Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00585 ATGGTGATTCAGAGAGAAATGGAATTAAGAAGACCTGGTTATGTGGTTGTTTTTGTGACTCTCCTTTGTGCATTGGCAATTGCGAGTTCGGAAGGCAGAAGGAAGACGGTCGAAATGGTTCTTACCAATGCCGATTACTATACATCATCGAACTTGGATAAAGATATGGGAGAGAAGGCATGCATGAAAGAATTAGCAGAGAAAGAATATGAACATGAACATGAAGAATCTCTTGTTCCTCACATCAAAACTGAAAACATGGGTAAAAAAGCTATAAGAATTCTACCACCTGATATGAAACAGGACGTGTTGTATTGCTTAAGAAAGAAAACTACGCTTTCTCGTAGTTCTGAATCAAGTTCTATTTTATTTGATCGGTTTAGCAAACCAATTGAGTTGTTCTTAAATGGAGGGTCCAATATTCATATGAAACGTCTAATTAGATCATCGCAAGATTCACTAAAACGGTATCTTGCTGAAGCTTCATCTCCACCTGCACCTCCGTCACCATCGCCTGGAGCAGAGTCACCAGTAAATTCTCCATTACCGTCTCCTAGTCATGCTCCAATGCCATCACCAAGTCATGCCCCAGCCAAGTCTCCAATTCATGCCCCAGCCAAGTCTCCCAGTCATGCCCCAGCCAAGTCTCCAAGTCATGCCCCAGCCAAGTCTCCAAGTCATGCCCCAGCCAAGTCTCCAAGTCTTGCCCCAGCCAAGTCTCCATCACGAAACCTCCATCCACCTGTTGAGGGTACAGCACGGTCTCGGTCTCGAGAACCGCCACCGGACGACACCAATGTTCCGGATTTGCCTACACCTTCTGTAGTTCGCTCGCCACCTCCTCCACGTGCTTCTTCCAAATCTCGACCTCCAAAGAAGCATGAAGAAGACCAGACAGTCATAATTGCTGGTATTATAGCAGCTGGTTTGGGAGTTGTTCTTGTGGTTGCTTTACTTTTGTTCTGCTGTCGTAAAGGTGAGAAAAGTAAAGTTGATCCAAAGGATGGGCAAAAGGATGAGAGACCTCTCTTAAACATATCTTTGAGTGAATTATCAGCAGGTTCTTCACAGAAGTCATACAACCTTGGAAATTCAGGTACGAATGCTGATAATGGAACTAAACCCTCCTCATTTGTTGGCAACTTATCAGTGAATCCTGAAAATGGCACTTCTATGGCTGAGGCTCAAACATCTGATGGTAAATCATCAGCAATGCCGCATATAAAACCTCCGCCTGGAAGATTAGATTCTCAACCTCCTCCACCTGCACCAGCACCAGTGGCAGCACCTCCACCACCTCCGCCGCCTGCTCCTAGAGCCCCACCACCACCACCTCTAAAAGTTGGTCGACCCCCACCTGCACCACCGGGAGCAGTCCCTGGTAAACCTCAAGCAGTGCCTATTGGGCCACATCGACGAGGACCTAGCGGCTCAAGTATGGATGCAGATTCAGGAAGCCAAAAGACCAAGTTAAAGCCCTTTTTCTGGGATAAGGTTCTTGCTAACCCTGGGCAATCTATGGTCTGGCACGAGATTAGTGCTGGATCATTCCAATTCAATGAGGAGATGATGGAGTCCTTGTTTGGATATACAGCAGTAGAAACTAACAAAGGCGACCGCAAGAAAGATTCAGTATCAGACCCTTCATTACAATACATTCAAATCATTGATGCTAAGAAAGCTCAAAACCTTTCAATTCTCCTACGAGCACTGAATGTAACAACAGCAGAAGTATTAGATGCTCTTGAAGAAGGAAATCCTGATCTTCCAGCAGAGCTTTTACAGACCTTGTTGAAAATGGCACCAACAACAGAAGAGGAACTAAAACTTAGACTATTTTCAGGGGAGCTTTCTCAGTTAGGTCCAGCAGAACGATTCCTTAAAGTGTTAGTGGATGTTCCTTTTGCTTTTAAACGATTAGAGTGTCTTCTCTTCATGCTCTCAATGTCGGAAGATGTCACTAACATTAAGGAATCATTCGCAACTCTAGAGGTCGCCTGCAACAATCTTAGAAACAGCAGGCTGTTTCTCAAGCTATTAGAAGCAGTTCTCAAAACTGGAAACCGAATGAACGATGGGACGTACCGTGGTGGTGCTCAGGCATTCAAGCTCGACACGCTCTTGAAACTGGCAGATGTTAAAGGAACTGACGGCAAGACTACGCTCTTACACTTCGTCGTACAAGAGATTATTCGTTCAGAAGGCATACGAGCAGCTCGTTCTGACAGACAAAGCCGGAGTTCATCCAGCATAGTCTCCAACGATACGATTTTTGAAGACTTCGCCGACGATTCAACGGAACATTATCGACAATTAGGTCTACAAGTGGTTTCTGGTTTGAGCAAGGAGTTGGAAAACGTGAAAAAAGCGGCTGCAGTAGATGCGGATGGACTAACAACAACGATATCAAAACTTGGCCAATCTCTAATTAAAACAAAAGCATTTATAGACGCGGAGATGAAAAGTTTAGACGAAGACAGCAAATTCCACCAATCAATGTCGAAATTTTTAGAAGGAGCTGAAGCGGACATAGCGTGGATTGCAGTGGAAGAAAAGAAGATAATGGCGTTGGTGAAAAGCACAGTGGATTACTTCCATGGAAACTCAGGAAAGGAAGAAGGATTGAGATTGTTTACGATCGTACGCGATTTCTTGATTGTGTTGGACAAAACTTGTAAACAGGTGAAAGAAGCAGCTGAGGCTGCAGCCAAGCAAGCGAAGAATAACAAAAAAGAAACTGCCACACCGTCGGCTGCTTGTCAACAGAATTCAGATCTAAGGCAGCGACTATTTCCGGCGATTGTAGAACGACGGATAGGTGATGATGAGTCAAGTTCTTCGGAGGACGATGATGGGGAGATTTCATCTTCATCATCATCCTAG 