Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g00891 | ATGACTACATTAGCCAGTACTTCTGAAATTGTTGAGTCAACAGAGGAATTTGATTCTGAGAAAGCTGGGACGAGTTACGGGCTAGATGTAGGAAAAAAGTTTTCTATAGAGGATGACATTAATCGTTTGTTTCAAGCAATTGATATCAGATCCTTACGCAAGAGGTCAGGCCAACAACGGGAAGCTGATAAAGATGCTTTGCGAAAGAGTGCAATGAAAAGACCAGTTAGAGTAGGTCCGTCTCACATGGCAGGGATTGGAATTTCTGAGCCCGCGAGTTTAAAGCAGGCTTTGAGGGGCTTATGTATTTCCCAGGCTGCAGAAATGGCTGCTTCAAAGAGGTTAACAAGGTCTGTAGCTTCACCCAGAATCTCTGAAGCTGGAACTATCAAAAGATTGTATAGGGCTGTGGTGGTTGAGGCCAATGGATTTGGTGTGCCTGTAAATGAAAGTAAAGCAAATTTGGTAGAAATTTCCATTGTTTCAGAAAGACTTATGTCAACTTTTCAAAATAAGATGCCTGAATTATTGCATAAAAACGAGGCTGATATACCAAACCAAGGAGCTGAATCTTCTTCTTTCAAGAATACTGGGGTATCAGAAGAGGCGAGTGTGGATAGATTGATGTCAAAGGATCCTATAGTTAATACAGCTACTGAGGTGACAAGTATAGAGCCACCTGGTGAGGTGGGAAAACTTAAATCTCCTTCCTTTACTCCTGGTGAGAAGGATCTGGCTGCGAACAGCATGGCCATTTCCTCAAATGAAGATTTGACAAGAAATTCAGTGCCAGAGAAGGAGAAAGGTACAATGAGTTGTTTATCTTCTCTATCAAGCTCTGGATCTGCTGTCAGGCCGAACAAAACAGCTTTCAGTAATACACGTTTCATCAAACCTATTTTCAGGACCAAGAATTTTGTCAAGAAGAAAGCAAAACTTGAACCAAATTCCTCTCCTGGTATATTTGATGTCTGCACAGTAAATGCTGACACTAATTTGGGTACCATTGCAGAAAAGTCTGAGAATCAGATGCCAGAAAATGCACAACTTCATGAGATTAAAGAAGAAGATATAGGTTCTTCTGTCTCATGTAACATAACTTTAGGTGTTGAAGTGAGTGGAAATGTGGTAAACACAGAATCTAGTAGACCTGGTACATCTCTCAACTGCTTTAACAGGAATAGACCAACTATTATGGCATCTGATGAGAGATCCAGATCAAGAGAGAAAGGGATGTTCTCTCAGAGCTCTAAAAGTAGTGTTGGTGAATGTAGCAGTAGCCCAAGCATCAGTGGGGAAAGTATTCTCAGTGGATCGAGTCGTAGTGGAGTTAGGCCTCACATGTCAAAGGACTTGAAATGGGAAGCTATCCACAACCTTCAGGATCAACATAAATGCCTAGGTTCGAGAAACTTCAAGTTGCTTAGGAGACTTGGTCTTGGGGATATTGGGACTGTGTATCTCTCTGAGCTTTGTGATTCAAGCTGTCTTTTTGCTATGAAAGTGATGGATAAGGAGTTCTTGGAAAGCAGAAAAAAACTTCTTCGAGCACAAACTGAGAGAGAGATACTGCAAATGCTTGATCATCCATTTCTCCCTACATTATATGTGCATTTTGAGACGGATAAGCACTTGTGCTTGGTCATGGACTACTGTCCCGGTGGAGATCTCCATGTACTGCGTCAGAAGCAACCAAGCAAGAGTTTCTCTGAGCGTGCAGTCAGGTTCTATGTTGCCGAAGTTCTTCTTGCACTGGAGTACTTACACATGCTAGGAGTTGTTTACCGAGACTTGAAACCTGAAAACGTCCTGGTTCGAGAAGATGGGCACATCATGCTCACAGACTTCGATTTGTCCCTTAGATGTGCTGTTAACCCAACGCTGCTTCAATCATCATCTCCAATTGTGGAATCCACTAAGAGGACATTGAATCCTTGTGATGAATCTAGTTGCATTGACCCTTTCTGCCTCCATCCATCCTGGCAGGTTTCATGCTTCACTCCCAAAGTTCTATCTGCTCCATACAAATCCCGGAGAACAAAAGCAGATCATCAGGCTAGTCTATTACCACAGCTTATAGTCGAACCAACTGGTGCGCGGTCGAATTCATTTGTAGGAACCCATGAATACCTCGCCCCTGAGATTGTCAAGGGCGAAAGCCACGGGAGCGCTGTTGATTGGTGGACATATGGGATTTTCCTGTTTGAGCTACTCTACGGTAGGACTCCCTTCAAAGGTTCTGCAAACGAGGACACATTAACGAACATAGTATCCCAAACTCTCAAGTTCCCTGATTGCCCATTAGTTAGTTTTCATGCAAGAGACCTGCTCAGATGTCTGCTGACAAAGGAGCCTGAAAACCGATTAGGCTCGACAAAAGGAGCTGTTGAGATTAAGCAGCACCCGTTTTTTGAAGGCCTCAATTGGGCTCTGATACGTTGTGCAACACCACCTGAGCTTCCCAAGTTTTTCGACGGTGCAACTAGTACAATGCCAATAGATTCTGGGGAGAATACAAAGCGTAGAGATCTCGAAAATATTGAAACGGATGCAGCAATGTTCGACCTGTTTTAG | 2574 | 43.05 | MTTLASTSEIVESTEEFDSEKAGTSYGLDVGKKFSIEDDINRLFQAIDIRSLRKRSGQQREADKDALRKSAMKRPVRVGPSHMAGIGISEPASLKQALRGLCISQAAEMAASKRLTRSVASPRISEAGTIKRLYRAVVVEANGFGVPVNESKANLVEISIVSERLMSTFQNKMPELLHKNEADIPNQGAESSSFKNTGVSEEASVDRLMSKDPIVNTATEVTSIEPPGEVGKLKSPSFTPGEKDLAANSMAISSNEDLTRNSVPEKEKGTMSCLSSLSSSGSAVRPNKTAFSNTRFIKPIFRTKNFVKKKAKLEPNSSPGIFDVCTVNADTNLGTIAEKSENQMPENAQLHEIKEEDIGSSVSCNITLGVEVSGNVVNTESSRPGTSLNCFNRNRPTIMASDERSRSREKGMFSQSSKSSVGECSSSPSISGESILSGSSRSGVRPHMSKDLKWEAIHNLQDQHKCLGSRNFKLLRRLGLGDIGTVYLSELCDSSCLFAMKVMDKEFLESRKKLLRAQTEREILQMLDHPFLPTLYVHFETDKHLCLVMDYCPGGDLHVLRQKQPSKSFSERAVRFYVAEVLLALEYLHMLGVVYRDLKPENVLVREDGHIMLTDFDLSLRCAVNPTLLQSSSPIVESTKRTLNPCDESSCIDPFCLHPSWQVSCFTPKVLSAPYKSRRTKADHQASLLPQLIVEPTGARSNSFVGTHEYLAPEIVKGESHGSAVDWWTYGIFLFELLYGRTPFKGSANEDTLTNIVSQTLKFPDCPLVSFHARDLLRCLLTKEPENRLGSTKGAVEIKQHPFFEGLNWALIRCATPPELPKFFDGATSTMPIDSGENTKRRDLENIETDAAMFDLF* | 858 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12313870 | 12316865 | - | Chy11G194710.1 | Chy11g00891 | 236652 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g00891 | 857 | MobiDBLite | consensus disorder prediction | 55 | 74 | - | - | |
Chy11g00891 | 857 | Gene3D | Transferase(Phosphotransferase) domain 1 | 699 | 822 | - | - | |
Chy11g00891 | 857 | ProSiteProfiles | Protein kinase domain profile. | 472 | 804 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g00891 | 857 | SMART | serkin_6 | 472 | 804 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g00891 | 857 | Gene3D | Phosphorylase Kinase; domain 1 | 471 | 551 | - | - | |
Chy11g00891 | 857 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Chy11g00891 | 857 | CDD | STKc_phototropin_like | 472 | 827 | - | - | |
Chy11g00891 | 857 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 593 | 605 | IPR008271 | GO:0004672|GO:0006468 | |
Chy11g00891 | 857 | SUPERFAMILY | Protein kinase-like (PK-like) | 450 | 824 | IPR011009 | - | |
Chy11g00891 | 857 | MobiDBLite | consensus disorder prediction | 55 | 72 | - | - | |
Chy11g00891 | 857 | Pfam | Protein kinase domain | 473 | 622 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g00891 | 857 | Pfam | Protein kinase domain | 701 | 804 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g00891 | 857 | PANTHER | FLIPPASE KINASE 1-RELATED | 1 | 834 | - | - | |
Chy11g00891 | 857 | MobiDBLite | consensus disorder prediction | 412 | 444 | - | - | |
Chy11g00891 | 857 | MobiDBLite | consensus disorder prediction | 401 | 444 | - | - | |
Chy11g00891 | 857 | Gene3D | Transferase(Phosphotransferase) domain 1 | 552 | 620 | - | - | |
Chy11g00891 | 857 | PANTHER | SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1 | 1 | 834 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy11g00891 | Chy-Chr11:12313870 | Chy12g00620 | Chy-Chr12:8912134 | 0 | dispersed | |
Chy11g01288 | Chy-Chr11:19049688 | Chy11g00891 | Chy-Chr11:12313870 | 9.92E-103 | dispersed | |
Chy11g00891 | Chy-Chr11:12313870 | Chy11g00892 | Chy-Chr11:12325614 | 3.09E-137 | tandem | |
Chy06g00018 | Chy-Chr6:114943 | Chy11g00891 | Chy-Chr11:12313870 | 6.39E-55 | transposed | |
Chy12g00368 | Chy-Chr12:4176145 | Chy11g00891 | Chy-Chr11:12313870 | 1.40E-127 | transposed | |
Chy11g00891 | Chy-Chr11:12313870 | Chy08g00920 | Chy-Chr8:16632692 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71551 | PF00069 | Pkinase | 4.00E-37 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g00891 | - | - | csv:101206786 | 1612.43 |