Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g00821 ATGGAACCCACCACCTGCTACACTAATGGCCACGCTTCAATGGTGGATCCCTTTTGCCTGAAAGATCCCTTGTACTGGGCCGCCGCCGCTGATGGGCTTAAAGGGAGTCACCTCGACGAGGTGAAGAAAATGGTGGACGAGTACCGGCGTGGGGTGGTGCGCCTTGGCGGAGAGAGTTTGACTATTGGGCAGGTGGCGGCTGTGGCCTTGAACGACGGCGGAGTTAAGGTGGAACTGAATGAGGCAGCGAGAGAGGGAGTTAAGGCGAGCAGTGATTGGGTAATGGAGAGTATGAAGAAAGGTACGGATAGCTACGGAGTTACTACTGGATTTGGTGCAACCTCCCATCGGAGAACAAATCAAGGAGCTGCTCTGCAGAAGGAGCTTATTCGATTCCTGAACGCTGGGATATTTGGGAATGGAACAGAGTCCAACCACACGTTGCCTCACACTGCTACAAGAGCTGCTATGTTAGTCAGAATCAATACTCTTCTTCAAGGTTATTCTGGTATTAGATTTGAAATTTTGGAGTCTATTACAAAGCTCCTTAACCACAATGTCACACCTTGCCTTCCCTTGCGAGGCACTATCACGGCTTCCGGTGATTTGGTTCCTTTTTCTTACATCGCTGGTTTTTTGACTGGTCGTCCTAATGCCAAGGCTGTTGGCCCAACTGGTGATCTCCTTGATGCTGGAGCAGCTTTTAAACTCGCTGGCATTGATGGTGGATTCTTTGAGTTGCAGCCTAAAGAGGGTCTTGCGCTTGTTAATGGGACGGGTGTTGGATCTGGTTTGGCGTCTATTGTGTTGTTCGAGGCCAATGTATTGGCTTTGTTATCCGAGGTTATTTCAGCCATCTTTGCTGAAGTGATGCAAGGGAAGCCTGAGTTTACTGATCATTTAACTCACAAATTGAAACATCATCCTGGTCAAATCGAAGCAGCTGCCATTATGGAACACCTTTTGGATGGAAGTGCTTTCGTAAAAGATGCTAAGAGGTTACATGAGGTGGACCCTCTTCAAAAGCCGAAACAAGATCGTTATGCTCTTCGAACTTCACCTCAATGGTTAGGCCCTCAAATTGAGGTGATTCGACATTCAACAAAATCGATTGAGAGAGAGATCAACTCGGTAAATGACAATCCATTGATTGATGTTTCAAGAAATAAAGCTCTACATGGAGGCAATTTTCAAGGAACTCCAATTGGAGTGTCCATGGATAATACTAGATTGGCTCTGGCTTCTATCGGAAAGCTTTTGTTTGCTCAATTCTCCGAACTCGTGAATGATTTTTATAACAATGGATTGCCTTCAAATCTTTCTGGAGGAAGTAATCCAAGCTTGGATTATGGATTTAAAGGCGCCGAAATCGCCATGGCTTCCTATTGCTCAGAATTACAATACTTAGCAAATCCGGTCACCAATCATGTTCAAAGTGCAGAACAACACAACCAAGACGTGAATTCATTGGGTCTAATCTCATCAAGAAAAACAGCTGAGGCAACAGATATCTTGAAGCTAATGAGCACAACATTCCTAGTGGCTCTCTGCCAAGCCATAGATTTGAGACACGTAGAGGAGAATCTGAAAAGCACAGTGAAAAACACCGTGAGTCAAGTCGCCAAGAAGGTTTTAACCATTGGAGTAAATGGAGAGCTTCATCCATCAAGATTCTGTGAGAAAGATTTGCTGAAAGTCATTGATAGAGAACATTGTTTTGCTTACATTGATGATCCATGCAGCATGACATATCCATTAATGCAAAAACTAAGGCAAGTTCTTGTAGAACATGCATTGAAGAACAATGATGATCTGAAGAATTCAAACTCCTCAATCTTTCTAAAGATCGGAGCTTTTGAGGAAGAACTGAAAACCCTTTTGCCTAAAGAAGTAGAAAGTGGAAGACAAGCCATTTCAAAAGGAAAAGCAACAATTCCCAACAAGATAAAGGATTGCAGATCATACCCAATTTACAGATTTGTCAGAGAAGAATTGGGAACTGATATGTTGACAGGTGAAAAGGTGAAATCTCCTGGGGAAGAATTTGACAAAGTTTTTAGTGCAATTTGTGAAGGGAAAATCATTGATCCTTTGCTCGAATGCCTTCACAGTTGGAATGGGACTCCTCTTCCTATAAATTGA 2142 43.56 MEPTTCYTNGHASMVDPFCLKDPLYWAAAADGLKGSHLDEVKKMVDEYRRGVVRLGGESLTIGQVAAVALNDGGVKVELNEAAREGVKASSDWVMESMKKGTDSYGVTTGFGATSHRRTNQGAALQKELIRFLNAGIFGNGTESNHTLPHTATRAAMLVRINTLLQGYSGIRFEILESITKLLNHNVTPCLPLRGTITASGDLVPFSYIAGFLTGRPNAKAVGPTGDLLDAGAAFKLAGIDGGFFELQPKEGLALVNGTGVGSGLASIVLFEANVLALLSEVISAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHLLDGSAFVKDAKRLHEVDPLQKPKQDRYALRTSPQWLGPQIEVIRHSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLLFAQFSELVNDFYNNGLPSNLSGGSNPSLDYGFKGAEIAMASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEATDILKLMSTTFLVALCQAIDLRHVEENLKSTVKNTVSQVAKKVLTIGVNGELHPSRFCEKDLLKVIDREHCFAYIDDPCSMTYPLMQKLRQVLVEHALKNNDDLKNSNSSIFLKIGAFEEELKTLLPKEVESGRQAISKGKATIPNKIKDCRSYPIYRFVREELGTDMLTGEKVKSPGEEFDKVFSAICEGKIIDPLLECLHSWNGTPLPIN* 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11759326 11763106 + Chy11G194010.1 Chy11g00821 236582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g00821 713 CDD PAL-HAL 58 523 IPR001106 -
Chy11g00821 713 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 22 702 IPR005922 GO:0005737|GO:0006559|GO:0016841
Chy11g00821 713 PANTHER HISTIDINE AMMONIA-LYASE 1 713 IPR001106 -
Chy11g00821 713 Gene3D Fumarase/aspartase (Central domain) 261 707 - -
Chy11g00821 713 Pfam Aromatic amino acid lyase 60 535 IPR001106 -
Chy11g00821 713 Gene3D - 526 647 IPR023144 -
Chy11g00821 713 Gene3D - 16 259 IPR024083 -
Chy11g00821 713 PANTHER AMMONIA-LYASE, PUTATIVE-RELATED 1 713 - -
Chy11g00821 713 SUPERFAMILY L-aspartase-like 22 712 IPR008948 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00848 Chy-Chr8:15971588 Chy11g00821 Chy-Chr11:11759326 0 dispersed
Chy08g00849 Chy-Chr8:15975795 Chy11g00821 Chy-Chr11:11759326 0 dispersed
Chy11g00821 Chy-Chr11:11759326 Chy08g00844 Chy-Chr8:15943078 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g00821 K10775 - csv:101218156 1402.11