Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00746 ATGGAGGACAAGCAAGGTATGAGCAGTATCAAGCCTACCGACAAATGGATGGCATTTGACAGAGAATCGAACACAACAAACACTCCTGGAAATGAATCAAAAGAAGACAGAAAAAGCTTGCAATCTTCTTCCAGAGTATCAAAAGAAGCAAACATAGCAGAAAGGGCGGCGGAGTGGGGACTGGTGGTGGAGACAAACGTGGAGGAAGGTAGTTTCAAGGCCATTGTGGGGAGAGCATCTGGGGAAGGAGGGGGCAGCAAAAGATCATCAGAGAAAATCAGTGGTTCAGGAAGAACTTCAAGCTTTAGCAATGAAACCTCTGGAGTTTTTCCAAGAGTATCACAAGAGTTGAAGGATGCTTTAGCTTCTTTGGAACAGACATTTGTGGTCTCTGATGCCACAAAACCAGACTGCCCCATCGTGTATGCGAGCAGTGGCTTCTTTGGCATGACTGGTTATGCTTCAGAGGAGGTCATTGGAAGGAACTGCCGTTTTCTTCAGGGACCAGAGACAGACCAGAAAGAAGTCGACAAAATTCGATATGCAGTGAAAAACGGCAAAAGTTACTGCGGGAGGCTTTTGAACTACAAAAAGAATGGCACTCCTTTCTGGAATCTTCTGACAGTCACGCCTATCAAGGATGACAATGGCAACACTATCAAATTTATTGGAATGCAGGTAGAAGTAAGCAAGTACACAGAAGGCATAAATGATAAAGCATTACGACCGAATGGGTTGCCAAAGTCATTAATCCGCTATGATGCTCGCCAGAAGGAAAAGGCAATGGTTTCCATCACAGAGGTTGTTCAGACTGTGAAGAATCCTCGATCTCATGGTCGAGCTATGAGTCATGACACTACCAGAAAAAAAGAAGATTTTGAAAAGTTCAATCTTGACTATGTTCTTCCAAAACCAGTTGAAGCTGCAACTAATACACCGGGTAGACAAACTCCTCTACATGACCTCAAAGATGATGGGTTAGGCAAAAAACCTAGGCTCTCAAGTCGAGTTTCTTTAATGGGTTTCAAAGGGAAATCTCTAAGCAGTGCAAGGAAGCTTGAAGTAACAGACTTCGAACCAGAAATTTTGATGACCGATGAAATAGAACGGACTGATAGTTGGGATCGTGCTGAAAGAGAAAAGGATATTCGCCAAGGAATTGATTTAGCTACCACGTTGGAGCGAATTGAGAAAAATTTTGTTATTACTGATCCAAGGCTTCCTGATAATCCAATTATATTTGCGTCAGACAGCTTTCTTGAATTGACGGAATATACACGTGAAGAAATTTTGGGACGAAACTGTCGGTTCCTTCAAGGACCTGAAACAGACCAAGAAACTGTCTCAAAGATAAGGGATGCCATTAGGGAACAAAGAGAAATAACTGTTCAGTTGATCAACTATACCAAGACTGGTAAAAAGTTCTGGAACTTGTTCCACTTGCAACCAATGCGTGATGAAACGGGAGAGCTTCAGTATTTTATTGGTGTTCAACTAGATGGAAGTGGGCACGTGGAACCTTTGCAAAACCGTCTTTCTGAGACAGCAGAGCTGCAAAGTGCCAAGCTGGTTAAAGCCACTGCAGAGAATGTTGATGAGGCTGTCCGTGAACTTCCTGATGCCAACTTGAGACCAGAAGATCTGTGGGCAATTCATTCTCAACCAGTCTTCCCAAGGCCTCACAAGAAGCATAGTTCTTCTTGGACTGCTATACAGAAGATTATACGACGTGGTGAAAAAATTGGACTTCAACATTTTAAGCCAATTAAACCACTGGGTTGTGGAGACACTGGCAGTGTTCATCTGGTGGAACTTCTAGGTACAAGTGAACTTTATGCCTTGAAAGCAATGGAGAAATCAGCACTTTTGAATCGAAACAAGGTCCACAGAGCATGCATTGAAAGGCAAATCATTGCGCTTCTGGATCATCCTTTTCTTCCCACACTGTACACTTCATTTGAGACCCCGACACACGTTTGTTTGATAACAGACTTCTGCTCTGGTGGGGAATTATTCGCATTGCTTGATAAGCAACCAATGAAAATGTTTAAAGAAGATTCTGCAAGGTTCTATGCGGCAGAGGTTGTCATTGGCTTGGAATATCTTCACTGTCTAGGAATCATTTACCGGGATCTGAAGCCTGAAAATATTCTTCTCCAGAAAGATGGCCATGTTGCGCTTGCTGACTTCGATTTATCACTTGTGACATCCTGCAAGCCGCAGATTGTGAAGTATCCATTGCTACAAGGTAGAAGGAGATCTCGAAGTCAACCACCACCAGTATTTGTTGCAGAGCCGATCACACAATCAAATTCTTTTGTTGGAACTGAAGAGTATATTGCTCCTGAAATTATAACAGGGGAAGGCCACAGCAGCTCTATTGATTGGTGGGCTCTTGGTATATTGTTGTATGAGATGCTTTATGGTCGCACACCTTTCAGGGGAAAGAACAGGCAGAAGACTTTTGGTAACATCTTGCACAAAGATCTCACCTTTCCAAGTAGCATTCAGGTAAGTCTTGCAGCAAGGCAGTTGATCAATGCATTGCTACAAAGAGACCCTGCCAGACGTTTAGGATCAAGTACAGGTGCAAATGAAATCAAACAGCACCCGTTTTTCCAATCAATTAACTGGCCACTGATCCGGTGTATGGTCCCGCCACCATTAGAATCACCTCTTCAACTTACTGGAAAAGATGGAACAACCAAGGCTGTAAACTGGGAAGATGATGGTGTGCTTAGCTCAATGGATATGGATTATTTCTGA 2766 43.13 MEDKQGMSSIKPTDKWMAFDRESNTTNTPGNESKEDRKSLQSSSRVSKEANIAERAAEWGLVVETNVEEGSFKAIVGRASGEGGGSKRSSEKISGSGRTSSFSNETSGVFPRVSQELKDALASLEQTFVVSDATKPDCPIVYASSGFFGMTGYASEEVIGRNCRFLQGPETDQKEVDKIRYAVKNGKSYCGRLLNYKKNGTPFWNLLTVTPIKDDNGNTIKFIGMQVEVSKYTEGINDKALRPNGLPKSLIRYDARQKEKAMVSITEVVQTVKNPRSHGRAMSHDTTRKKEDFEKFNLDYVLPKPVEAATNTPGRQTPLHDLKDDGLGKKPRLSSRVSLMGFKGKSLSSARKLEVTDFEPEILMTDEIERTDSWDRAEREKDIRQGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQETVSKIRDAIREQREITVQLINYTKTGKKFWNLFHLQPMRDETGELQYFIGVQLDGSGHVEPLQNRLSETAELQSAKLVKATAENVDEAVRELPDANLRPEDLWAIHSQPVFPRPHKKHSSSWTAIQKIIRRGEKIGLQHFKPIKPLGCGDTGSVHLVELLGTSELYALKAMEKSALLNRNKVHRACIERQIIALLDHPFLPTLYTSFETPTHVCLITDFCSGGELFALLDKQPMKMFKEDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVALADFDLSLVTSCKPQIVKYPLLQGRRRSRSQPPPVFVAEPITQSNSFVGTEEYIAPEIITGEGHSSSIDWWALGILLYEMLYGRTPFRGKNRQKTFGNILHKDLTFPSSIQVSLAARQLINALLQRDPARRLGSSTGANEIKQHPFFQSINWPLIRCMVPPPLESPLQLTGKDGTTKAVNWEDDGVLSSMDMDYF* 922
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10264225 10277039 + Chy11G193260.1 Chy11g00746 236507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00746 921 SMART serkin_6 586 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g00746 921 MobiDBLite consensus disorder prediction 87 108 - -
Chy11g00746 921 Gene3D Transferase(Phosphotransferase) domain 1 670 890 - -
Chy11g00746 921 ProSitePatterns Serine/Threonine protein kinases active-site signature. 707 719 IPR008271 GO:0004672|GO:0006468
Chy11g00746 921 TIGRFAM sensory_box: PAS domain S-box protein 410 500 IPR000014 -
Chy11g00746 921 TIGRFAM sensory_box: PAS domain S-box protein 139 230 IPR000014 -
Chy11g00746 921 Pfam PAS domain 134 230 IPR000014 -
Chy11g00746 921 Pfam PAS domain 408 500 IPR000014 -
