Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00810 ATGGCCATGGCTATAGCTCATCACAGAGAGAGTAGTAGTGGGAGTATAACCAGGCATCTTGATAGTTCTGGGAAGTACGTTCGTTACACTTCCGAGCAGGTGGAGGCTCTTGAGAGAGTTTATGCCGAGTGCCCTAAGCCGAGTTCTCTTCGACGCCAGCAGCTTGTTCGGGATTGCCCAATTCTTTCCAACATAGAGCCCAAGCAGATCAAAGTCTGGTTTCAGAATCGCAGATGTAGGGAGAAGCAAAGGAAGGAGGCTTCTCGGCTGCAAACGGTTAACAGAAAACTGAATGCTATGAACAAGTTGTTAATGGAGGAGAATGATCGGTTGCAGAAACAAGTGTCGCAATTGGTGTGTGAAAATGGGTTTATGCGGCAGCAATTGCATACAGTGCCGGCAGCAGCAACTGCTGATGCAAGCTGTGATTCTGTGGTCACCACTCCTCAACCCTCTCGACGAGATGCTAATAACCCAGCTGGACTCCTCTCCATTGCAGAGGAGACCTTGGCAGAGTTCCTTTCAAAGGCTACAGGAACTGCTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCTGTTGGGATCTTTGCCATTTCACAAAGTTGTGGTGGAGTGGCAGCAAGAGCCTGTGGTCTTGTAAGTTTGGAGCCTTCGAAGATTGCAGAGATCCTTAAAGATCGTCCATCATGGTTTCGTGATTGTCGAAGCCTTGAGGTTTTTACCATGTTTCCAGCTGGAAATGGTGGGACAATTGAACTTGTTTACACGCAGGTGTATGCTCCAACTACCCTTGCTCCTGCACGTGATTTTTGGACTCTAAGATATACAATAACTTTAGAAAACGGGAGCCTTGTGGTTTGCGAGAGATCTCTCTCTGGTTCTGGTGCTGGTCCTAGCGAAGCAGCTGCTGCTCAGTTTGTGAGAGCTGAGATGCTCCCAAGTGGTTATCTGATTCGACCATGTGAGGGTGGTGGGTCTATCATACACATTGTTGATCACCTAAATCTTGAGGCATGGCATGTTCCTGAGGTGTTGCGGCCACTTTATGAATCGTCGAAAGTAGTGGCTCAGAAGATGACAATAGCAGCACTGCGGTACGTTAGGCAAATAGCCCAGGAGACAAGTGGTGAAGTGGTTTATGGTCTTGGCCGGCAGCCTGCTGTTTTGCGAACCTTTAGCCAACGATTGAGCAGGGGTTTTAATGATGCAGTGAATGGTTTTAATGACAATGGATGGTCGTTGATCAATTGCGAAGGTGCTGAGGATGTGGTACTCACTGTGAATTCTACGAAAAATTTTGGCACGACTTCGAACCCTGCTAACTCCTTGACATATCCTGGGGGAGTTCTTTGTGCCAAGGCATCCATGCTGCTCCAAAACGTGCCTCCTGCTGTGTTAGTTCGTTTCTTGAGAGAACACCGCTCAGAGTGGGCTGATTTCAACATTGATGCATACTCTGCAGCAACCCTTAAAGCCAATTCATACACATATCCAGGGATGAGACCCACAAGGTTTACCGGTAGCCAAATCATAATGCCACTCGGTCACACAATCGAGCACGAAGAGTTGCTTGAAGTAATCCGACTTGAAGGACATCCTATGGTACAAGAAGATGCTTTTGTTTCAAGGGATATTCATCTTCTTCAGATATGTAGTGGAATTGACGAGAATGCTGTTGGAGCTTGTTCAGAACTCATTTTTGCTCCTATTGATGAGATGTTTCCAGATGATGCACCATTGTTGCCTTCTGGCTTTCGAATCATCCCATTGGATTCCAGAACAAGTGATGCTAAAGGTAGTCAACGGACTCTGGATCTAACATCAAGTCTTGAAGTGGGTTCTGGAACAAGCAATACTGCTGGAGATGCATCATCAAGTCAGAGTGCTAGATCAGTCTTAACTATTGCATTCCAGTTTCCTTTTGAAAGTAGCATGCAGGATAATGTTGCGAATATGGCACATCAGTACGTACGTAGCGTCATCTCCTCGGTGCAGAGAGTTGCGATGGCCATATCTCCATCTGGGGGTGGTCCAGCTCTAGGTCCAAAGCTGTCTCCTGGTTCTCCAGAAGCTCTCACTCTAGCACATTGGATATGCAAAAGCTATAGTTTCCAATTAGGAACGGAGTTGATCAAGTCAGATTCCTTGGAAGGTGATTCCCTGTTGAAAAATCTCTGGAATCATCAGGATGCAATATTGTGCTGTTCCCTGAAGTCTCTGCCCGTTTTCCTGTTTGCCAACCAAGCTGGGCTTGACATGTTGGAGACAACTCTAGTAGCCTTACAAGACATCACATTGGACAAGATTTTCGACGAGTCGGGTCGAAAAGCTTTGTGTGCTGATTTCCCCAAGTTAATGCAGCAGGGATTTGCATACTTGCCTGGAGGAATCTGTGCATCAACAATGGGGCGACACGTTTCATATGAACAAGCTGTTGCATGGAAAGTCCTCGAGGCAGACGAAACAACAGTCCATTGCCTTGCCTTCTCATTCATAAACTGGTCTTTTGTTTGA 2526 46.79 