Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00599 ATGACACCGGCCAGAAACATGGGGTCGATGATTGGAAGAAATGGGAATAATGATGTTGCTGGATTTTCCTCTCCTTCTGGACTTCCTTTTTCTCAGCCAAGCATTATGGATGCTCACCTTCTCCCTCTAGACATCCCTCAAAACACTTCCGAAAGCGATCTTGCTCGAATCAGAGATGACGACTTCGACAGTGCTACTAAATCCGGCAGCGACAACAACCATGAGCTCGTGTCCGGTGACGACCAAGATCCTCGTCCTAAAAAGAAGCGTTACCATCGTCATACTCAACATCAGATCCAAGAAATGGAAGCGTTCTTCAAAGAGTGTCCTCACCCTGACGACAAACAAAGAAAGGAATTAAGCAGAGAATTAGGGTTAGAGCCTTTGCAAGTCAAATTTTGGTTCCAAAACAAACGCACTCAAATGAAGAATCAACACGAGAGGCATGAGAATACTCAACTTCGAACAGAAAATGAGAAGCTTAGAGCTGATAACATGAGATATAGAGAAGCCCTAAGCAATGCTTCATGCCCTAATTGTGGTGGCCCTACTGCCATTGGTGAAATGTCTTTTGATGAACATCATCTTAGACTCGAAAATGCCCGTCTCCGTGAAGAGATCGATCGCATATCAGCAATAGCTGCAAAATACGTTGGGAAGCCAGTGGTGAACTACCCTCTACTTTCTCCACCAGTCCCATCTCGTCCACTAGAGTTAGGAATGGCCAACTTCGGACCACAACCTGGCCTGGGAGGAGGAGACATCTACGGCTCCGCCAGCGACCTAATCCGATCCATCAGCACCCCAACGGAGGCCGATAAACCAATGATCATTGAGCTAGCCGTTGCAGCCATGGAAGAGCTAACTAGAATGGCTCAAATGGGTGAGCCATTGTGGATGACTACACTGGATGGCTCCACCCATATGCTCAATGAAGATGAGTACTTAAGAACTTTTCCCAGAGGCATTGGTCCTAAGCCTTCTGGGTTTAAATGTGAAGCCTCTCGTGAATCGGCTGTTGTCATCATGAACCACATTAACCTAGTCGAGATTCTCATGGACGTGAATCAATGGTCGACTTTATTTTCTGGAATTGTATCTAGAGCTATGACACTTGAAGTACTATCAACTGGTGTTGCTGGAAATTACAATGGTGCTTTGCAAGTGATGACGTCGGAATTTCAAGTTCCATCGCCACTAGTTCCGACTCGCGAAAGTTACTACGTTAGATATTGTAAGCAGCATGGAGACGGGACGTGGGTGGTGGTGGATGTTTCGTTGGATGATTTACGCCCTACCCCTGGTGTTCGATGTAGACGAAGACCTTCCGGTTGTTTGATCCAAGAAATGCCAAATGGTTATTCAAAGGTTACATGGGTTGAGCACGTAGAAGTGGATGATAGAGGAGTTCATAATCTTTACAAGCAACTAGTGAGCTCTGGCCAAGCTTTTGGGGCTAAACGCTGGGTTACAACTTTAGACCGCCAATGTGAACGACTCGCCAGTGCCATGGCCACTAACATTCCTACTGGTGATGTTGGAGTGATAACGAATCAAGAAGGGAGAAAGAGTATGTTGAAGCTGGCTGAGAGAATGGTGATAAGCTTTTGTGCTGGAGTGAGCGCCTCCACAACTCACACATGGACTACTTTGTCGGGTACGGGTGCGGACGACGTTCGAGTCATGACTCGAAAGAGCATCGACGACCCAGGAAGACCTCATGGTATTGTCCTTAGTGCGGCAACTTCCTTCTGGCTTCCTGTTCCACCCAAGAGAATCTTCGATTTTCTTCGAGATGAAAACTCTCGCAGTGAGTGGGACATTCTTTCCAACGGCGGAGTAGTTCAAGAAATGGCTCACATTGCCAACGGCCGCGACACTGGCAACTGCGTTTCTCTCCTACGAGTAACCAGCGCAAATTCAAGCCAAAGCAACATGCTAATCTTGCAAGAAAGCTGCACAGACCCAACAGCCTCATTCGTGATCTACGCACCAGTCGACGTAGTAGCAATGAACCTTGTCCTAAATGGTGGCGATCCCGACTATGTAGCACTACTCCCCTCAGGGTTTGCCATTCTTCCGGATGGCGGAGGTGGAGAGGGTGTTTCGGGAGGGTCGTTGCTGACAGTTGCATTTCAAATACTGGTGGATTCAGTGCCAACGGCAAAACTATCACTTGGGTCAGTTGCAACGGTAAACAATCTGATAGCTTGTACGGTGGAAAGGATAAAAGCTTCACTATCATGTGAGAATGCATAA 2259 47.23 