGGTGGATATGA 861 38.79 MFPMFMDLTFNIVMRMMSGKKYCGDDLKDEERSKKFKDMVKQVLAISGAGNPGDFIPLWNWFDPTCYNKRVKKLAKTSDELIQQLIDEIRNQNDGDNTMIQHLLGLQNTQPENYSDQIIKGLVQVILLAGIDTAAVTLEWALCHLVNNPEVLKKAIDEIDSSIGQECLVKEVDLLSLSYLQGIIFETLRLNPATPLLVPHCASEDCKIGGYDIPRDTTVLINAWAIHRDPSLWEDATSFKPERHENANGVAAYKLLPFGLGRRACPGVGMAQRVVALTLASLHWWI* 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6633162 6635204 - Chy11G191600.1 Chy11g00580 236341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00580 286 Gene3D Cytochrome P450 1 286 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00580 286 PRINTS E-class P450 group I signature 255 265 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00580 286 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00580 286 PRINTS E-class P450 group I signature 265 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00580 286 PRINTS E-class P450 group I signature 138 164 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00580 286 PRINTS E-class P450 group I signature 8 26 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00580 286 PRINTS E-class P450 group I signature 222 246 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00580 286 PRINTS E-class P450 group I signature 118 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00580 286 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 258 267 IPR017972 GO:0005506|GO:0016705
Chy11g00580 286 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 3 282 - -
Chy11g00580 286 PRINTS P450 superfamily signature 182 193 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00580 286 PRINTS P450 superfamily signature 265 276 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00580 286 PRINTS P450 superfamily signature 256 265 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00580 286 PRINTS P450 superfamily signature 129 146 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00580 286 SUPERFAMILY Cytochrome P450 1 284 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy11g00580 286 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 282 - -
Chy11g00580 286 Pfam Cytochrome P450 2 281 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g00580 Chy-Chr11:6633162 Chy11g00569 Chy-Chr11:6495764 1.80E-143 dispersed
Chy11g00576 Chy-Chr11:6578908 Chy11g00580 Chy-Chr11:6633162 2.79E-130 proximal
Chy11g00580 Chy-Chr11:6633162 Chy11g00581 Chy-Chr11:6640027 8.00E-115 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00580 K13260 - csv:101205391 552.747