MAMAIAHHRESSSGSITRHLDSSGKYVRYTSEQVEALERVYAECPKPSSLRRQQLVRDCPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVSQLVCENGFMRQQLHTVPAAATADASCDSVVTTPQPSRRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCGGVAARACGLVSLEPSKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTIELVYTQVYAPTTLAPARDFWTLRYTITLENGSLVVCERSLSGSGAGPSEAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWHVPEVLRPLYESSKVVAQKMTIAALRYVRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDNGWSLINCEGAEDVVLTVNSTKNFGTTSNPANSLTYPGGVLCAKASMLLQNVPPAVLVRFLREHRSEWADFNIDAYSAATLKANSYTYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHPMVQEDAFVSRDIHLLQICSGIDENAVGACSELIFAPIDEMFPDDAPLLPSGFRIIPLDSRTSDAKGSQRTLDLTSSLEVGSGTSNTAGDASSSQSARSVLTIAFQFPFESSMQDNVANMAHQYVRSVISSVQRVAMAISPSGGGPALGPKLSPGSPEALTLAHWICKSYSFQLGTELIKSDSLEGDSLLKNLWNHQDAILCCSLKSLPVFLFANQAGLDMLETTLVALQDITLDKIFDESGRKALCADFPKLMQQGFAYLPGGICASTMGRHVSYEQAVAWKVLEADETTVHCLAFSFINWSFV* 842
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11625569 11631747 + Chy11G193900.1 Chy11g00810 236571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00810 841 SMART HOX_1 22 88 IPR001356 GO:0003677
Chy11g00810 841 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 1 841 - -
Chy11g00810 841 Gene3D - 19 91 - -
Chy11g00810 841 ProSiteProfiles 'Homeobox' domain profile. 20 84 IPR001356 GO:0003677
Chy11g00810 841 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 841 IPR044830 GO:0003700
Chy11g00810 841 ProSiteProfiles START domain profile. 155 383 IPR002913 GO:0008289
Chy11g00810 841 SUPERFAMILY Bet v1-like 164 376 - -
Chy11g00810 841 Pfam MEKHLA domain 697 840 IPR013978 -
Chy11g00810 841 MobiDBLite consensus disorder prediction 599 629 - -
Chy11g00810 841 CDD START_ArGLABRA2_like 159 375 - -
Chy11g00810 841 SMART START_1 164 374 IPR002913 GO:0008289
Chy11g00810 841 Gene3D - 201 379 IPR023393 -
Chy11g00810 841 SUPERFAMILY Homeodomain-like 22 87 IPR009057 -
Chy11g00810 841 CDD bZIP 77 116 - -
Chy11g00810 841 Pfam START domain 165 373 IPR002913 GO:0008289
Chy11g00810 841 Pfam Homeodomain 25 83 IPR001356 GO:0003677
Chy11g00810 841 CDD homeodomain 25 85 IPR001356 GO:0003677
Chy11g00810 841 Coils Coil 80 121 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy11g00810 Chy12g00776 CCT
Chy11g00810 Chy12g00776 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00094 Chy-Chr2:600150 Chy11g00810 Chy-Chr11:11625569 0 dispersed
Chy11g00810 Chy-Chr11:11625569 Chy12g00385 Chy-Chr12:4527977 0 dispersed
Chy11g00810 Chy-Chr11:11625569 Chy12g00776 Chy-Chr12:12088691 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18711 PF01852 START 6.00E-47 CL0209 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00810 K09338 - csv:101215773 1656.73