Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00737 ATGGATGGATTTAGGAGTAACGACAACAAACAAGGCGTTGAAAGGCATTCCCGCACCGAGATGGGGTCGTTAGGCGAGAAAACTATACTGGAATTTGAAGATGAGAGCCTTGTTAGTCCAGTATCATTAACTAGAAAGAACTTTTCGATTGAGGGATCTATCCATAGTTCTTCATTGGGTGGTGGTTCGCAGAAACTTAGTTGCAGTAACATGAAGAACAGGGTATTTGGCAGCATTAAGATTGTCGTCTTCTCGGCTAAAATAAACCTTCTCATGCCTTTTGGCCCTCTAGCAATAATAGTCAGCACCTTGTCTGGTCACCATGGTTGGGTCTTCCTTTTAAGCTTGTTGGGGATCATACCTCTTGCTGAGCGTTTGGGCTATGCAACTGAACAACTGGCATGCTATACTGGAGCCACAGTTGGAGGTCTTCTGAATGCTACTTTTGGAAATGCCACAGAATTGATAATATCAATATATGCATTGCGAAGAGGAATGATACGTGTTGTTCAACAGTCATTATTAGGTTCAATTTTGTCTAATATGTTATTAGTACTTGGATGTGCATTCTTTGCTGGTGGAATTGTGGTTTCTAAGAGAGAGCAGGTCTTTAGTAAGGCAGCTGCTACAGTGAATTCTGGATTGCTGTTAATGGCGGTAATGGGACTTCTATTTCCTGCTGTCCTTCGTTCCACACACACAGAGTTGCACTCTGGAAAGTCAGAGCTGGCTCTTTCAAGATTTAGTAGCGGCATTATGTTGGTGGCATATGCTGCCTATCTTGTTTTTCAGTTGAAAAGTGATAAGAACTTATATCTCCCGGTCGATGAGGTGGATAATGAAGGGAGTTCTGATGATGAAGAAGCTCCTGAGATTTCTATGTGGGAATCAATTGTTTGGCTGTCTATCTTGACCATATGGATCTCCGTCCTCTCCGAATACTTGGTTAATGCAATCGAGGGGGCGTCGGTTGCAATGAACATACCTGTAGCATTCATCAGTGTTATTCTGTTACCTATTGTTGGGAATGCAGCAGAGCATGCAGGTGCCATCATGTTTGCCATGAAAGATAAGCTTGACATTTCTTTGGGTGTCGCGATAGGATCATCGACACAGATATCTATGTTTGGGATTCCCTTTTGTGTGGTCATTGGTTGGATCATGGGATGTCCTATGGACTTGAATTTTCAACTTTTTGAAACCGCCACGCTTTTCATCACGGTCATCGTCGTGGCCTTCATGTTGCAGGAGACAAAACCCGAAAACCTGGTGTATGAAAGGCAAGGGATGACTCAAGGTAGTGAATCTGCCTGCACTAGTACTCTCCAAAAGATGGGATCGACCAAAGCTCGAGGGATGCAAATGGTTTTATTCCATAGGGGAAAAATGGCATCTGGTGGTAGCTAG 1407 43.43 MDGFRSNDNKQGVERHSRTEMGSLGEKTILEFEDESLVSPVSLTRKNFSIEGSIHSSSLGGGSQKLSCSNMKNRVFGSIKIVVFSAKINLLMPFGPLAIIVSTLSGHHGWVFLLSLLGIIPLAERLGYATEQLACYTGATVGGLLNATFGNATELIISIYALRRGMIRVVQQSLLGSILSNMLLVLGCAFFAGGIVVSKREQVFSKAAATVNSGLLLMAVMGLLFPAVLRSTHTELHSGKSELALSRFSSGIMLVAYAAYLVFQLKSDKNLYLPVDEVDNEGSSDDEEAPEISMWESIVWLSILTIWISVLSEYLVNAIEGASVAMNIPVAFISVILLPIVGNAAEHAGAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGCPMDLNFQLFETATLFITVIVVAFMLQETKPENLVYERQGMTQGSESACTSTLQKMGSTKARGMQMVLFHRGKMASGGS* 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10002068 10007209 + Chy11G193170.1 Chy11g00737 236498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00737 468 Gene3D - 138 284 IPR044880 -
Chy11g00737 468 PANTHER VACUOLAR CATION/PROTON EXCHANGER 14 420 - -
Chy11g00737 468 MobiDBLite consensus disorder prediction 1 20 - -
Chy11g00737 468 TIGRFAM cax: calcium/proton exchanger 92 416 IPR004798 GO:0006816|GO:0015369
Chy11g00737 468 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 14 420 IPR004713 GO:0006812|GO:0008324|GO:0016021
Chy11g00737 468 TIGRFAM caca2: calcium/proton exchanger 78 418 - -
Chy11g00737 468 Pfam Sodium/calcium exchanger protein 110 265 IPR004837 GO:0016021|GO:0055085
Chy11g00737 468 Pfam Sodium/calcium exchanger protein 298 418 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00713 Chy-Chr4:8668034 Chy11g00737 Chy-Chr11:10002068 0 dispersed
Chy06g01915 Chy-Chr6:23065465 Chy11g00737 Chy-Chr11:10002068 4.02E-156 dispersed
Chy08g00634 Chy-Chr8:14250594 Chy11g00737 Chy-Chr11:10002068 5.67E-105 dispersed
Chy11g00737 Chy-Chr11:10002068 Chy04g02251 Chy-Chr4:27196737 1.96E-95 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00737 K07300 - csv:101215915 787.719