Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00731 ATGGCAGAGTGTGGCAGAAGAGACAGAGTTAACCATGGTTACAGAACGTGGGTTAGTTTCTCCTTCAGGACCGGAGAGGTTTTGTTGCCGGATTTTCTGTCGGAATTTGCAAATTTAGAGTTGGCTTTCCTTGGATTCCTTTACATGGTTTTGGATTTGATTCGTGTGGAATTGATTTTCCCCTGCATCTTTTGTGTTCTTGTTCTTGATCAATCTGTCATAGTTTCTGGGTTGTTTCTGAGTAAATCTATTGCCCTAATCTTGATGTTTTATAATGGAAGCTCTTCGTATATTCTGTTTAGTGTCCTTCCTGCACCTTCTGAAGGAGTACTAGGCGTGATCCTTGTAAATACAGCCTTATCCATTTCTATCTTCAAAGGCATAGTTCGGTCAATCCTCCATGTTGTTGGCATCCATCTCTCCTCGTCCTCACCTACATTACCTTCATCACCGGATTCCATTGAGAATGCTCCTGAATCCATAGAGTTCCATCTTAACCCCAATGGAAGTTACATTGAAGAGTTCCGCCGTCGAATCCCAGCAATTCTTTTCGACAAAGTACGAAGCTGCAAATTGCTTGAACACGATTGCTCAGTTTGCCTAACCCAATTTGAACCTGAATCAGAGATAAATCATTTATCTTGTGGCCATCTTTTCCATAGAGTGTGCTTGGAGAAGTGGTTGGACTACTGGAACCTTACATGCCCACTGTGTCGAACTCCATTAATGCCAGAAGAAGACACAGCTTCCTGCTTTTGGTGA 762 42.52 MAECGRRDRVNHGYRTWVSFSFRTGEVLLPDFLSEFANLELAFLGFLYMVLDLIRVELIFPCIFCVLVLDQSVIVSGLFLSKSIALILMFYNGSSSYILFSVLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLSSSSPTLPSSPDSIENAPESIEFHLNPNGSYIEEFRRRIPAILFDKVRSCKLLEHDCSVCLTQFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPLMPEEDTASCFW* 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9777923 9779632 - Chy11G193110.1 Chy11g00731 236492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00731 253 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED 101 253 - -
Chy11g00731 253 ProSiteProfiles Zinc finger RING-type profile. 197 239 IPR001841 -
Chy11g00731 253 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 164 244 IPR013083 -
Chy11g00731 253 SUPERFAMILY RING/U-box 187 245 - -
Chy11g00731 253 Pfam Ring finger domain 196 239 IPR001841 -
Chy11g00731 253 SMART ring_2 197 238 IPR001841 -
Chy11g00731 253 PANTHER - 101 253 IPR044249 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy01g00540 Chy11g00731 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00541 Chy-Chr1:3880291 Chy11g00731 Chy-Chr11:9777923 5.72E-22 dispersed
Chy11g00731 Chy-Chr11:9777923 Chy11g01659 Chy-Chr11:23054365 1.04E-12 dispersed
Chy01g00540 Chy-Chr1:3866744 Chy11g00731 Chy-Chr11:9777923 4.57E-61 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00731 K16285 - csv:101216645 304.293