Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g00733 | GTTTTGGAAAGAAATTCACCATATTTGGCAGTCCCTGAAGAAGCCACTCTTGGGTTTGAAAATTTGAACTCAGAGAGATCTGAAAAGTCAATTGCAAAGATGGGTTTCATGTGTGATTTTTGTGGGGATCAGAGGTCAATGGTTTACTGCCGATCTGATGCTGCATGTTTGTGCTTATCATGTGACCGTAATGTCCATTCTGCTAACGCCTTGTCGAGGCGTCATACGAGAACACTGTTGTGTGAAAGATGCCATTTGCAACCCTCCACAGTGAGGTGTATTGAAGAGAGAGTTTCTCTGTGTCAAAATTGTGATTGGACAGGTCATGGCACATCTACCCTTGCTTCATCATCACACAAGAGACAAACCATCAATTGTTACTCTGGTTGTCCATCGGCTGCTGAACTTTCATGCATCTGGTCCTTTGTGTTGGATGTTCCATCTGTAAATGATGCTTGTGAGAAAGAGTTGGGATTGATGAGCATTGCTGAAACTGACTTGACGGGCGCCTGGAGTCTTTCGGAGAACAACGCTGGTCAAAGAATGCCTGGGTCAACTGAAGCCAGTGATGTTTGTAGCAGGGAAAAGTCAAATGTTTTGGTTGGATCATCTTCACTCATTGGCTCTAGGCCTCACACTTCAGATCAGCCAGTTGAATTGGATAATGTGGCTTTACCCAAGTTTTGCTGTCCTGGAACAAAAGTTGCTGAAGTCTGCTGTGAGGATGACGACCTCTACAAGGAGTTTGATATGGATGAAATGGATTTGAATCTTGAAAATTATGAGGACCTATTTAGCATGAGCCTTAATCATTCTGAAGAGTTTTTTGAGAATGGTGGAATTGAAAGCTTTTTTGAGGCAAAAGGCCTGTCTTTTGAAGATTCAGTTTCCCACAGTGCAGTTGTTGCAGAGGGTTCTTCCATGGGAGTGGTCCAACAAATGCAGCCAGCTTACAGCAATGGTGCCTCTGCTGACTCAGTGATGAGTACTAAAACCGAACCGATTCTCTGTTTCAATTCAAGGCAAGCCCAGTCGGGTATGTCCTTTTCTGGCCTTACTGGTGAGAGTAGTGCTGGTGATCATCAAGACTGTGGAGCCTCTTCAATGCTTTTAATGGGTGAGCCTCCATGGTGTGCACCTGGCACTGAAAGTTCGTTCCCATCTACTGATCGCAATAGTGCCGTTCAGCGTTATAAGGAGAAAAAGAAGACGCGCAAGTTTGAGAAAACAGTGAGATACGCCACTCGCAAAGCGAGAGCTGATGTCAGAAGGCGTGTGAAGGGACGGTTTGTGAAGGCTGGAGAGGCGTATGATTATGACCCACTAAACCAGGCTAGAAGCTGCTGA | 1347 | 45.14 | VLERNSPYLAVPEEATLGFENLNSERSEKSIAKMGFMCDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHTRTLLCERCHLQPSTVRCIEERVSLCQNCDWTGHGTSTLASSSHKRQTINCYSGCPSAAELSCIWSFVLDVPSVNDACEKELGLMSIAETDLTGAWSLSENNAGQRMPGSTEASDVCSREKSNVLVGSSSLIGSRPHTSDQPVELDNVALPKFCCPGTKVAEVCCEDDDLYKEFDMDEMDLNLENYEDLFSMSLNHSEEFFENGGIESFFEAKGLSFEDSVSHSAVVAEGSSMGVVQQMQPAYSNGASADSVMSTKTEPILCFNSRQAQSGMSFSGLTGESSAGDHQDCGASSMLLMGEPPWCAPGTESSFPSTDRNSAVQRYKEKKKTRKFEKTVRYATRKARADVRRRVKGRFVKAGEAYDYDPLNQARSC* | 449 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9809676 | 9816928 | - | Chy11G193130.1 | Chy11g00733 | 236494 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g00733 | 448 | CDD | Bbox1_BBX-like | 80 | 124 | - | - | |
Chy11g00733 | 448 | SMART | bboxneu5 | 33 | 80 | IPR000315 | GO:0008270 | |
Chy11g00733 | 448 | ProSiteProfiles | CCT domain profile. | 391 | 433 | IPR010402 | GO:0005515 | |
Chy11g00733 | 448 | PANTHER | ZINC FINGER PROTEIN CONSTANS-LIKE 9-LIKE | 34 | 447 | - | - | |
Chy11g00733 | 448 | ProSiteProfiles | Zinc finger B-box type profile. | 33 | 80 | IPR000315 | GO:0008270 | |
Chy11g00733 | 448 | PANTHER | ZINC FINGER PROTEIN CONSTANS-LIKE 10 | 34 | 447 | - | - | |
Chy11g00733 | 448 | CDD | Bbox1_BBX-like | 38 | 80 | - | - | |
Chy11g00733 | 448 | Pfam | CCT motif | 391 | 433 | IPR010402 | GO:0005515 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy01g00545 | Chy11g00733 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g02191 | Chy-Chr2:26080814 | Chy11g00733 | Chy-Chr11:9809676 | 2.86E-30 | dispersed | |
Chy07g00776 | Chy-Chr7:8917093 | Chy11g00733 | Chy-Chr11:9809676 | 1.66E-15 | dispersed | |
Chy11g00590 | Chy-Chr11:6716655 | Chy11g00733 | Chy-Chr11:9809676 | 6.43E-58 | dispersed | |
Chy11g00733 | Chy-Chr11:9809676 | Chy02g02192 | Chy-Chr2:26089518 | 2.56E-08 | dispersed | |
Chy07g01493 | Chy-Chr7:19217216 | Chy11g00733 | Chy-Chr11:9809676 | 1.89E-14 | transposed | |
Chy10g01184 | Chy-Chr10:16610334 | Chy11g00733 | Chy-Chr11:9809676 | 9.46E-08 | transposed | |
Chy01g00545 | Chy-Chr1:3890907 | Chy11g00733 | Chy-Chr11:9809676 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18707 | PF06203 | CCT | 5.00E-16 | CL0281 | Chy | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g00733 | - | - | csv:101216401 | 824.698 |