Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00594 ATGAGAATGGAGAGGCTTACTTTTTTGGTATTGGCCACTATAGTTGGTCTTCTAAGCCTGATAGGCTCCACTCAAGCTCAGCTAAAGCTTGGTTTCTATGCCAAAAGCTGCCCAAACGCTGAGAAGATTGTGCTAGATTTCGTTCACCAGCATATCCACAATGCCCCTTCGTTGGCAGCAACTTTCATTAGAATGCACTTCCACGATTGCTTTGTCAGGGGTTGTGATGCATCTGTGCTTATAAACTCCACCTCAAATAACCAAGCTGAGAAGGATTCTGCACCAAATCAAACACTAAGAGGCTTTGACTTCATTGATAGAGTCAAAAGCTTACTTGAAGATGAATGCCCTGGAGTGGTCTCTTGCGCAGATGTTCTTTCCTTGATTGCAAGAGATACCATTGTAGCCACAGGAGGTCCTTACTGGGAAGTTCCAACTGGCCGAAGAGATGGAGTGATCTCAAGATCAAGGGAAGCTTTAAATAACATTCCTCCTCCATTTGGAAACTTGTCCACGCTCCAAAGACTTTTCGCAAACCAAGACCTTGATCTAAAAGACTTGGTGCTACTATCTGGCGCTCACACAATCGGCATAGCACACTGCCAATCATTCAGCAATCGACTCTACAATTTCACCGGGGTAGGAGACCAAGATCCCTCTCTAGACCCAAGATACGCTGCTAATCTGAAGGCTAACAAATGCCGAACTCCCACCGCCAACAACAAAGTGGAAATGGACCCAGGAAGTCGCAACACTTTTGACCTTAGCTACTATTCTCTTCTACTAAAAAGGAGGGGCCTCTTCGAATCCGATGCTGCTCTTACAACAGACGCAACAACATTGGGTTTAGTTCAGAAACTGGTAGAAGGACCCATTGAAGAATTCTTCGCTGAATTTGCAGCATCCATGGAGAAAATGGGTCGGATTAAAGTGAAAACTGGAACTGAAGGTGAAATCAGAAGGAAATGCGGCGTGGTGAATAGTTGA 987 44.98 MRMERLTFLVLATIVGLLSLIGSTQAQLKLGFYAKSCPNAEKIVLDFVHQHIHNAPSLAATFIRMHFHDCFVRGCDASVLINSTSNNQAEKDSAPNQTLRGFDFIDRVKSLLEDECPGVVSCADVLSLIARDTIVATGGPYWEVPTGRRDGVISRSREALNNIPPPFGNLSTLQRLFANQDLDLKDLVLLSGAHTIGIAHCQSFSNRLYNFTGVGDQDPSLDPRYAANLKANKCRTPTANNKVEMDPGSRNTFDLSYYSLLLKRRGLFESDAALTTDATTLGLVQKLVEGPIEEFFAEFAASMEKMGRIKVKTGTEGEIRRKCGVVNS* 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6782609 6783934 - Chy11G191740.1 Chy11g00594 236355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00594 328 PANTHER PEROXIDASE 14 327 - -
Chy11g00594 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Chy11g00594 328 Gene3D Peroxidase, domain 2 164 306 - -
Chy11g00594 328 Pfam Peroxidase 46 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g00594 328 PANTHER PEROXIDASE 25-RELATED 14 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00594 328 CDD secretory_peroxidase 27 326 IPR033905 GO:0004601|GO:0042744
Chy11g00594 328 ProSiteProfiles Plant heme peroxidase family profile. 27 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g00594 328 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g00594 328 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g00594 328 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g00594 328 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g00594 328 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy11g00594 328 SUPERFAMILY Heme-dependent peroxidases 27 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy11g00594 328 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Chy11g00594 328 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00594 328 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00594 328 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00594 328 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00594 328 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00594 328 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00594 328 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00594 328 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00594 328 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy11g00594 328 Gene3D - 31 327 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g00594 Chy-Chr11:6782609 Chy11g01459 Chy-Chr11:21358776 2.89E-99 dispersed
Chy01g00287 Chy-Chr1:1999479 Chy11g00594 Chy-Chr11:6782609 7.11E-76 transposed
Chy01g00415 Chy-Chr1:2928050 Chy11g00594 Chy-Chr11:6782609 1.03E-123 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00594 K00430 - csv:101213629 629.017