Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00625 ATGGACTGGACTAGAGGCCACGTCATCGGCCACGGCTCCTCCGCCACCGTCTTCCTCGCTACCGATTCTCCCTCTCGCGATGTCTTCGCCGTCAAAACTGCCCAGCTTTCGCACTCCCAATCTCTACGAAAGGAGCAACAGTTTCTTTCTTCTTTAGCCTCTCCTTACATAGTTTCTTATAGAGGCTTTGAAGTCCGTAGAGAACAGAGTGGGGTCATGATGTTCAATCTTTTCATGGAGTATTTACCCAACGGCTCACTCGCCGACACAATTCGCCGCCGTGGAGGACAACGGCTCGACGAGGCAACCATTGTAGTCTACACACGGCAGTTACTAATGGGTCTACAATACATTCATTCCAAAGGCATAGTACATTGCGACATTAAAGCCCGAAACATTTTGATTGGTCTAGACGGCGAGGCTAAATTGGCTGATTTCGGTTGCGCCAAGTGGGCAACAAGCCAAACGGATCCAATCGGCGGCACGCCGTTGTTCATGGCGCCGGAAGTAGCTCGTGGTGAACACCAAGGTTTCCCCTCCGACATTTGGTCAATTGGGTGTACAATTATCGAAATGGCCACCGGTGGCGGCTCGCCTTGGCCAAAAACAACCGACGACACCGACCCGATTTCTGCCCTGTATCGAATTGGTTATTCCGGGGAGTCGCCGGAAATTCCATGTTATTTATCTGAAGAAGCAAAGGATTTCTTGGAGAAGTGTTTGAAAAGGAATCCAAGTGAGAGATGGACGGCCAATGAGTTAATGAATCATCCATTGTTAAGGAAGTTGAATTGTAGAAGGGCATGGAAAACGGAGGAAGTTCATTCAGAATCGCCGACGAGTATTCTAGAACAGGGGATATGGAGATCGATTGAAGAAAGTGAAATTAGAGGAAGGGAATTGGTAAGATCCAATGGTTGGGAGGCAGCGGCAGCTGAGGAGCAGATCCGACGGCTGTGGATGATTTCAGGGGAGCCCAGATGGGAAGAGGATGAGAATTGGATTACAATTAGAAGAAAAGAAGAAGGGGAGAAGAATGGTGGGGCAGATGAGTCAGAAGTGAAAAAATGTAGTAATTATTCTAACAATAATAATAATAATAGTAATTGGGGTGACAAAAAGAGAGGTAGTGGAGGGAAAGAGTGGTTGGAAATGGAATTAGGGAATATTAGTTGTAGAATTAGTAGGAATCATTTGGGAGACTATAGTTGTAGGAATATTATTAGTCTTGTAAATAATAATTATCCTTTATCTTTTCATACACTTACACCTATATTTCTTCCTTTAATGCCAACTATATTATGA 1305 45.21 MDWTRGHVIGHGSSATVFLATDSPSRDVFAVKTAQLSHSQSLRKEQQFLSSLASPYIVSYRGFEVRREQSGVMMFNLFMEYLPNGSLADTIRRRGGQRLDEATIVVYTRQLLMGLQYIHSKGIVHCDIKARNILIGLDGEAKLADFGCAKWATSQTDPIGGTPLFMAPEVARGEHQGFPSDIWSIGCTIIEMATGGGSPWPKTTDDTDPISALYRIGYSGESPEIPCYLSEEAKDFLEKCLKRNPSERWTANELMNHPLLRKLNCRRAWKTEEVHSESPTSILEQGIWRSIEESEIRGRELVRSNGWEAAAAEEQIRRLWMISGEPRWEEDENWITIRRKEEGEKNGGADESEVKKCSNYSNNNNNNSNWGDKKRGSGGKEWLEMELGNISCRISRNHLGDYSCRNIISLVNNNYPLSFHTLTPIFLPLMPTIL* 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7372794 7374098 - Chy11G192050.1 Chy11g00625 236386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00625 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Chy11g00625 434 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Chy11g00625 434 Gene3D Transferase(Phosphotransferase) domain 1 78 287 - -
Chy11g00625 434 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 18 2 352 - -
Chy11g00625 434 Pfam Protein kinase domain 5 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g00625 434 SMART serkin_6 3 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g00625 434 PRINTS Tyrosine kinase catalytic domain signature 117 135 IPR001245 GO:0004672|GO:0006468
Chy11g00625 434 PRINTS Tyrosine kinase catalytic domain signature 79 92 IPR001245 GO:0004672|GO:0006468
Chy11g00625 434 PRINTS Tyrosine kinase catalytic domain signature 180 202 IPR001245 GO:0004672|GO:0006468
Chy11g00625 434 MobiDBLite consensus disorder prediction 339 375 - -
Chy11g00625 434 ProSiteProfiles Protein kinase domain profile. 3 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g00625 434 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 352 - -
Chy11g00625 434 MobiDBLite consensus disorder prediction 355 373 - -
Chy11g00625 434 Gene3D Phosphorylase Kinase; domain 1 1 77 - -
Chy11g00625 434 CDD STKc_MAPKKK 2 260 - -
Chy11g00625 434 SUPERFAMILY Protein kinase-like (PK-like) 2 270 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy01g00438 Chy11g00625 CCT
Chy01g00438 Chy11g00625 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00968 Chy-Chr1:9775777 Chy11g00625 Chy-Chr11:7372794 4.90E-98 dispersed
Chy02g00907 Chy-Chr2:5896049 Chy11g00625 Chy-Chr11:7372794 8.50E-71 dispersed
Chy11g00219 Chy-Chr11:2047451 Chy11g00625 Chy-Chr11:7372794 6.81E-64 dispersed
Chy11g00625 Chy-Chr11:7372794 Chy05g00223 Chy-Chr5:1844743 3.07E-53 dispersed
Chy12g00308 Chy-Chr12:3358260 Chy11g00625 Chy-Chr11:7372794 1.35E-64 transposed
Chy01g00438 Chy-Chr1:3150118 Chy11g00625 Chy-Chr11:7372794 8.37E-123 wgd
Chy11g00625 Chy-Chr11:7372794 Chy02g00415 Chy-Chr2:2599132 3.67E-103 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71544 PF00069 Pkinase 7.20E-57 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00625 K20716 - csv:101208274 832.402