Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00653 ATGCCAAATTTGCCTCCTAAAATCCCAAACTTGACCACTCCACACCACTTCCCTCAACACAACAATGATTTCCTTTGCTTCTCTTCCTCTAAACAGAGTTTCCACCGCCGCTCTGTCAGCGACTCGATAGCCTTCCTCGACTCACCAACAATGATGAGTCAAAGCTTCTTAGGTTCGGCTGCATCGATATCCAACAGTAATAACGCATTTGATGGGTTCGATGAGGAGCAATTTAGATCGATGTTGAGTGATGAAATTCACTCTAATAATGAAGATGATGAACCCACTTCTTCAGATCACAACAGCAATGAGAAGTCAGAAGGGACAACAAATGATGATCCAAAGCATTTGATTAGAAATGAGCCTAAAGAAGAGGTTGAAAGTCGCCAATGGGAAGACAATGTGGTTACAACGAACATCTCTAATGATCTAGTCACTGATCCCAAAAGAGTCAAGAGAATATTGGCAAATAGACAATCTGCACGAAGATCAAGGGTCAAGAAATTACAATACATATCAGAATTGGAAAGAAGTGTGACTACATTACAGGCCGAAGTTTCAATGTTATCACCAAGAGTTGCATTTCTAGACCAACAGCGACTACTTCTAAATGTGGACAATAGTGCTTTGAAGCAAAGAATCGCCACTCTCTCCCAAGACAAGATTTTCAAAGATGCTCATGAAGAAGCATTGAAGAGAGAAATAGAGAGATTAGGGCAATTGTATCATCGACAACAAAAGAGTAAGAGAATGGAATGTAACGAATCATCTCCAACAGAACCATCCACATCTTCTGGAGATCAAAAGCATAAACTTCTTTATGTTTGA 828 40.1 MPNLPPKIPNLTTPHHFPQHNNDFLCFSSSKQSFHRRSVSDSIAFLDSPTMMSQSFLGSAASISNSNNAFDGFDEEQFRSMLSDEIHSNNEDDEPTSSDHNSNEKSEGTTNDDPKHLIRNEPKEEVESRQWEDNVVTTNISNDLVTDPKRVKRILANRQSARRSRVKKLQYISELERSVTTLQAEVSMLSPRVAFLDQQRLLLNVDNSALKQRIATLSQDKIFKDAHEEALKREIERLGQLYHRQQKSKRMECNESSPTEPSTSSGDQKHKLLYV* 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7905677 7907660 - Chy11G192330.1 Chy11g00653 236414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00653 275 MobiDBLite consensus disorder prediction 243 275 - -
Chy11g00653 275 Gene3D - 148 221 - -
Chy11g00653 275 SUPERFAMILY Leucine zipper domain 149 203 IPR046347 GO:0003700|GO:0006355
Chy11g00653 275 PANTHER BASIC LEUCINE ZIPPER 34 12 264 - -
Chy11g00653 275 PANTHER BASIC LEUCINE ZIPPER 61-LIKE 12 264 - -
Chy11g00653 275 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 147 199 IPR004827 GO:0003700|GO:0006355
Chy11g00653 275 CDD bZIP_plant_RF2 150 200 IPR044759 GO:0003700|GO:0006355
Chy11g00653 275 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 152 167 IPR004827 GO:0003700|GO:0006355
Chy11g00653 275 Pfam bZIP transcription factor 149 195 IPR004827 GO:0003700|GO:0006355
Chy11g00653 275 SMART brlzneu 145 209 IPR004827 GO:0003700|GO:0006355
Chy11g00653 275 MobiDBLite consensus disorder prediction 255 269 - -
Chy11g00653 275 MobiDBLite consensus disorder prediction 87 130 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy01g00455 Chy11g00653 CCT
Chy01g00455 Chy11g00653 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00043 Chy-Chr7:404691 Chy11g00653 Chy-Chr11:7905677 3.05E-71 dispersed
Chy01g00730 Chy-Chr1:5316807 Chy11g00653 Chy-Chr11:7905677 7.62E-20 transposed
Chy01g01284 Chy-Chr1:16197847 Chy11g00653 Chy-Chr11:7905677 7.59E-21 transposed
Chy03g00519 Chy-Chr3:7178412 Chy11g00653 Chy-Chr11:7905677 7.72E-18 transposed
Chy10g00314 Chy-Chr10:7869775 Chy11g00653 Chy-Chr11:7905677 3.61E-20 transposed
Chy10g00753 Chy-Chr10:13719995 Chy11g00653 Chy-Chr11:7905677 4.09E-22 transposed
Chy10g01225 Chy-Chr10:16915468 Chy11g00653 Chy-Chr11:7905677 1.06E-17 transposed
Chy11g01164 Chy-Chr11:17745019 Chy11g00653 Chy-Chr11:7905677 1.15E-20 transposed
Chy12g00320 Chy-Chr12:3448310 Chy11g00653 Chy-Chr11:7905677 7.15E-06 transposed
Chy01g00455 Chy-Chr1:3295151 Chy11g00653 Chy-Chr11:7905677 8.80E-70 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18697 PF00170 bZIP_1 1.40E-09 CL0018 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00653 - - csv:105434687 512.686