2883 44.75 MVIQREMELRRPGYVVVFVTLLCALAIASSEGRRKTVEMVLTNADYYTSSNLDKDMGEKACMKELAEKEYEHEHEESLVPHIKTENMGKKAIRILPPDMKQDVLYCLRKKTTLSRSSESSSILFDRFSKPIELFLNGGSNIHMKRLIRSSQDSLKRYLAEASSPPAPPSPSPGAESPVNSPLPSPSHAPMPSPSHAPAKSPIHAPAKSPSHAPAKSPSHAPAKSPSHAPAKSPSLAPAKSPSRNLHPPVEGTARSRSREPPPDDTNVPDLPTPSVVRSPPPPRASSKSRPPKKHEEDQTVIIAGIIAAGLGVVLVVALLLFCCRKGEKSKVDPKDGQKDERPLLNISLSELSAGSSQKSYNLGNSGTNADNGTKPSSFVGNLSVNPENGTSMAEAQTSDGKSSAMPHIKPPPGRLDSQPPPPAPAPVAAPPPPPPPAPRAPPPPPLKVGRPPPAPPGAVPGKPQAVPIGPHRRGPSGSSMDADSGSQKTKLKPFFWDKVLANPGQSMVWHEISAGSFQFNEEMMESLFGYTAVETNKGDRKKDSVSDPSLQYIQIIDAKKAQNLSILLRALNVTTAEVLDALEEGNPDLPAELLQTLLKMAPTTEEELKLRLFSGELSQLGPAERFLKVLVDVPFAFKRLECLLFMLSMSEDVTNIKESFATLEVACNNLRNSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRSEGIRAARSDRQSRSSSSIVSNDTIFEDFADDSTEHYRQLGLQVVSGLSKELENVKKAAAVDADGLTTTISKLGQSLIKTKAFIDAEMKSLDEDSKFHQSMSKFLEGAEADIAWIAVEEKKIMALVKSTVDYFHGNSGKEEGLRLFTIVRDFLIVLDKTCKQVKEAAEAAAKQAKNNKKETATPSAACQQNSDLRQRLFPAIVERRIGDDESSSSEDDDGEISSSSSS* 961
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6671338 6674784 - Chy11G191650.1 Chy11g00585 236346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00585 960 MobiDBLite consensus disorder prediction 163 198 - -
Chy11g00585 960 SUPERFAMILY Formin homology 2 domain (FH2 domain) 431 906 - -
Chy11g00585 960 Gene3D Formin, FH2 domain 490 927 IPR042201 -
Chy11g00585 960 PANTHER FORMIN-RELATED 7 948 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Chy11g00585 960 PANTHER FORMIN-LIKE PROTEIN 3 7 948 - -
Chy11g00585 960 MobiDBLite consensus disorder prediction 354 488 - -
Chy11g00585 960 MobiDBLite consensus disorder prediction 264 286 - -
Chy11g00585 960 MobiDBLite consensus disorder prediction 157 295 - -
Chy11g00585 960 ProSiteProfiles Formin homology-2 (FH2) domain profile. 481 914 IPR015425 -
Chy11g00585 960 Coils Coil 892 912 - -
Chy11g00585 960 SMART it6_source 481 903 IPR015425 -
Chy11g00585 960 MobiDBLite consensus disorder prediction 905 960 - -
Chy11g00585 960 MobiDBLite consensus disorder prediction 908 928 - -
Chy11g00585 960 MobiDBLite consensus disorder prediction 354 403 - -
Chy11g00585 960 Pfam Formin Homology 2 Domain 486 887 IPR015425 -
Chy11g00585 960 MobiDBLite consensus disorder prediction 412 463 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00293 Chy-Chr2:1912943 Chy11g00585 Chy-Chr11:6671338 1.21E-10 dispersed
Chy04g01020 Chy-Chr4:15124871 Chy11g00585 Chy-Chr11:6671338 0 dispersed
Chy11g00235 Chy-Chr11:2211403 Chy11g00585 Chy-Chr11:6671338 4.49E-126 dispersed
Chy11g00585 Chy-Chr11:6671338 Chy12g01523 Chy-Chr12:18995713 1.09E-28 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00585 - - csv:101206094 1373.61