Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g00586 | ATGGACAACCCTCCACCAAACTGGAATTGGCTCTTCGATTACTCTACAGTGGATGATCTCGCCGTCGTCGACCCTCGATTCTCGCCCCCACAGTCCATCAGTTTCTCCTGGTCCAATCCCTCCATCAATTTTTCATCTAAAGACAGCCTTGACGTAGATTGTTCATATGAAGATCTGGACAGCACAAAGGAAGTGGGTCGGAAACGGCTAAGGGGTGAAACAAGTGCTGCATCTACCTCCAAAGCCTGCAGAGAGAAACAGAGGAGAGATAAGCTGAATGAGAGGTTCTTGGAATTGGCTGCTGTCCTGGAACCTGGAAAACCACCCAAAAGCGACAAGGTTGCAATCTTGAGTGATGCTATCAGAATGATGACTGATTTACAATGTGAAACTCAGAAGCTGAGAGAATCAAAGGAGGATTTGAAGGCAAAAATCAAAGAACTAAAGGTTGAGAAAAATGAACTTCGTGATGAGAAGCAAAGGTTGAGAGCAGAGAAAGAAAAGTTGGAGCTGCAAATCAGAGCAGTGAACACTCGAACAGCTGATGTTCAGCATCCTCCCCCTACACTGTCAGCTGCATATACAGCACAAGGGCAATCGGCTGGTAACAAATTGATGCCTTTCATTGGTTATCCTGGCATTGCCATGTGGCAGTTCTTGCCGCCTGCAGCTGTCGACATATCACAGGATCATGTGCTTCGCCCACCGGTTGCTTAA | 717 | 46.86 | MDNPPPNWNWLFDYSTVDDLAVVDPRFSPPQSISFSWSNPSINFSSKDSLDVDCSYEDLDSTKEVGRKRLRGETSAASTSKACREKQRRDKLNERFLELAAVLEPGKPPKSDKVAILSDAIRMMTDLQCETQKLRESKEDLKAKIKELKVEKNELRDEKQRLRAEKEKLELQIRAVNTRTADVQHPPPTLSAAYTAQGQSAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA* | 239 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6690012 | 6692956 | + | Chy11G191660.1 | Chy11g00586 | 236347 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g00586 | 238 | MobiDBLite | consensus disorder prediction | 65 | 88 | - | - | |
Chy11g00586 | 238 | PANTHER | BHLH TRANSCRIPTION FACTOR | 5 | 238 | IPR044818 | GO:0003700|GO:0006355|GO:0046983|GO:0055072 | |
Chy11g00586 | 238 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 76 | 127 | IPR011598 | GO:0046983 | |
Chy11g00586 | 238 | Pfam | Helix-loop-helix DNA-binding domain | 79 | 128 | IPR011598 | GO:0046983 | |
Chy11g00586 | 238 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 81 | 152 | IPR036638 | GO:0046983 | |
Chy11g00586 | 238 | CDD | bHLH_AtILR3_like | 81 | 156 | - | - | |
Chy11g00586 | 238 | Gene3D | arf6 gtpase in complex with a specific effector, jip4 | 126 | 180 | - | - | |
Chy11g00586 | 238 | PANTHER | BHLH DOMAIN CLASS TRANSCRIPTION FACTOR | 5 | 238 | - | - | |
Chy11g00586 | 238 | SMART | finulus | 82 | 133 | IPR011598 | GO:0046983 | |
Chy11g00586 | 238 | Coils | Coil | 124 | 179 | - | - | |
Chy11g00586 | 238 | Gene3D | - | 68 | 125 | IPR036638 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy04g01011 | Chy-Chr4:14888996 | Chy11g00586 | Chy-Chr11:6690012 | 3.13E-88 | dispersed | |
Chy04g01015 | Chy-Chr4:14961646 | Chy11g00586 | Chy-Chr11:6690012 | 5.83E-89 | dispersed | |
Chy06g00483 | Chy-Chr6:3237018 | Chy11g00586 | Chy-Chr11:6690012 | 1.05E-43 | dispersed | |
Chy11g00295 | Chy-Chr11:2718166 | Chy11g00586 | Chy-Chr11:6690012 | 1.34E-13 | dispersed | |
Chy11g00586 | Chy-Chr11:6690012 | Chy12g01019 | Chy-Chr12:15419503 | 1.35E-69 | dispersed | |
Chy11g00586 | Chy-Chr11:6690012 | Chy02g00573 | Chy-Chr2:3449042 | 2.40E-19 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18690 | PF00010 | HLH | 8.50E-10 | No_clan | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g00586 | - | - | csv:101212433 | 473.011 |