Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00819 ATGGGTCACTTTCATAGTGGTGGTCGATGGGCTCTGTTCTGTTCTGTTTTCAACCTGATTCCAATTCTGAATATATCCAATCTATCAGCGGTCTCTGTCCACCATAAAATGAGGCATCAAGTGGCAGCCACCTTCCTTTCTTTAGTGGGTTTTATCTTGTTGCAACAAGTCATTTGTGCCGATACTTCTGATTTTTCTACCTCTGGCAACTGGACGTGTAGATGTTTTTCTCCACACCAAGAAAATCAGGAATTAACACTTGGTCCAAATTGTTCTACATCTTGTTCATGTACACAAGATGTTGAGGGAACTAGACTGTGGACATGCATGTGTTCAACTGATGGCTTCCCAAAAGTTGTAGCCAATAACCGCGATTCCAACTGTTTTACGTCATGCAACTGCACTTATGGACTTCTTCCGGAGTTGCCATATTCTAAAAGGCATATTTCAAGCAATGTAGTTGTGATTATTCTCTCACTATGTGTAATAATCATAACACTAGCATTCTTCATCTTAGTGATTTGCTATCTTTGTCAAAGGGACAAGTCCCGTGTTCGAGCTCCAATAATCTCATTAGATAAGCAAATTAGCTACAACAGCTTGACTAACCTAATTAGTCACAAGAGTTCTTCAACACCAGGTAGTAAGGTTATGATGGATTCTCCGGTGAATATCAAAGGATGTTTTTTCATGAACCAATGCTTGTTGAGAACTAAATCTAGAAGTTTGTGTGGGATCATCATCCAATTCTCGTACTCAGAGTTGGAAAATGCAACAGAAAAGTTTTCAAGCTCCCATCTTGTGGGGCGTGGGGGAAGTAGCTTTGTCTATCGTGGTGAATTGAGGGATGGTAGAACAGTGGCAGTAAAGCGGCTCAATATTCAAGGAGGACCGGATGTAGACTACTTGTTCTTAACAGAAATACAATTGTTATCAAGACTGAATCATTGTCACGTGGTGCCTCTACTTGGTTACTGCACAGAATCAAGAGGGAAACATACTGAAAGGCTTTTGGTATATGAATACATGCCAAAGGGTAATCTAAGAGACTGTTTGGATGGAGCTTCAGGGAAGAAAATGGATTGGAGTACTCGGGTTACAATTGCTTTAGGAGCTGCCAGAGGCTTGGAGTATCTTCATGAAGCAGCTGCTCCCAGAATTTTGCATAGAGATGTCAAGTCAACAAATATTCTTTTGGATATAGATTGGAGAGCAAAAATAACAGACCTTGGTATGGCTACAAGGTTAAGAGGTGATGATCTTCCTAGCTGTTCCAGTTCTCCTGCTAGAATGCAAGGGACTTTTGGTTATTTTGCACCGGAGTATGCAATTGTTGGAAGAGCCTCTTTGAAGTCTGATGTCTTTAGTTTTGGAGTGGTTCTTCTTGAGCTTATAACGGGTCAGCATCCCATCCATAAATCAGCTGGCAAAGGAGAGGAAAGCCTTGCAATATGGGCTGCTCCTCGGTTACAAAATAGTAGACGAGTTATAACGGAGTTACCGGACCCACATTTAGATGGAACTTTCCCGGAGGAAGAGTTGCAAATAATGGCTTATTTAGCAAAGGAGTGCTTGCTGTTGGATCCTGATGCTAGACCAACCATGACTGAAGTTGTTCAAGTTCTTTCAAATATAACTCCAGATAAATCAAGAAGGAATAACATTTCTGCAAACGTTTTTCAGGAGAGGCTGTCACCCTGTAGTGTGGAGAGTGAACCAGACATTGCAAATCACAACATGCGTCCTATAGGGAAACAAGTCCATACAGAGGTGATTGTTATGGATGAGATGATGGAAAGACAATCTTCATCCCGCAAATGGCTTGACCGCTATTCACTACCATTGGATATTGATCGTTCACTTTGTGCTGACAACTACGGCAACCAAGATATTGTTTCTTTTGAGAACATGAAAACACTCGTACCCTTTACTTCAAAGGGCAACAATCTCCAAGTTCAAGGCCCAGATGACGAAACGGTAGACTTGACTGAGCCACGGTTCGAGTCATTCTGCATTGTGAATGTCAAATCTTCCTCATAG 2040 41.57 MGHFHSGGRWALFCSVFNLIPILNISNLSAVSVHHKMRHQVAATFLSLVGFILLQQVICADTSDFSTSGNWTCRCFSPHQENQELTLGPNCSTSCSCTQDVEGTRLWTCMCSTDGFPKVVANNRDSNCFTSCNCTYGLLPELPYSKRHISSNVVVIILSLCVIIITLAFFILVICYLCQRDKSRVRAPIISLDKQISYNSLTNLISHKSSSTPGSKVMMDSPVNIKGCFFMNQCLLRTKSRSLCGIIIQFSYSELENATEKFSSSHLVGRGGSSFVYRGELRDGRTVAVKRLNIQGGPDVDYLFLTEIQLLSRLNHCHVVPLLGYCTESRGKHTERLLVYEYMPKGNLRDCLDGASGKKMDWSTRVTIALGAARGLEYLHEAAAPRILHRDVKSTNILLDIDWRAKITDLGMATRLRGDDLPSCSSSPARMQGTFGYFAPEYAIVGRASLKSDVFSFGVVLLELITGQHPIHKSAGKGEESLAIWAAPRLQNSRRVITELPDPHLDGTFPEEELQIMAYLAKECLLLDPDARPTMTEVVQVLSNITPDKSRRNNISANVFQERLSPCSVESEPDIANHNMRPIGKQVHTEVIVMDEMMERQSSSRKWLDRYSLPLDIDRSLCADNYGNQDIVSFENMKTLVPFTSKGNNLQVQGPDDETVDLTEPRFESFCIVNVKSSS* 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11719844 11726118 - Chy11G193990.1 Chy11g00819 236580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00819 679 SUPERFAMILY Protein kinase-like (PK-like) 245 542 IPR011009 -
Chy11g00819 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 387 399 IPR008271 GO:0004672|GO:0006468
Chy11g00819 679 Gene3D Transferase(Phosphotransferase) domain 1 343 565 - -
Chy11g00819 679 PANTHER OS01G0750732 PROTEIN 37 678 - -
Chy11g00819 679 CDD STKc_IRAK 268 545 - -
Chy11g00819 679 SMART serkin_6 262 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g00819 679 ProSiteProfiles Protein kinase domain profile. 262 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g00819 679 Pfam Protein kinase domain 264 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g00819 679 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE NCRK ISOFORM X1 37 678 - -
Chy11g00819 679 ProSitePatterns Protein kinases ATP-binding region signature. 268 290 IPR017441 GO:0005524
Chy11g00819 679 Gene3D Phosphorylase Kinase; domain 1 236 342 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g00819 Chy-Chr11:11719844 Chy07g01635 Chy-Chr7:20364310 5.56E-71 dispersed
Chy11g00819 Chy-Chr11:11719844 Chy10g00613 Chy-Chr10:12711144 1.11E-70 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71548 PF00069 Pkinase 5.80E-43 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00819 - - csv:101217673 1273.84