Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00658 ATGCCGAAGGGTTTGAAGAGTAAATGTCAATCTACTTCTCATCAGCTTTTGAAGGAAAAAGCAAAGAACCGTGTTAATGACCTTCAAGGGATATTTACTAATCTTCAAAATGCAAGGAAGGAGAGTCGTACTACTGACGTTGCTGTCTTGGAGGAGCAAGTCCATCAGATGCTCAGGGAGTGGAATGCTGAGCTTAATGAACCTTCACCTGCATCTTCATTTGTTGAGGGTAGTCTTGGATCATTCTCACAAGAGTTAGCCCGTCTTCTTGAGCATTGTGATGAGCAAGATGATGCAACTAGTACATTGGCTGAACCAAAGGCTGAACCTGAACTCCACTGCGTTCTTGGCAGCAATCCGTCAAATTTCGTACAGGATGGTTTTTGTATTTCAGAGCTCCAACACGAAAGTTTTTTCGGATTTGAGGAGTGCAAAGTGTCTCCTTTAGATCTTCAGAATTATTCATTTTACAAATCGGACATGGCTACTCAGTCTAATTGTCAAAGTTTCAAATTAGATCAAAACTTAGAGCAGACCACCGTGGTCAGTAAGGATGATATGTCTACTTTGAATTGCCATATATTGAATTCACAACCAGAGTTTGACTATGGGGTTCTTATTGGGGCATCGGATGTGGGAGACTTTAGTCGGGACACAAACCCCAGTATTCTCCCAAATATTGCACCCCAACCATCTGCTTTTATGGGCCCGATATGTGCTCTCTGGGATTGTTTCAGACCTGCTCAAGGATCCAAATGGTGTCAGGACTATTGCAGTAGCTGTCATTCTGTTCTTGCTATAAACGAAGGCCTTCCTGGAATGATTCCAATATTGCGTCCTGGGGGAATTGGGTTTAAGGATGGTCCTTTGTTTGCTGCTCTTCAGGCAAAGACACAAGCCAAAGAAGTTGGAATACCCATATGTGATGGTGCTGCAACAAGGAAATCTCCATGGAATGCTCCGGAGCTTTTTGATATTACATTTCTTGAGGGGGAGACAATTAGGGAATGGCTCTACTTCGATAAGCCTAGACGAGCCTTTGAGAGTGGCAATCGAAAGCAAAGGTCATTGCCAGATTATAGTGGCCGTGGTTGGCATGAATCAAGAAAGCTAGTGATGAAGGAGTTTGGTGGTCAAAAGAAGTCTTATTACATGGATCCACAGCCATCAAGCACTCTTGAATGGCATTTGTACGAGTATGATATCACCAATTATGATTCATTCGCATTATATAGGCTGGAACTCAAACATGCTGATACAAAAAAGAGTCCAAAGGGAAAATTGGCAGCGGATCCTCTGGCTGATCTTCAGAAGAAGATGGGAAGGCTTACTGCAGAGGGCCCTGTTGAGCTTGGACAACAAGTTAAAGGCAAGATGGCGATGAAGACAAATAATTAA 1398 42.99 MPKGLKSKCQSTSHQLLKEKAKNRVNDLQGIFTNLQNARKESRTTDVAVLEEQVHQMLREWNAELNEPSPASSFVEGSLGSFSQELARLLEHCDEQDDATSTLAEPKAEPELHCVLGSNPSNFVQDGFCISELQHESFFGFEECKVSPLDLQNYSFYKSDMATQSNCQSFKLDQNLEQTTVVSKDDMSTLNCHILNSQPEFDYGVLIGASDVGDFSRDTNPSILPNIAPQPSAFMGPICALWDCFRPAQGSKWCQDYCSSCHSVLAINEGLPGMIPILRPGGIGFKDGPLFAALQAKTQAKEVGIPICDGAATRKSPWNAPELFDITFLEGETIREWLYFDKPRRAFESGNRKQRSLPDYSGRGWHESRKLVMKEFGGQKKSYYMDPQPSSTLEWHLYEYDITNYDSFALYRLELKHADTKKSPKGKLAADPLADLQKKMGRLTAEGPVELGQQVKGKMAMKTNN* 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8023177 8025632 - Chy11G192380.1 Chy11g00658 236419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00658 465 PANTHER TRANSCRIPTION FACTOR VOZ2 1 463 - -
Chy11g00658 465 Coils Coil 18 38 - -
Chy11g00658 465 PANTHER TRANSCRIPTION FACTOR VOZ1 1 463 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00633 Chy-Chr4:7220458 Chy11g00658 Chy-Chr11:8023177 2.87E-08 transposed
Chy04g01055 Chy-Chr4:15651683 Chy11g00658 Chy-Chr11:8023177 2.27E-39 transposed
Chy04g01061 Chy-Chr4:15783313 Chy11g00658 Chy-Chr11:8023177 3.09E-17 transposed
Chy11g00658 Chy-Chr11:8023177 Chy02g00265 Chy-Chr2:1718439 1.51E-42 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18699 None None None None Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00658 - - csv:101211467 942.184