Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00733 GTTTTGGAAAGAAATTCACCATATTTGGCAGTCCCTGAAGAAGCCACTCTTGGGTTTGAAAATTTGAACTCAGAGAGATCTGAAAAGTCAATTGCAAAGATGGGTTTCATGTGTGATTTTTGTGGGGATCAGAGGTCAATGGTTTACTGCCGATCTGATGCTGCATGTTTGTGCTTATCATGTGACCGTAATGTCCATTCTGCTAACGCCTTGTCGAGGCGTCATACGAGAACACTGTTGTGTGAAAGATGCCATTTGCAACCCTCCACAGTGAGGTGTATTGAAGAGAGAGTTTCTCTGTGTCAAAATTGTGATTGGACAGGTCATGGCACATCTACCCTTGCTTCATCATCACACAAGAGACAAACCATCAATTGTTACTCTGGTTGTCCATCGGCTGCTGAACTTTCATGCATCTGGTCCTTTGTGTTGGATGTTCCATCTGTAAATGATGCTTGTGAGAAAGAGTTGGGATTGATGAGCATTGCTGAAACTGACTTGACGGGCGCCTGGAGTCTTTCGGAGAACAACGCTGGTCAAAGAATGCCTGGGTCAACTGAAGCCAGTGATGTTTGTAGCAGGGAAAAGTCAAATGTTTTGGTTGGATCATCTTCACTCATTGGCTCTAGGCCTCACACTTCAGATCAGCCAGTTGAATTGGATAATGTGGCTTTACCCAAGTTTTGCTGTCCTGGAACAAAAGTTGCTGAAGTCTGCTGTGAGGATGACGACCTCTACAAGGAGTTTGATATGGATGAAATGGATTTGAATCTTGAAAATTATGAGGACCTATTTAGCATGAGCCTTAATCATTCTGAAGAGTTTTTTGAGAATGGTGGAATTGAAAGCTTTTTTGAGGCAAAAGGCCTGTCTTTTGAAGATTCAGTTTCCCACAGTGCAGTTGTTGCAGAGGGTTCTTCCATGGGAGTGGTCCAACAAATGCAGCCAGCTTACAGCAATGGTGCCTCTGCTGACTCAGTGATGAGTACTAAAACCGAACCGATTCTCTGTTTCAATTCAAGGCAAGCCCAGTCGGGTATGTCCTTTTCTGGCCTTACTGGTGAGAGTAGTGCTGGTGATCATCAAGACTGTGGAGCCTCTTCAATGCTTTTAATGGGTGAGCCTCCATGGTGTGCACCTGGCACTGAAAGTTCGTTCCCATCTACTGATCGCAATAGTGCCGTTCAGCGTTATAAGGAGAAAAAGAAGACGCGCAAGTTTGAGAAAACAGTGAGATACGCCACTCGCAAAGCGAGAGCTGATGTCAGAAGGCGTGTGAAGGGACGGTTTGTGAAGGCTGGAGAGGCGTATGATTATGACCCACTAAACCAGGCTAGAAGCTGCTGA 1347 45.14 VLERNSPYLAVPEEATLGFENLNSERSEKSIAKMGFMCDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHTRTLLCERCHLQPSTVRCIEERVSLCQNCDWTGHGTSTLASSSHKRQTINCYSGCPSAAELSCIWSFVLDVPSVNDACEKELGLMSIAETDLTGAWSLSENNAGQRMPGSTEASDVCSREKSNVLVGSSSLIGSRPHTSDQPVELDNVALPKFCCPGTKVAEVCCEDDDLYKEFDMDEMDLNLENYEDLFSMSLNHSEEFFENGGIESFFEAKGLSFEDSVSHSAVVAEGSSMGVVQQMQPAYSNGASADSVMSTKTEPILCFNSRQAQSGMSFSGLTGESSAGDHQDCGASSMLLMGEPPWCAPGTESSFPSTDRNSAVQRYKEKKKTRKFEKTVRYATRKARADVRRRVKGRFVKAGEAYDYDPLNQARSC* 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9809676 9816928 - Chy11G193130.1 Chy11g00733 236494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00733 448 CDD Bbox1_BBX-like 80 124 - -
Chy11g00733 448 SMART bboxneu5 33 80 IPR000315 GO:0008270
Chy11g00733 448 ProSiteProfiles CCT domain profile. 391 433 IPR010402 GO:0005515
Chy11g00733 448 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 9-LIKE 34 447 - -
Chy11g00733 448 ProSiteProfiles Zinc finger B-box type profile. 33 80 IPR000315 GO:0008270
Chy11g00733 448 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 34 447 - -
Chy11g00733 448 CDD Bbox1_BBX-like 38 80 - -
Chy11g00733 448 Pfam CCT motif 391 433 IPR010402 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy01g00545 Chy11g00733 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02191 Chy-Chr2:26080814 Chy11g00733 Chy-Chr11:9809676 2.86E-30 dispersed
Chy07g00776 Chy-Chr7:8917093 Chy11g00733 Chy-Chr11:9809676 1.66E-15 dispersed
Chy11g00590 Chy-Chr11:6716655 Chy11g00733 Chy-Chr11:9809676 6.43E-58 dispersed
Chy11g00733 Chy-Chr11:9809676 Chy02g02192 Chy-Chr2:26089518 2.56E-08 dispersed
Chy07g01493 Chy-Chr7:19217216 Chy11g00733 Chy-Chr11:9809676 1.89E-14 transposed
Chy10g01184 Chy-Chr10:16610334 Chy11g00733 Chy-Chr11:9809676 9.46E-08 transposed
Chy01g00545 Chy-Chr1:3890907 Chy11g00733 Chy-Chr11:9809676 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18707 PF06203 CCT 5.00E-16 CL0281 Chy TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00733 - - csv:101216401 824.698