Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00700 ATGCAAGCTTCTCAGCTTCATAGAGGTTCACATATGGCAAAGAGGTTATGTTATCAGCCACTTCAGGAAGTGGATGCCTACTACTTCTCCCAATTTCAATCTTTAGGTCGCCAATTATATTCCAATGTTGGCAACCAAAGAGGTCACTTCAATGTTCAAGACATCGGTGATCGGTACTGCACTCTGGAGTCGTCCTCAGGAAGCCACGGCTATGCAACTCACAACTCGACCTCAACTGTCACTTTCTCACCAAATGGGAGTCCAGTGTCGCAACAGTATTCTCGTTCAAATCCTTCTGATCAGCATAATTCCCCAGACTATACGTATGGTTCCTCAGTAAGTGGATCCAGTATAACGGATGATATTAGTGATTTTAGGCACAAACTACTGGAATTGGAAACTGTGATGCTTGGCCCTGATTCTGATGTTATATATAGTTTTGATAGTATCTACCAGGAGGGGATGGACAATCCAGAGATGGGAACTTGGGGACAAGTGATGGATGCTATTACTAAAGGAAACTTGAAAAAGATCCTAATAGCTTGTGCTAAAGCTGTATCAGATAATGATGCATTGATGGCACAATGGCTTATGGAGGAGCTGCGCAAGATGGTGTCAGTTTGTGGCGAACCGATGCAGAGGTTGGGAGCGTATATGCTGGAGGGGTTGGTTGCACGGTTGGCTTCCTCAGGTAGTTGCATCTATAAATCTTTGAGATGCAAGGAACCAGCAAGAGCCGAGCTCCTCTCGTATATGCACCTTCTTTATGAGGTTTGCCCATACTTCAAATTTGGATACATGTCAGCAAATGGTGCCATTGCAGAAGCCATGAAAGATGAAGATAGAGTTCACATCATTGATTTCCAAATTTCTCAGGGTACTCAGTGGGTCACTTTGATTCAAGCATTTGCAGGTAGGCCTGGTGGGCCACCTCACATTCGTATAACTGGTATAGATGATCCTGCATCAGCTTATGCTCGTGGAGGTGGCCTAGATATTGTTGGGAAGAGACTTTCCAAGTTAGCAAAGTTATTTAACGTGCCACTTGAGTTTCACTCTGCTACTATTTCTGGCTGCGATGTTCAGCAAAACAATCTCGGCATTCGACGAGGGGAGGCTTTAGCAGTGAATTTTGCATTCATGCTACACCATATGCCAGATGAGAGCGTAAGCACCGAAAATCATCGAGATAGGCTACTGAGGCTGGTTAAAGGTCTGTCTCCAAAGGTCGTGACACTTGTTGAACAAGAATCCAACACAAACACGGCTGCCTTCTTTCCCCGGTTCGTCGAGACACTAAATTACTACAATGCCATGTTTGAATCAATCGATGTTACTCTTCCAAGACAGCACAAGGAGCGAATTAACATCGAGCAGCATTGTCTAGCCAGGGAAGTTGTCAACATACTAGCATGTGAAGGAGCAGAGAGAGTGGAACGACACGAGCTACTCGGAAAGTGGAGACTGCGATTTGGATTGGCAGGATTTACGCCTTACCCATTAAGCTCGTTGGTGAATGCTACCATCAAAACGTTATTAGATAACTATTCTAACAGGTATAGACTTGAAGAAAGAGAAGGGGCTTTGTATTTAGGGTGGATGGATAGGGATTTGGTTGCTTCCTGTGCATGGAAGTAA 1638 44.51 MQASQLHRGSHMAKRLCYQPLQEVDAYYFSQFQSLGRQLYSNVGNQRGHFNVQDIGDRYCTLESSSGSHGYATHNSTSTVTFSPNGSPVSQQYSRSNPSDQHNSPDYTYGSSVSGSSITDDISDFRHKLLELETVMLGPDSDVIYSFDSIYQEGMDNPEMGTWGQVMDAITKGNLKKILIACAKAVSDNDALMAQWLMEELRKMVSVCGEPMQRLGAYMLEGLVARLASSGSCIYKSLRCKEPARAELLSYMHLLYEVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWVTLIQAFAGRPGGPPHIRITGIDDPASAYARGGGLDIVGKRLSKLAKLFNVPLEFHSATISGCDVQQNNLGIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLSPKVVTLVEQESNTNTAAFFPRFVETLNYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRLRFGLAGFTPYPLSSLVNATIKTLLDNYSNRYRLEEREGALYLGWMDRDLVASCAWK* 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8882365 8884002 - Chy11G192800.1 Chy11g00700 236461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00700 545 Pfam GRAS domain family 175 545 IPR005202 -
Chy11g00700 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 18 545 IPR005202 -
Chy11g00700 545 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 18 545 - -
Chy11g00700 545 MobiDBLite consensus disorder prediction 66 115 - -
Chy11g00700 545 ProSiteProfiles GRAS family profile. 166 545 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01269 Chy-Chr1:15817039 Chy11g00700 Chy-Chr11:8882365 1.49E-150 dispersed
Chy02g00456 Chy-Chr2:2851400 Chy11g00700 Chy-Chr11:8882365 0 dispersed
Chy06g01877 Chy-Chr6:22636667 Chy11g00700 Chy-Chr11:8882365 0 dispersed
Chy09g01383 Chy-Chr9:15601648 Chy11g00700 Chy-Chr11:8882365 3.65E-77 dispersed
Chy11g00700 Chy-Chr11:8882365 Chy12g00215 Chy-Chr12:2538666 3.47E-66 dispersed
Chy11g01219 Chy-Chr11:18370398 Chy11g00700 Chy-Chr11:8882365 4.66E-65 dispersed
Chy11g00700 Chy-Chr11:8882365 Chy04g02153 Chy-Chr4:26695033 1.46E-72 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18704 PF03514 GRAS 3.60E-135 CL0063 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00700 - - csv:101221914 1081.63