Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g00625 | ATGGACTGGACTAGAGGCCACGTCATCGGCCACGGCTCCTCCGCCACCGTCTTCCTCGCTACCGATTCTCCCTCTCGCGATGTCTTCGCCGTCAAAACTGCCCAGCTTTCGCACTCCCAATCTCTACGAAAGGAGCAACAGTTTCTTTCTTCTTTAGCCTCTCCTTACATAGTTTCTTATAGAGGCTTTGAAGTCCGTAGAGAACAGAGTGGGGTCATGATGTTCAATCTTTTCATGGAGTATTTACCCAACGGCTCACTCGCCGACACAATTCGCCGCCGTGGAGGACAACGGCTCGACGAGGCAACCATTGTAGTCTACACACGGCAGTTACTAATGGGTCTACAATACATTCATTCCAAAGGCATAGTACATTGCGACATTAAAGCCCGAAACATTTTGATTGGTCTAGACGGCGAGGCTAAATTGGCTGATTTCGGTTGCGCCAAGTGGGCAACAAGCCAAACGGATCCAATCGGCGGCACGCCGTTGTTCATGGCGCCGGAAGTAGCTCGTGGTGAACACCAAGGTTTCCCCTCCGACATTTGGTCAATTGGGTGTACAATTATCGAAATGGCCACCGGTGGCGGCTCGCCTTGGCCAAAAACAACCGACGACACCGACCCGATTTCTGCCCTGTATCGAATTGGTTATTCCGGGGAGTCGCCGGAAATTCCATGTTATTTATCTGAAGAAGCAAAGGATTTCTTGGAGAAGTGTTTGAAAAGGAATCCAAGTGAGAGATGGACGGCCAATGAGTTAATGAATCATCCATTGTTAAGGAAGTTGAATTGTAGAAGGGCATGGAAAACGGAGGAAGTTCATTCAGAATCGCCGACGAGTATTCTAGAACAGGGGATATGGAGATCGATTGAAGAAAGTGAAATTAGAGGAAGGGAATTGGTAAGATCCAATGGTTGGGAGGCAGCGGCAGCTGAGGAGCAGATCCGACGGCTGTGGATGATTTCAGGGGAGCCCAGATGGGAAGAGGATGAGAATTGGATTACAATTAGAAGAAAAGAAGAAGGGGAGAAGAATGGTGGGGCAGATGAGTCAGAAGTGAAAAAATGTAGTAATTATTCTAACAATAATAATAATAATAGTAATTGGGGTGACAAAAAGAGAGGTAGTGGAGGGAAAGAGTGGTTGGAAATGGAATTAGGGAATATTAGTTGTAGAATTAGTAGGAATCATTTGGGAGACTATAGTTGTAGGAATATTATTAGTCTTGTAAATAATAATTATCCTTTATCTTTTCATACACTTACACCTATATTTCTTCCTTTAATGCCAACTATATTATGA | 1305 | 45.21 | MDWTRGHVIGHGSSATVFLATDSPSRDVFAVKTAQLSHSQSLRKEQQFLSSLASPYIVSYRGFEVRREQSGVMMFNLFMEYLPNGSLADTIRRRGGQRLDEATIVVYTRQLLMGLQYIHSKGIVHCDIKARNILIGLDGEAKLADFGCAKWATSQTDPIGGTPLFMAPEVARGEHQGFPSDIWSIGCTIIEMATGGGSPWPKTTDDTDPISALYRIGYSGESPEIPCYLSEEAKDFLEKCLKRNPSERWTANELMNHPLLRKLNCRRAWKTEEVHSESPTSILEQGIWRSIEESEIRGRELVRSNGWEAAAAEEQIRRLWMISGEPRWEEDENWITIRRKEEGEKNGGADESEVKKCSNYSNNNNNNSNWGDKKRGSGGKEWLEMELGNISCRISRNHLGDYSCRNIISLVNNNYPLSFHTLTPIFLPLMPTIL* | 435 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7372794 | 7374098 | - | Chy11G192050.1 | Chy11g00625 | 236386 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g00625 | 434 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 123 | 135 | IPR008271 | GO:0004672|GO:0006468 | |
Chy11g00625 | 434 | ProSitePatterns | Protein kinases ATP-binding region signature. | 9 | 32 | IPR017441 | GO:0005524 | |
Chy11g00625 | 434 | Gene3D | Transferase(Phosphotransferase) domain 1 | 78 | 287 | - | - | |
Chy11g00625 | 434 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 18 | 2 | 352 | - | - | |
Chy11g00625 | 434 | Pfam | Protein kinase domain | 5 | 259 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g00625 | 434 | SMART | serkin_6 | 3 | 260 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g00625 | 434 | PRINTS | Tyrosine kinase catalytic domain signature | 117 | 135 | IPR001245 | GO:0004672|GO:0006468 | |
Chy11g00625 | 434 | PRINTS | Tyrosine kinase catalytic domain signature | 79 | 92 | IPR001245 | GO:0004672|GO:0006468 | |
Chy11g00625 | 434 | PRINTS | Tyrosine kinase catalytic domain signature | 180 | 202 | IPR001245 | GO:0004672|GO:0006468 | |
Chy11g00625 | 434 | MobiDBLite | consensus disorder prediction | 339 | 375 | - | - | |
Chy11g00625 | 434 | ProSiteProfiles | Protein kinase domain profile. | 3 | 260 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g00625 | 434 | PANTHER | CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED | 2 | 352 | - | - | |
Chy11g00625 | 434 | MobiDBLite | consensus disorder prediction | 355 | 373 | - | - | |
Chy11g00625 | 434 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 77 | - | - | |
Chy11g00625 | 434 | CDD | STKc_MAPKKK | 2 | 260 | - | - | |
Chy11g00625 | 434 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 270 | IPR011009 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy01g00438 | Chy11g00625 | CCT | |
Chy01g00438 | Chy11g00625 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g00968 | Chy-Chr1:9775777 | Chy11g00625 | Chy-Chr11:7372794 | 4.90E-98 | dispersed | |
Chy02g00907 | Chy-Chr2:5896049 | Chy11g00625 | Chy-Chr11:7372794 | 8.50E-71 | dispersed | |
Chy11g00219 | Chy-Chr11:2047451 | Chy11g00625 | Chy-Chr11:7372794 | 6.81E-64 | dispersed | |
Chy11g00625 | Chy-Chr11:7372794 | Chy05g00223 | Chy-Chr5:1844743 | 3.07E-53 | dispersed | |
Chy12g00308 | Chy-Chr12:3358260 | Chy11g00625 | Chy-Chr11:7372794 | 1.35E-64 | transposed | |
Chy01g00438 | Chy-Chr1:3150118 | Chy11g00625 | Chy-Chr11:7372794 | 8.37E-123 | wgd | |
Chy11g00625 | Chy-Chr11:7372794 | Chy02g00415 | Chy-Chr2:2599132 | 3.67E-103 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71544 | PF00069 | Pkinase | 7.20E-57 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g00625 | K20716 | - | csv:101208274 | 832.402 |