Chy11g00746 921 ProSiteProfiles PAS repeat profile. 385 458 IPR000014 -
Chy11g00746 921 SMART pas_2 387 456 IPR000014 -
Chy11g00746 921 SMART pas_2 115 184 IPR000014 -
Chy11g00746 921 Pfam Protein kinase domain 588 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g00746 921 ProSiteProfiles PAC domain profile. 459 513 IPR000700 -
Chy11g00746 921 ProSiteProfiles Protein kinase domain profile. 586 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g00746 921 MobiDBLite consensus disorder prediction 308 327 - -
Chy11g00746 921 SUPERFAMILY PYP-like sensor domain (PAS domain) 401 500 IPR035965 -
Chy11g00746 921 Gene3D Phosphorylase Kinase; domain 1 585 669 - -
Chy11g00746 921 CDD STKc_phototropin_like 584 892 - -
Chy11g00746 921 Gene3D PAS domain 374 538 - -
Chy11g00746 921 Gene3D PAS domain 127 296 - -
Chy11g00746 921 PANTHER FLIPPASE KINASE 1-RELATED 85 919 - -
Chy11g00746 921 CDD PAS 140 229 IPR000014 -
Chy11g00746 921 ProSiteProfiles PAC domain profile. 187 241 IPR000700 -
Chy11g00746 921 PANTHER BNAA02G07840D PROTEIN 85 919 - -
Chy11g00746 921 SUPERFAMILY Protein kinase-like (PK-like) 562 897 IPR011009 -
Chy11g00746 921 ProSiteProfiles PAS repeat profile. 113 186 IPR000014 -
Chy11g00746 921 CDD PAS 400 500 IPR000014 -
Chy11g00746 921 SUPERFAMILY PYP-like sensor domain (PAS domain) 134 226 IPR035965 -
Chy11g00746 921 MobiDBLite consensus disorder prediction 1 49 - -
Chy11g00746 921 MobiDBLite consensus disorder prediction 77 108 - -
Chy11g00746 921 SMART pac_2 462 504 IPR001610 -
Chy11g00746 921 SMART pac_2 190 232 IPR001610 -
Chy11g00746 921 ProSitePatterns Protein kinases ATP-binding region signature. 592 615 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g00746 Chy-Chr11:10264225 Chy04g01423 Chy-Chr4:20858972 1.79E-114 dispersed
Chy05g00898 Chy-Chr5:13375934 Chy11g00746 Chy-Chr11:10264225 1.09E-14 transposed
Chy10g00205 Chy-Chr10:5192758 Chy11g00746 Chy-Chr11:10264225 1.20E-14 transposed
Chy10g00974 Chy-Chr10:15229143 Chy11g00746 Chy-Chr11:10264225 2.43E-25 transposed
Chy11g01288 Chy-Chr11:19049688 Chy11g00746 Chy-Chr11:10264225 0 transposed
Chy01g00553 Chy-Chr1:3963768 Chy11g00746 Chy-Chr11:10264225 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71546 PF00069 Pkinase 1.00E-61 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00746 K20715 - csv:101215355 1798.48