MTPARNMGSMIGRNGNNDVAGFSSPSGLPFSQPSIMDAHLLPLDIPQNTSESDLARIRDDDFDSATKSGSDNNHELVSGDDQDPRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELGMANFGPQPGLGGGDIYGSASDLIRSISTPTEADKPMIIELAVAAMEELTRMAQMGEPLWMTTLDGSTHMLNEDEYLRTFPRGIGPKPSGFKCEASRESAVVIMNHINLVEILMDVNQWSTLFSGIVSRAMTLEVLSTGVAGNYNGALQVMTSEFQVPSPLVPTRESYYVRYCKQHGDGTWVVVDVSLDDLRPTPGVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGQAFGAKRWVTTLDRQCERLASAMATNIPTGDVGVITNQEGRKSMLKLAERMVISFCAGVSASTTHTWTTLSGTGADDVRVMTRKSIDDPGRPHGIVLSAATSFWLPVPPKRIFDFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVTSANSSQSNMLILQESCTDPTASFVIYAPVDVVAMNLVLNGGDPDYVALLPSGFAILPDGGGGEGVSGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCENA* 753
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6948159 6953072 + Chy11G191790.1 Chy11g00599 236360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00599 752 SUPERFAMILY Homeodomain-like 75 145 IPR009057 -
Chy11g00599 752 MobiDBLite consensus disorder prediction 1 25 - -
Chy11g00599 752 SMART HOX_1 86 149 IPR001356 GO:0003677
Chy11g00599 752 Gene3D - 329 498 IPR023393 -
Chy11g00599 752 Pfam START domain 280 499 IPR002913 GO:0008289
Chy11g00599 752 SMART START_1 279 499 IPR002913 GO:0008289
Chy11g00599 752 ProSiteProfiles 'Homeobox' domain profile. 85 145 IPR001356 GO:0003677
Chy11g00599 752 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 43 749 IPR042160 -
Chy11g00599 752 SUPERFAMILY Bet v1-like 518 744 - -
Chy11g00599 752 SUPERFAMILY Bet v1-like 270 501 - -
Chy11g00599 752 Coils Coil 139 171 - -
Chy11g00599 752 ProSitePatterns 'Homeobox' domain signature. 120 143 IPR017970 GO:0000981|GO:0006355
Chy11g00599 752 MobiDBLite consensus disorder prediction 61 96 - -
Chy11g00599 752 Pfam Homeodomain 88 144 IPR001356 GO:0003677
Chy11g00599 752 ProSiteProfiles START domain profile. 270 502 IPR002913 GO:0008289
Chy11g00599 752 CDD homeodomain 88 146 IPR001356 GO:0003677
Chy11g00599 752 CDD START_ArGLABRA2_like 274 498 - -
Chy11g00599 752 MobiDBLite consensus disorder prediction 61 87 - -
Chy11g00599 752 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 43 749 - -
Chy11g00599 752 Gene3D - 75 162 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00924 Chy-Chr4:13249200 Chy11g00599 Chy-Chr11:6948159 0 dispersed
Chy06g00925 Chy-Chr6:6797959 Chy11g00599 Chy-Chr11:6948159 0 dispersed
Chy11g00599 Chy-Chr11:6948159 Chy12g01045 Chy-Chr12:15645774 0 dispersed
Chy02g01690 Chy-Chr2:16905993 Chy11g00599 Chy-Chr11:6948159 4.90E-101 transposed
Chy04g01118 Chy-Chr4:17269937 Chy11g00599 Chy-Chr11:6948159 2.49E-20 transposed
Chy01g00419 Chy-Chr1:2952449 Chy11g00599 Chy-Chr11:6948159 0 wgd
Chy11g00599 Chy-Chr11:6948159 Chy02g00386 Chy-Chr2:2460284 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18694 PF01852 START 6.00E-60 CL0209 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00599 K09338 - csv:101214763 1488.78